_pkgdown.yml

template:
  bootstrap: 5

home:
  title: An R package for single trial analysis of field trials

navbar:
  title: "statgenSTA"
  left:
    - icon: fa-home
      href: index.html
    - text: "Vignettes"
      href: articles/index.html
  right:
    - icon: fa-newspaper-o
      text: "news"
      href: news/index.html
    - icon: fa-file-code-o
      text: "functions"
      href: reference/index.html
    - icon: fa-seedling
      text: "other packages"
      menu:
        - text: "statgenGxE"
          href: https://biometris.github.io/statgenGxE
        - text: "statgenGWAS"
          href: https://biometris.github.io/statgenGWAS
        - text: "statgenQTLxT"
          href: https://biometris.github.io/statgenQTLxT
        - text: "statgenHTP"
          href: https://biometris.github.io/statgenHTP
        - text: "statgenIBD"
          href: https://biometris.github.io/statgenIBD
        - text: "statgenMPP"
          href: https://biometris.github.io/statgenMPP
        - text: "LMMsolver"
          href: https://biometris.github.io/LMMsolver
    - icon: fa-github fa-lg fab
      text: "github"
      href: https://github.com/Biometris/statgenSTA


articles:
  - title: "Vignettes"
    desc: >
      This vignette provides a full description of the statgenSTA package
      including a fully worked example.
    contents:
      - statgenSTA

reference:
- title: Data preparation
- contents:
  - createTD
  - addTD
  - dropTD
  - getMeta
  - setMeta
  - summary.TD
  - plot.TD
- title: Single trial analysis
- contents:
  - fitTD
  - extractSTA
  - summary.STA
  - plot.STA
  - report.STA
  - STAtoTD
  - STAtoCross
- title: Outlier detection
- contents:
  - outlierSTA
- title: Example data
- contents:
  - dropsRaw
  - TDMaize
  - TDHeat05
- title: Internal helper functions
- contents:
  - report