Update make_resistance_genes_bed.py

BCCDC-PHL · Oct 25, 2024 · 5e12b89 · 5e12b89
1 parent 11811ea
commit 5e12b89
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bin/make_resistance_genes_bed.py b/bin/make_resistance_genes_bed.py
@@ -22,7 +22,7 @@ def get_gene_info_from_tbdb(tbdb_bed: Path, tbdb_gff: Path) -> list:
         for line in f:
             line_split = line.strip().split('\t')
             res_gene_name = line_split[4]
-            start_pos = int(line_split[1]) - 1 #tbdb.bed 1 indexed, subtract 1 for 0 based index
+            start_pos = int(line_split[1]) - 1 
             end_pos = int(line_split[2])
             drug_resistance = line_split[5]
             if res_gene_name == 'Rv0678':