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tools_q2d2.yaml
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tools_q2d2.yaml
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---
install_repository_dependencies: false
install_resolver_dependencies: false
install_tool_dependencies: false
tools:
- name: qiime2__alignment__mafft
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__alignment__mafft_add
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__alignment__mask
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__composition__add_pseudocount
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__composition__ancom
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__composition__ancombc
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__composition__tabulate
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__cutadapt__demux_paired
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__cutadapt__demux_single
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__cutadapt__trim_paired
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__cutadapt__trim_single
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__dada2__denoise_ccs
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__dada2__denoise_paired
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__dada2__denoise_pyro
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__dada2__denoise_single
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__deblur__denoise_16S
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__deblur__denoise_other
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__deblur__visualize_stats
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__demux__emp_paired
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__demux__emp_single
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__demux__filter_samples
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__demux__subsample_paired
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__demux__subsample_single
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__demux__summarize
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__adonis
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__alpha
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__alpha_correlation
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__alpha_group_significance
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__alpha_phylogenetic
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__alpha_rarefaction
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__beta
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__beta_correlation
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__beta_group_significance
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__beta_phylogenetic
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__beta_rarefaction
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__bioenv
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__core_metrics
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__core_metrics_phylogenetic
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__filter_distance_matrix
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__mantel
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__pcoa
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__pcoa_biplot
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__procrustes_analysis
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__tsne
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity__umap
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__alpha_passthrough
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__beta_passthrough
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__beta_phylogenetic_meta_passthrough
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__beta_phylogenetic_passthrough
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__bray_curtis
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__faith_pd
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__jaccard
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__observed_features
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__pielou_evenness
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__shannon_entropy
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__unweighted_unifrac
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__diversity_lib__weighted_unifrac
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__emperor__biplot
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__emperor__plot
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__emperor__procrustes_plot
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__blast
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__classify_consensus_blast
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__classify_consensus_vsearch
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__classify_hybrid_vsearch_sklearn
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__classify_sklearn
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__extract_reads
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__find_consensus_annotation
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__fit_classifier_naive_bayes
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__fit_classifier_sklearn
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_classifier__vsearch_global
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__core_features
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__filter_features
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__filter_features_conditionally
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__filter_samples
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__filter_seqs
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__group
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__heatmap
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__merge
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__merge_seqs
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__merge_taxa
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__presence_absence
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__rarefy
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__relative_frequency
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__rename_ids
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__subsample
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__summarize
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__tabulate_seqs
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__feature_table__transpose
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__fragment_insertion__classify_otus_experimental
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__fragment_insertion__filter_features
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__fragment_insertion__sepp
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__gneiss__assign_ids
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__gneiss__correlation_clustering
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__gneiss__dendrogram_heatmap
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__gneiss__gradient_clustering
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__gneiss__ilr_hierarchical
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__gneiss__ilr_phylogenetic
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__gneiss__ilr_phylogenetic_differential
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__gneiss__ilr_phylogenetic_ordination
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__anova
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__feature_volatility
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__first_differences
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__first_distances
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__linear_mixed_effects
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__maturity_index
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__nmit
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__pairwise_differences
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__pairwise_distances
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__plot_feature_volatility
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__longitudinal__volatility
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__metadata__distance_matrix
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__metadata__shuffle_groups
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__metadata__tabulate
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__align_to_tree_mafft_fasttree
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__align_to_tree_mafft_iqtree
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__align_to_tree_mafft_raxml
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__fasttree
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__filter_table
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__filter_tree
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__iqtree
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__iqtree_ultrafast_bootstrap
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__midpoint_root
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__raxml
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__raxml_rapid_bootstrap
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__phylogeny__robinson_foulds
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__quality_control__bowtie2_build
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__quality_control__evaluate_composition
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__quality_control__evaluate_seqs
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__quality_control__evaluate_taxonomy
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__quality_control__exclude_seqs
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__quality_control__filter_reads
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__quality_filter__q_score
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__classify_samples
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__classify_samples_from_dist
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__classify_samples_ncv
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__confusion_matrix
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__fit_classifier
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__fit_regressor
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__heatmap
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__metatable
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__predict_classification
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__predict_regression
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__regress_samples
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__regress_samples_ncv
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__scatterplot
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__split_table
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__sample_classifier__summarize
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__taxa__barplot
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__taxa__collapse
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__taxa__filter_seqs
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__taxa__filter_table
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__vsearch__cluster_features_closed_reference
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__vsearch__cluster_features_de_novo
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__vsearch__cluster_features_open_reference
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__vsearch__dereplicate_sequences
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__vsearch__fastq_stats
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__vsearch__merge_pairs
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__vsearch__uchime_denovo
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2__vsearch__uchime_ref
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2_core__tools__export
owner: q2d2
tool_panel_section_label: QIIME 2
- name: qiime2_core__tools__import
owner: q2d2
tool_panel_section_label: QIIME 2