Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Allow only certain inputs in columns in upload manifest #17

Open
wshands opened this issue Mar 15, 2017 · 1 comment
Open

Allow only certain inputs in columns in upload manifest #17

wshands opened this issue Mar 15, 2017 · 1 comment
Assignees

Comments

@wshands
Copy link

wshands commented Mar 15, 2017

using 'fastq.qz' in File Type column instead of the correct 'fastq.gz' is accepted by the upload client but causes the Luigi decider to skip processing the files. The upload client should check for erroneous column entries, issue a clear error message and stop the upload or skip the line in the upload manifest when encountering invalid input.

@wshands
Copy link
Author

wshands commented Oct 3, 2017

There are other fields that require restricted input values such as Submitter Experimental Design. I believe this should probably all be addressed in the future Spinnaker component.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants