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RunChecks.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master, workflow_test]
pull_request:
branches: [main, master, workflow_test]
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ubuntu-latest
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: ubuntu-latest, r: '4.3'}
- {os: ubuntu-latest, r: '4.2'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
use-public-rspm: true
- name: Download mocked binaries
run: |
mkdir -p /usr/local/bin
cd /tmp
gh release download "sinfo/v0.2.0" -R a2-ai-tech-training/slurm-mocks -p "*Linux_x86_64.tar.gz" -D /usr/local/bin/
tar -xvf /usr/local/bin/sinfo_Linux_x86_64.tar.gz
mv ./sinfo /usr/local/bin/sinfo
chmod +x /usr/local/bin/sinfo
gh release download "sacct/v0.2.0" -R a2-ai-tech-training/slurm-mocks -p "*Linux_x86_64.tar.gz" -D /usr/local/bin/
tar -xvf /usr/local/bin/sacct_Linux_x86_64.tar.gz
mv ./sacct /usr/local/bin/sacct
chmod +x /usr/local/bin/sacct
echo "/usr/local/bin" >> $GITHUB_PATH
Rscript -e 'if (!requireNamespace("processx", quietly = TRUE)) install.packages("processx"); processx::run("sinfo")'
Rscript -e 'processx::run("sacct")'
env:
GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: |
metrumresearchgroup/mrgmisc
metrumresearchgroup/nmrec
metrumresearchgroup/bbr
any::rcmdcheck
needs: check
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true