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icuesta authored Oct 9, 2023
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[![CircleCI Build Status](https://circleci.com/gh/circleci/circleci-docs.svg?style=shield)](https://circleci.com/gh/BU-ISCIII/bacterial_wgs_training) [![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0) [![CircleCi Community](https://img.shields.io/badge/community-CircleCI%20Discuss-343434.svg)](https://discuss.circleci.com) [![Nextflow version](https://img.shields.io/badge/nextflow->0.29.0-green.svg)](http://nextflow.io) [![Scif](https://img.shields.io/badge/Filesystem-Scientific-brightgreen.svg)](https://sci-f.github.io)

# Bacterial WGS training
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation. [Here you will find the agenda.](slides/20221023_4ED_curso_SeqGenBac_agenda.pdf)
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation. [Here you will find the agenda.](slides/20221009_5ED_curso_SeqGenBac_agenda.pdf)

The material includes slides with theory concepts and a bunch of practical exercises using nextflow and singularity, focusing on the interpretation of results.

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