Merge pull request #76 from BlueBrain/fix-export-hoc-script

Export all seeds in export_hoc script
BlueBrain · Oct 25, 2023 · 21e5023 · 21e5023
2 parents 817638c + b79ef89
commit 21e5023
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diff --git a/examples/emodel_pipeline_local_python/export_hoc.sbatch b/examples/emodel_pipeline_local_python/export_hoc.sbatch
@@ -36,4 +36,4 @@ sleep 20
 srun ipengine --profile=${IPYTHON_PROFILE} --location=$(hostname) &
 sleep 20
 
-python pipeline.py --use_ipyparallel --step='export_hoc' --emodel=${OPT_EMODEL}
+python pipeline.py --use_ipyparallel --step='export_hoc' --emodel=${OPT_EMODEL} --seed=${OPT_SEED}
diff --git a/examples/emodel_pipeline_local_python/export_hoc.sh b/examples/emodel_pipeline_local_python/export_hoc.sh
@@ -18,4 +18,7 @@ source ./myvenv/bin/activate
 
 export OPT_EMODEL="L5PC"
 
-sbatch -J "export_hoc_${OPT_EMODEL}"  ./export_hoc.sbatch
+for seed in {1..5}; do
+    export OPT_SEED=${seed}
+    sbatch -J "export_hoc_${OPT_EMODEL}_${OPT_SEED}"  ./export_hoc.sbatch
+done