diff --git a/Examples/FactorialAnalysis.R b/Examples/FactorialAnalysis.R new file mode 100644 index 00000000..ff9b84c9 --- /dev/null +++ b/Examples/FactorialAnalysis.R @@ -0,0 +1,58 @@ +library(lme4) +library(xtable) +library(MASS) +########### + +resFace0=read.table('distances_0_0.csv',header=T,sep=',') +resFace2=read.table('distances_2_2.csv',header=T,sep=',') + +# resFace0=resFace0[-c(1:32),] +# resFace2=resFace2[-c(1:32),] + +##Create Indicator for which Fiducial +Cube=rep(rep(c(1:5),each=32),2) +##Create indicator for the Face +fc=rep(c(-1,1),each=160) +############### +factors=c('Solenoidal.Fraction','Virial.Parameter','k', 'Mach.Number','Plasma.Beta') +des0=resFace0[,factors] + +colnames(des0)=c('sf','vp','k','m','pb') +res0=resFace0[,!(names(resFace0)%in%c('Ind',factors,'Fiducial','Designs', 'X'))] +stats=colnames(res0) +#des0=as.numeric(des0) +#res0=as.numeric(res0) + + +des2=resFace2[,factors] +colnames(des2)=c('sf','vp','k','m','pb') +res2=resFace2[,!(names(resFace2)%in%c('Ind',factors,'Fiducial','Designs', 'X'))] +#des2=as.numeric(des2) +#res2=as.numeric(res2) + + +data=cbind(Cube,fc,rbind(des0,des2),rbind(res0,res2)) + +apply(data,2,mean) + +############## +numStat=length(stats) +indStat=1:numStat + +TVals=matrix(0,nrow=63,ncol=numStat) + +for(i in 1:numStat) +{ + print(stats[i]) + mod=paste(stats[i],'~fc*sf*vp*k*m*pb+(1|Cube)',sep='') + ReMod=lmer(mod,REML=F,data=data) + + TVals[,i]=matrix(summary(ReMod)$coeff[-1,3,drop=F]) +} + +TVals=data.frame(TVals) +colnames(TVals)=stats +rownames(TVals)=rownames(summary(ReMod)$coeff[-1,3,drop=F]) + +write.table(TVals,'ResultsFactorial.csv',sep=',') +write.table(data, 'DataforFits.csv', sep=',')