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modules.json
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modules.json
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{
"name": "nf-core/bacass",
"homePage": "https://github.com/nf-core/bacass",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"bakta/bakta": {
"branch": "master",
"git_sha": "9d0f89b445e1f5b2fb30476f4be9a8b519c07846",
"installed_by": ["modules"]
},
"bakta/baktadbdownload": {
"branch": "master",
"git_sha": "7c06e6820fa3918bc28a040e794f8a2b39fabadb",
"installed_by": ["modules"]
},
"canu": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"dragonflye": {
"branch": "master",
"git_sha": "a3ae45e99f68e513b0feb8d5f27e2fdd0d0f083d",
"installed_by": ["modules"],
"patch": "modules/nf-core/dragonflye/dragonflye.diff"
},
"fastp": {
"branch": "master",
"git_sha": "95cf5fe0194c7bf5cb0e3027a2eb7e7c89385080",
"installed_by": ["fastq_trim_fastp_fastqc"]
},
"fastqc": {
"branch": "master",
"git_sha": "285a50500f9e02578d90b3ce6382ea3c30216acd",
"installed_by": ["fastq_trim_fastp_fastqc"]
},
"gunzip": {
"branch": "master",
"git_sha": "3a5fef109d113b4997c9822198664ca5f2716208",
"installed_by": ["modules"]
},
"kraken2/kraken2": {
"branch": "master",
"git_sha": "653218e79ffa76fde20319e9062f8b8da5cf7555",
"installed_by": ["modules"]
},
"miniasm": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"minimap2/align": {
"branch": "master",
"git_sha": "2c2d1cf80866dbd6dd0ea5d61ddd59533a72d41e",
"installed_by": ["modules"]
},
"nanoplot": {
"branch": "master",
"git_sha": "a31407dfaf0cb0d04768d5cb439fc6f4523a6981",
"installed_by": ["modules"],
"patch": "modules/nf-core/nanoplot/nanoplot.diff"
},
"porechop/porechop": {
"branch": "master",
"git_sha": "1d68c7f248d1a480c5959548a9234602b771199e",
"installed_by": ["modules"]
},
"prokka": {
"branch": "master",
"git_sha": "49ebda931c36c2b282f7958d00e1236b751f1031",
"installed_by": ["modules"]
},
"quast": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"racon": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"samtools/index": {
"branch": "master",
"git_sha": "f4596fe0bdc096cf53ec4497e83defdb3a94ff62",
"installed_by": ["modules"]
},
"samtools/sort": {
"branch": "master",
"git_sha": "4352dbdb09ec40db71e9b172b97a01dcf5622c26",
"installed_by": ["modules"]
},
"untar": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["modules"]
}
}
},
"subworkflows": {
"nf-core": {
"fastq_trim_fastp_fastqc": {
"branch": "master",
"git_sha": "cfd937a668919d948f6fcbf4218e79de50c2f36f",
"installed_by": ["subworkflows"]
},
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["subworkflows"]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "92de218a329bfc9a9033116eb5f65fd270e72ba3",
"installed_by": ["subworkflows"]
},
"utils_nfvalidation_plugin": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["subworkflows"]
}
}
}
}
}
}