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Can PLINK v1.7 handle large datasets? #29

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richelbilderbeek opened this issue Oct 8, 2021 · 0 comments

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richelbilderbeek commented Oct 8, 2021

Using

  # There are hints that PLINK v1.7 cannot handle this
  t <- plinkr::compare_assoc_qt_speed(
    n_individuals = 1000,
    n_phenotypes = 100,
    n_snps_per_phenotype = 1000,
    plink_optionses = list(plinkr::create_plink_v1_7_options()),
    verbose = TRUE
  )

I created this file: http://richelbilderbeek.nl/big_plink_text.zip

Can PLINK v1.7 handle it?

The text was updated successfully, but these errors were encountered:

richelbilderbeek changed the title ~~Can PLINK v1.7 handle~~ Can PLINK v1.7 handle large datasets?

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