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Tibanna BIMSB

This is a fork of Tibanna for use with the Rolv platform.

We made changes to awsf3-docker:

  • Remove unused packages from Dockerfile
  • upload debug logs on Snakemake failures
  • tag resources with "AkalinCostOwner" and "project" because for our account the "Name" tag cannot be used in AWS CostExplorer

Build

cd awsf3-docker
docker build --build-arg version=v5.4.3-bimsb .
docker tag $IMAGE bimsbbioinfo/tibanna-bimsb:latest
docker login
docker push bimsbbioinfo/tibanna-bimsb:latest

TODO

  • push to ECR instead of dockerhub
  • change log directory for tibanna logs