diff --git a/vignettes/custom-alerts.Rmd b/vignettes/custom-alerts.Rmd index ff8c9fc..587b8ce 100644 --- a/vignettes/custom-alerts.Rmd +++ b/vignettes/custom-alerts.Rmd @@ -40,7 +40,7 @@ options('slurmtools.submission_root' = file.path(nonmem, "submission-log")) ## Submitting a NONMEM job with nmm Instead of using bbi we can use `nmm` ([NONMEM -Monitor](https://github.com/A2-ai/nonmem-monitor)) which currently has +Monitor](https://github.com/A2-ai/nonmem-monitor/releases)) which currently has some additional functionality of sending notifications about zero gradients, missing -1E9 lines in ext file, and some very basic control stream errors. Nonmem-monitor also allows for setting up an alerter to diff --git a/vignettes/slack-alerts.Rmd b/vignettes/slack-alerts.Rmd index c67c454..1024fc4 100644 --- a/vignettes/slack-alerts.Rmd +++ b/vignettes/slack-alerts.Rmd @@ -49,14 +49,16 @@ if (file.exists(file.path(nonmem, paste0(mod_number, ".yaml")))) { # Cut me some Slack -There is also functionality to pair `nmm` with +There is also functionality to pair [`nmm`](https://github.com/A2-ai/nonmem-monitor/releases) with [slack_notifier](https://github.com/A2-ai/slack_notifier/releases/) and get messages sent directly to you via a slack bot. This requires you to download the slack_notifier binaries. You can download the latest release and extract the binary and again save it to `~/.local/bin`. -```{r} +``` r Sys.which("snt") + snt +"/cluster-data/user-homes/matthews/.local/bin/snt" ``` `snt` requires the slack bot OAuth token which is found from