From 1a23aa027d78a49b15a43499e6f22c49f9589c6f Mon Sep 17 00:00:00 2001
From: fengyvoid <fengyvoid@gmail.com>
Date: Fri, 11 Oct 2024 14:13:11 -0500
Subject: [PATCH] EventBuilderV2 tool chain

---
 .../EventBuilderV2/DefaultTriggerMask.txt     | 10 +++++
 configfiles/EventBuilderV2/EBLAPPDConfig      |  7 ++++
 configfiles/EventBuilderV2/EBLoadRawConfig    | 10 +++++
 configfiles/EventBuilderV2/EBMRDConfig        |  5 +++
 configfiles/EventBuilderV2/EBPMTConfig        |  5 +++
 configfiles/EventBuilderV2/EBSaverConfig      | 10 +++++
 .../EventBuilderV2/EBTriggerGrouperConfig     | 28 +++++++++++++
 .../EventBuilderV2/LAPPDLoadStoreConfig       | 39 +++++++++++++++++++
 .../EventBuilderV2/MRDDataDecoderConfig       |  2 +
 .../EventBuilderV2/PMTDataDecoderConfig       |  5 +++
 .../EventBuilderV2/PhaseIIADCCalibratorConfig | 15 +++++++
 .../EventBuilderV2/PhaseIIADCHitFinderConfig  | 10 +++++
 .../EventBuilderV2/SaveConfigInfoConfig       |  3 ++
 configfiles/EventBuilderV2/ToolChainConfig    | 23 +++++++++++
 configfiles/EventBuilderV2/ToolsConfig        | 24 ++++++++++++
 .../EventBuilderV2/TriggerDataDecoderConfig   |  3 ++
 configfiles/EventBuilderV2/my_files.txt       |  2 +
 17 files changed, 201 insertions(+)
 create mode 100644 configfiles/EventBuilderV2/DefaultTriggerMask.txt
 create mode 100644 configfiles/EventBuilderV2/EBLAPPDConfig
 create mode 100644 configfiles/EventBuilderV2/EBLoadRawConfig
 create mode 100644 configfiles/EventBuilderV2/EBMRDConfig
 create mode 100644 configfiles/EventBuilderV2/EBPMTConfig
 create mode 100644 configfiles/EventBuilderV2/EBSaverConfig
 create mode 100644 configfiles/EventBuilderV2/EBTriggerGrouperConfig
 create mode 100644 configfiles/EventBuilderV2/LAPPDLoadStoreConfig
 create mode 100644 configfiles/EventBuilderV2/MRDDataDecoderConfig
 create mode 100644 configfiles/EventBuilderV2/PMTDataDecoderConfig
 create mode 100644 configfiles/EventBuilderV2/PhaseIIADCCalibratorConfig
 create mode 100644 configfiles/EventBuilderV2/PhaseIIADCHitFinderConfig
 create mode 100644 configfiles/EventBuilderV2/SaveConfigInfoConfig
 create mode 100644 configfiles/EventBuilderV2/ToolChainConfig
 create mode 100644 configfiles/EventBuilderV2/ToolsConfig
 create mode 100644 configfiles/EventBuilderV2/TriggerDataDecoderConfig
 create mode 100644 configfiles/EventBuilderV2/my_files.txt

diff --git a/configfiles/EventBuilderV2/DefaultTriggerMask.txt b/configfiles/EventBuilderV2/DefaultTriggerMask.txt
new file mode 100644
index 000000000..398850355
--- /dev/null
+++ b/configfiles/EventBuilderV2/DefaultTriggerMask.txt
@@ -0,0 +1,10 @@
+#Triggers are given by Jonathan; place one number per line. Values are index + 1
+#4+1: Delayed beam.  32+1: LED trigger. 34+1: AmBe and Cosmic trigger.  35+1: MRD_CR_Trigger. 30+1: LED_Start. 45+1, 46+1: Laser. 14+1: AmBe external trigger
+5
+15
+36
+31
+33
+35
+46
+47
diff --git a/configfiles/EventBuilderV2/EBLAPPDConfig b/configfiles/EventBuilderV2/EBLAPPDConfig
new file mode 100644
index 000000000..b6981cdec
--- /dev/null
+++ b/configfiles/EventBuilderV2/EBLAPPDConfig
@@ -0,0 +1,7 @@
+verbosityEBLAPPD 5
+matchTargetTrigger 14
+matchTolerance_ns 400000
+#matchTolerance_ns 10000
+exePerMatch 500
+
+matchToAllTriggers 0
diff --git a/configfiles/EventBuilderV2/EBLoadRawConfig b/configfiles/EventBuilderV2/EBLoadRawConfig
new file mode 100644
index 000000000..083ae9111
--- /dev/null
+++ b/configfiles/EventBuilderV2/EBLoadRawConfig
@@ -0,0 +1,10 @@
+verbosityEBLoadRaw 2
+ReadTriggerOverlap 1
+
+InputFile ./configfiles/EventBuilderV2/my_files.txt
+
+LoadPMT 1
+LoadMRD 1
+LoadCTC 1
+LoadLAPPD 1
+
diff --git a/configfiles/EventBuilderV2/EBMRDConfig b/configfiles/EventBuilderV2/EBMRDConfig
new file mode 100644
index 000000000..9ad287f6a
--- /dev/null
+++ b/configfiles/EventBuilderV2/EBMRDConfig
@@ -0,0 +1,5 @@
+verbosityEBMRD 1
+matchTargetTrigger 8
+matchTolerance_ns 3000000
+matchToAllTriggers 0
+exePerMatch 300
\ No newline at end of file
diff --git a/configfiles/EventBuilderV2/EBPMTConfig b/configfiles/EventBuilderV2/EBPMTConfig
new file mode 100644
index 000000000..ffe10668d
--- /dev/null
+++ b/configfiles/EventBuilderV2/EBPMTConfig
@@ -0,0 +1,5 @@
+verbosityEBPMT 1
+matchTargetTrigger 5
+#matchTargetTrigger 46
+matchTolerance_ns 100
+matchToAllTriggers 1
diff --git a/configfiles/EventBuilderV2/EBSaverConfig b/configfiles/EventBuilderV2/EBSaverConfig
new file mode 100644
index 000000000..bb1637547
--- /dev/null
+++ b/configfiles/EventBuilderV2/EBSaverConfig
@@ -0,0 +1,10 @@
+verbosityEBSaver 4
+
+savePMT 1
+saveMRD 1
+saveCTC 1
+saveLAPPD 1
+saveRunInfo 1
+saveBeamInfo 1
+
+beamInfoFileName beamfetcher_tree.root
diff --git a/configfiles/EventBuilderV2/EBTriggerGrouperConfig b/configfiles/EventBuilderV2/EBTriggerGrouperConfig
new file mode 100644
index 000000000..f5328aaa4
--- /dev/null
+++ b/configfiles/EventBuilderV2/EBTriggerGrouperConfig
@@ -0,0 +1,28 @@
+verbosityEBTG 5
+GroupMode beam
+GroupTolerance 3000000
+GroupTrigWord 14 //undelayed beam
+
+groupBeam 1
+BeamTolerance 25000000
+
+groupCosmic 1
+CosmicTriggerMain 36
+
+groupLaser 1
+LaserTolerance 10000
+
+groupLED 1
+#LEDTriggerMain 31
+#LEDTolerance 10000
+
+groupAmBe 1
+AmBeTolerance 10000 # 10us for testing
+AmBeTriggerMain 11
+
+groupPPS 0
+
+groupNuMI 1
+
+maxNumAllowedInBuffer 30000
+
diff --git a/configfiles/EventBuilderV2/LAPPDLoadStoreConfig b/configfiles/EventBuilderV2/LAPPDLoadStoreConfig
new file mode 100644
index 000000000..daa420ebe
--- /dev/null
+++ b/configfiles/EventBuilderV2/LAPPDLoadStoreConfig
@@ -0,0 +1,39 @@
+ General Parameters
+Nsamples 256 #Number of samples in a waveform
+SampleSize 100 #Sample size for baseline substraction
+TrigChannel 5 #Specified channel the trigger signal will be on
+NUM_VECTOR_METADATA 103 #Fixed META vector size
+LAPPDchannelOffset 1000
+NChannels 30
+
+LAPPDStoreReadInVerbosity 0
+
+mergingModeReadIn 0
+RawDataInputWavLabel RawWaveform
+RawDataOutputWavLabel  RawLAPPDData
+BoardIndexLabel BoardIndex #Label of the vector of read out boards
+
+PsecReceiveMode 1
+stopEntries 10000000000
+
+DoPedSubtraction 0
+Nboards 6 #Number of pedestal files to be read in
+PedinputfileTXT ../Pedestals/Laser2024Feb/P
+PSECinputfile /pnfs/annie/persistent/processed/LAPPD40Merged/FinalVersion_withRawTS/FilteredData_PMT_MRDtrack_noveto_15mV_7strips_3xxx_104
+
+
+Pedinputfile1 ../Pedestals/PEDS_ACDC_board0.txt
+Pedinputfile2 ../Pedestals/PEDS_ACDC_board1.txt
+
+
+ReadStore 0
+num_vector_data 7795
+num_vector_pps 16
+OutputWavLabel RawLAPPDData
+SelectSingleLAPPD false
+SelectedLAPPD 0
+loadPSEC 1
+loadPPS 1
+loadOffsets 1
+
+
diff --git a/configfiles/EventBuilderV2/MRDDataDecoderConfig b/configfiles/EventBuilderV2/MRDDataDecoderConfig
new file mode 100644
index 000000000..d9937ca9a
--- /dev/null
+++ b/configfiles/EventBuilderV2/MRDDataDecoderConfig
@@ -0,0 +1,2 @@
+verbosity 0
+DaylightSavingsSpring 1
diff --git a/configfiles/EventBuilderV2/PMTDataDecoderConfig b/configfiles/EventBuilderV2/PMTDataDecoderConfig
new file mode 100644
index 000000000..cca7bb6b5
--- /dev/null
+++ b/configfiles/EventBuilderV2/PMTDataDecoderConfig
@@ -0,0 +1,5 @@
+verbosity 1
+ADCCountsToBuildWaves 0
+Mode Offline
+OffsetVME03 0
+OffsetVME01 0
diff --git a/configfiles/EventBuilderV2/PhaseIIADCCalibratorConfig b/configfiles/EventBuilderV2/PhaseIIADCCalibratorConfig
new file mode 100644
index 000000000..158dc6ed1
--- /dev/null
+++ b/configfiles/EventBuilderV2/PhaseIIADCCalibratorConfig
@@ -0,0 +1,15 @@
+# PhaseIIADCCalibrator config file
+
+verbosity 0
+
+BaselineEstimationType ze3ra_multi
+NumBaselineSamples 15
+NumSubWaveforms 10
+
+SamplesPerBaselineEstimate 2000
+BaselineUncertaintyTolerance 2
+PCritical 0.01
+MakeCalLEDWaveforms 0
+
+EventBuilding 1
+ExecutesPerBuild 10
diff --git a/configfiles/EventBuilderV2/PhaseIIADCHitFinderConfig b/configfiles/EventBuilderV2/PhaseIIADCHitFinderConfig
new file mode 100644
index 000000000..d183b7b27
--- /dev/null
+++ b/configfiles/EventBuilderV2/PhaseIIADCHitFinderConfig
@@ -0,0 +1,10 @@
+verbosity 0
+
+UseLEDWaveforms 0
+
+PulseFindingApproach threshold
+PulseWindowType dynamic
+DefaultADCThreshold 7
+DefaultThresholdType relative
+
+EventBuilding 1
diff --git a/configfiles/EventBuilderV2/SaveConfigInfoConfig b/configfiles/EventBuilderV2/SaveConfigInfoConfig
new file mode 100644
index 000000000..569dcf758
--- /dev/null
+++ b/configfiles/EventBuilderV2/SaveConfigInfoConfig
@@ -0,0 +1,3 @@
+verbosity 5
+OutFileName config_info.txt
+FullDepth 0
diff --git a/configfiles/EventBuilderV2/ToolChainConfig b/configfiles/EventBuilderV2/ToolChainConfig
new file mode 100644
index 000000000..b661e1dfd
--- /dev/null
+++ b/configfiles/EventBuilderV2/ToolChainConfig
@@ -0,0 +1,23 @@
+#ToolChain dynamic setup file
+
+##### Runtime Paramiters #####
+verbose 1
+error_level 0 # 0= do not exit, 1= exit on unhandeled errors only, 2= exit on unhandeled errors and handeled errors
+attempt_recover 1
+
+###### Logging #####
+log_mode Interactive # Interactive=cout , Remote= remote logging system "serservice_name Remote_Logging" , Local = local file log;
+log_local_path ./log
+log_service LogStore
+
+###### Service discovery #####
+service_publish_sec -1
+service_kick_sec -1
+
+##### Tools To Add #####
+Tools_File ./configfiles/EventBuilderV2/ToolsConfig
+
+##### Run Type #####
+Inline -1
+Interactive 0
+
diff --git a/configfiles/EventBuilderV2/ToolsConfig b/configfiles/EventBuilderV2/ToolsConfig
new file mode 100644
index 000000000..007d55c76
--- /dev/null
+++ b/configfiles/EventBuilderV2/ToolsConfig
@@ -0,0 +1,24 @@
+LoadGeometry LoadGeometry ./configfiles/LoadGeometry/LoadGeometryConfig
+EBLoadRaw EBLoadRaw ./configfiles/EventBuilderV2/EBLoadRawConfig
+
+
+PMTDataDecoder PMTDataDecoder ./configfiles/EventBuilderV2/PMTDataDecoderConfig
+MRDDataDecoder MRDDataDecoder ./configfiles/EventBuilderV2/MRDDataDecoderConfig
+TriggerDataDecoder TriggerDataDecoder ./configfiles/EventBuilderV2/TriggerDataDecoderConfig
+LAPPDLoadStore LAPPDLoadStore ./configfiles/EventBuilderV2/LAPPDLoadStoreConfig
+
+
+PhaseIIADCCalibrator PhaseIIADCCalibrator ./configfiles/EventBuilderV2/PhaseIIADCCalibratorConfig
+PhaseIIADCHitFinder PhaseIIADCHitFinder ./configfiles/EventBuilderV2/PhaseIIADCHitFinderConfig
+
+
+EBTriggerGrouper EBTriggerGrouper ./configfiles/EventBuilderV2/EBTriggerGrouperConfig
+EBPMT EBPMT ./configfiles/EventBuilderV2/EBPMTConfig
+EBMRD EBMRD ./configfiles/EventBuilderV2/EBMRDConfig
+EBLAPPD EBLAPPD ./configfiles/EventBuilderV2/EBLAPPDConfig
+
+SaveConfigInfo SaveConfigInfo ./configfiles/EventBuilderV2/SaveConfigInfoConfig
+
+EBSaver EBSaver ./configfiles/EventBuilderV2/EBSaverConfig
+
+
diff --git a/configfiles/EventBuilderV2/TriggerDataDecoderConfig b/configfiles/EventBuilderV2/TriggerDataDecoderConfig
new file mode 100644
index 000000000..a8ef6641f
--- /dev/null
+++ b/configfiles/EventBuilderV2/TriggerDataDecoderConfig
@@ -0,0 +1,3 @@
+verbosity 0
+StoreTrigOverlap 0
+ReadTrigOverlap 0
diff --git a/configfiles/EventBuilderV2/my_files.txt b/configfiles/EventBuilderV2/my_files.txt
new file mode 100644
index 000000000..20d80ce49
--- /dev/null
+++ b/configfiles/EventBuilderV2/my_files.txt
@@ -0,0 +1,2 @@
+/pnfs/annie/persistent/raw/raw/4779/RAWDataR4779S0p0
+/pnfs/annie/persistent/raw/raw/4779/RAWDataR4779S0p1