Fix: Better first_point fix #610
Annotations
141 errors
tests/test_algo.py.test_TMDApicalAlgo:
tests/test_algo.py#L228
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.37386951
Max relative difference: 1.83737032
x: array([0.57735, 0.57735, 0.57735])
y: array([0.203481, 0.541099, 0.81597 ])
|
tests/test_algo.py.test_TMDGradientAlgo:
tests/test_algo.py#L284
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.17689627
Max relative difference: 0.4417393
x: array([0.57735, 0.57735, 0.57735])
y: array([0.400454, 0.573604, 0.714573])
|
tests/test_neuron_functional.py.test_default:
tests/test_neuron_functional.py#L527
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f22d02f4610>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f22d02f4610> = diff('/tmp/tmp34p5xkhmtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
tests/test_neuron_functional.py.test_default:
tests/test_neuron_functional.py#L619
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fd1253c5730>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fd1253c5730> = diff('/tmp/tmp2_4zozdftest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
tests/test_neuron_functional.py.test_with_rng:
tests/test_neuron_functional.py#L537
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f22d02a59a0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f22d02a59a0> = diff('/tmp/tmpmgvbtrn8test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
tests/test_neuron_functional.py.test_skip_preprocessing:
tests/test_neuron_functional.py#L548
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f22d0571070>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f22d0571070> = diff('/tmp/tmppw2kdlr3test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
tests/test_morphmath_bifurcation.py.test_get_bif_directional:
tests/test_morphmath_bifurcation.py#L24
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 2 / 6 (33.3%)
Max absolute difference: 1.
Max relative difference: 1.
x: array([[0., 1., 0.],
[0., 1., 0.]])
y: array([[0., 1., 0.],
[0., 0., 1.]])
|
tests/test_morphmath_bifurcation.py.test_get_bif_bio_oriented:
tests/test_morphmath_bifurcation.py#L46
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 2 / 6 (33.3%)
Max absolute difference: 0.70710678
Max relative difference: 1.
x: array([[0., 1., 0.],
[0., 1., 0.]])
y: array([[0. , 1. , 0. ],
[0. , 0.707107, 0.707107]])
|
tests/test_morphmath_bifurcation.py.test_get_bif_symmetric:
tests/test_morphmath_bifurcation.py#L60
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 4 / 6 (66.7%)
Max absolute difference: 0.479426
Max relative difference: 1.
x: array([[0., 0., 1.],
[0., 0., 1.]])
y: array([[ 0. , -0.479426, 0.877583],
[ 0. , 0.479426, 0.877583]])
|
tests/test_neuron_functional.py.test_with_rng:
tests/test_neuron_functional.py#L721
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fb4e7a2cdf0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fb4e7a2cdf0> = diff('/tmp/tmptra733z_test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
tests/test_neuron_functional.py.test_with_rng:
tests/test_neuron_functional.py#L629
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fd124e4ecd0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fd124e4ecd0> = diff('/tmp/tmp4p1w7rcjtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
tests/test_neuron_functional.py.test_skip_rng_and_preprocessing:
tests/test_neuron_functional.py#L559
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f22d00e4280>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f22d00e4280> = diff('/tmp/tmprrquqw9utest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
tests/test_neuron_functional.py.test_default:
tests/test_neuron_functional.py#L573
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f22d0084f10>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f22d0084f10> = diff('/tmp/tmp73aapa6otest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
tests/test_neuron_functional.py.test_skip_preprocessing:
tests/test_neuron_functional.py#L732
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fb4e7af1970>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fb4e7af1970> = diff('/tmp/tmp5gs059rytest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
tests/test_neuron_functional.py.test_skip_preprocessing:
tests/test_neuron_functional.py#L640
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fd124ee5c10>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fd124ee5c10> = diff('/tmp/tmp7qpq3pdrtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
tests/test_neuron_functional.py.test_with_rng:
tests/test_neuron_functional.py#L583
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f22d051d250>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f22d051d250> = diff('/tmp/tmpb4yrbc5ttest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
tests/test_neuron_functional.py.test_skip_rng_and_preprocessing:
tests/test_neuron_functional.py#L743
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fb4e7545f70>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fb4e7545f70> = diff('/tmp/tmplvkafgoptest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
tests/test_neuron_functional.py.test_breaker_of_tmd_algo:
tests/test_neuron_functional.py#L284
AssertionError:
Arrays are not almost equal to 5 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 91.49147879
Max relative difference: 2.17589941
x: array([-118.23524, 133.53914, -8.61812], dtype=float32)
y: array([-170.45485, 42.04766, -26.37539])
|
tests/test_neuron_functional.py.test_skip_rng_and_preprocessing:
tests/test_neuron_functional.py#L651
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fd124efba30>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fd124efba30> = diff('/tmp/tmp7ttgeugatest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
tests/test_neuron_functional.py.test_default:
tests/test_neuron_functional.py#L457
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f12d3779d00>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f12d3779d00> = diff('/tmp/tmp_mn0lb3mtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
tests/test_neuron_functional.py.test_skip_preprocessing:
tests/test_neuron_functional.py#L594
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f22d00479a0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f22d00479a0> = diff('/tmp/tmp5xxr0z1ltest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
tests/test_neuron_functional.py.test_with_rng:
tests/test_neuron_functional.py#L467
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f12d37571c0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f12d37571c0> = diff('/tmp/tmpojx6_kq_test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
tests/test_rotation.py.test_rotate_vector:
tests/test_rotation.py#L30
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.706011
Max relative difference: 2.40148781
x: array([1., 1., 1.])
y: array([0.293989, 1.240039, 1.172976])
|
tests/test_soma_grower.py.test_soma_grower:
tests/test_soma_grower.py#L436
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 30 / 33 (90.9%)
Max absolute difference: 2.5715265
Max relative difference: 0.26042482
x: array([[ -1.44443 , -8.843385, 14.457643],
[ -1.693793, -9.399601, 15.327622],
[ -1.843625, -10.025176, 16.045628],...
y: array([[ -1.44443 , -8.843385, 14.457643],
[ -1.742285, -9.295837, 15.371422],
[ -1.963416, -9.790936, 16.168482],...
|
tests/test_neuron_functional.py.test_default:
tests/test_neuron_functional.py#L665
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fd12536ac70>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fd12536ac70> = diff('/tmp/tmp2ylshzvstest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
tests/test_neuron_functional.py.test_skip_preprocessing:
tests/test_neuron_functional.py#L478
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f12d36f4af0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f12d36f4af0> = diff('/tmp/tmp2er5tafjtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
tests/test_neuron_functional.py.test_skip_rng_and_preprocessing:
tests/test_neuron_functional.py#L605
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f22d02ba4f0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f22d02ba4f0> = diff('/tmp/tmpy_h9lsv6test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
tests/test_neuron_functional.py.test_skip_rng_and_preprocessing:
tests/test_neuron_functional.py#L489
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f12d3422d30>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f12d3422d30> = diff('/tmp/tmpce77mfu3test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
tests/test_neuron_functional.py.test_with_rng:
tests/test_neuron_functional.py#L675
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fd125284640>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fd125284640> = diff('/tmp/tmpxvsqxj62test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
tests/astrocyte/test_space_colonization.py.test_fallback_strategy:
tests/astrocyte/test_space_colonization.py#L112
AssertionError:
Not equal to tolerance rtol=1e-07, atol=0
Mismatched elements: 2 / 3 (66.7%)
Max absolute difference: 1.
Max relative difference: 1.
x: array([0., 1., 0.])
y: array([ 0., 0., -1.])
|
tests/test_neuron_functional.py.test_skip_preprocessing:
tests/test_neuron_functional.py#L686
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fd12536ceb0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fd12536ceb0> = diff('/tmp/tmp5g7bu2_atest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
tests/test_neuron_functional.py.test_skip_rng_and_preprocessing:
tests/test_neuron_functional.py#L697
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fd12529adc0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fd12529adc0> = diff('/tmp/tmpnj_crj8dtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
tests/test_neuron_functional.py.test_default:
tests/test_neuron_functional.py#L711
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fd124efb220>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fd124efb220> = diff('/tmp/tmpp36h4i52test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
test_algo.test_TMDApicalAlgo:
tests/test_algo.py#L79
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.37386951
Max relative difference: 1.83737032
x: array([0.57735, 0.57735, 0.57735])
y: array([0.203481, 0.541099, 0.81597 ])
|
test_algo.test_TMDGradientAlgo:
tests/test_algo.py#L79
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.17689627
Max relative difference: 0.4417393
x: array([0.57735, 0.57735, 0.57735])
y: array([0.400454, 0.573604, 0.714573])
|
test_neuron_functional.test_breaker_of_tmd_algo:
tests/test_neuron_functional.py#L297
AssertionError:
Arrays are not almost equal to 5 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 91.49147879
Max relative difference: 2.17589941
x: array([-118.23524, 133.53914, -8.61812], dtype=float32)
y: array([-170.45485, 42.04766, -26.37539])
|
test_morphmath_bifurcation.test_get_bif_directional:
tests/test_morphmath_bifurcation.py#L26
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 2 / 6 (33.3%)
Max absolute difference: 1.
Max relative difference: 1.
x: array([[0., 1., 0.],
[0., 1., 0.]])
y: array([[0., 1., 0.],
[0., 0., 1.]])
|
test_morphmath_bifurcation.test_get_bif_bio_oriented:
tests/test_morphmath_bifurcation.py#L48
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 2 / 6 (33.3%)
Max absolute difference: 0.70710678
Max relative difference: 1.
x: array([[0., 1., 0.],
[0., 1., 0.]])
y: array([[0. , 1. , 0. ],
[0. , 0.707107, 0.707107]])
|
test_morphmath_bifurcation.test_get_bif_symmetric:
tests/test_morphmath_bifurcation.py#L62
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 4 / 6 (66.7%)
Max absolute difference: 0.479426
Max relative difference: 1.
x: array([[0., 0., 1.],
[0., 0., 1.]])
y: array([[ 0. , -0.479426, 0.877583],
[ 0. , 0.479426, 0.877583]])
|
TestBioRatL5Tpc1.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4a92b76b10>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4a92b76b10> = diff('/tmp/tmpolpash9itest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestPathGrower.test_skip_rng_and_preprocessing:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f55dbd35310>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f55dbd35310> = diff('/tmp/tmpa5q3ezo7test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestPathGrower.test_default:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f70eeeb5390>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f70eeeb5390> = diff('/tmp/tmp880epgfutest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestPathGrower.test_with_rng:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f70eef5c850>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f70eef5c850> = diff('/tmp/tmpincz5kh_test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestGradientPathGrower.test_default:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f55db7bb990>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f55db7bb990> = diff('/tmp/tmpft_vpu2ytest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc2.test_default:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4a92c1ce90>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4a92c1ce90> = diff('/tmp/tmpf3hbeykstest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestPathGrower.test_skip_preprocessing:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f70eccb4210>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f70eccb4210> = diff('/tmp/tmpddd6l8ldtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestGradientPathGrower.test_with_rng:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f55db7ab2d0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f55db7ab2d0> = diff('/tmp/tmprzsp0cn7test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc4.test_default:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f70ecc9f5d0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f70ecc9f5d0> = diff('/tmp/tmpyxmiftintest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestGradientPathGrower.test_skip_preprocessing:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f55db9aa110>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f55db9aa110> = diff('/tmp/tmprzwa_ocbtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc2.test_with_rng:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4a9084bf10>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4a9084bf10> = diff('/tmp/tmplll0498xtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestGradientPathGrower.test_skip_rng_and_preprocessing:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f55d7497dd0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f55d7497dd0> = diff('/tmp/tmplwnxy2gvtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc4.test_with_rng:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f70ec8f5390>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f70ec8f5390> = diff('/tmp/tmpcvaix3ritest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestBioRatL5Tpc1.test_default:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f55db824d90>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f55db824d90> = diff('/tmp/tmpwfj3pd32test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestBioRatL5Tpc2.test_skip_preprocessing:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4a902e4e90>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4a902e4e90> = diff('/tmp/tmpjstpo84htest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestBioRatL5Tpc4.test_skip_preprocessing:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f70eef5c210>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f70eef5c210> = diff('/tmp/tmpnshpyy31test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestBioRatL5Tpc1.test_with_rng:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f55d7496dd0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f55d7496dd0> = diff('/tmp/tmp5s2blio8test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestBioRatL5Tpc2.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4a90a27910>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4a90a27910> = diff('/tmp/tmpljy3s0sotest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
test_rotation.test_rotate_vector:
.tox/py311/lib/python3.11/site-packages/scipy/spatial/transform/tests/test_rotation.py#L32
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.706011
Max relative difference: 2.40148781
x: array([1., 1., 1.])
y: array([0.293989, 1.240039, 1.172976])
|
TestBioRatL5Tpc4.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f70eef44210>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f70eef44210> = diff('/tmp/tmpkdmvymlmtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
test_soma_grower:
tests/test_soma_grower.py#L453
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 30 / 33 (90.9%)
Max absolute difference: 2.5715265
Max relative difference: 0.26042482
x: array([[ -1.44443 , -8.843385, 14.457643],
[ -1.693793, -9.399601, 15.327622],
[ -1.843625, -10.025176, 16.045628],...
y: array([[ -1.44443 , -8.843385, 14.457643],
[ -1.742285, -9.295837, 15.371422],
[ -1.963416, -9.790936, 16.168482],...
|
TestBioRatL5Tpc1.test_skip_preprocessing:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f55db825590>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f55db825590> = diff('/tmp/tmpa8j1x1nqtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestBioRatL5Tpc3.test_default:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4a90a65450>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4a90a65450> = diff('/tmp/tmprar6meqttest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
test_space_colonization.test_fallback_strategy:
tests/astrocyte/test_space_colonization.py#L134
AssertionError:
Not equal to tolerance rtol=1e-07, atol=0
Mismatched elements: 2 / 3 (66.7%)
Max absolute difference: 1.
Max relative difference: 1.
x: array([0., 1., 0.])
y: array([ 0., 0., -1.])
|
TestBioRatL5Tpc3.test_with_rng:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4a90648f90>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4a90648f90> = diff('/tmp/tmpecvfcfd5test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
TestBioRatL5Tpc3.test_skip_preprocessing:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4a90a50690>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4a90a50690> = diff('/tmp/tmp9wrhmcuytest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
TestBioRatL5Tpc3.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4a947fa2d0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4a947fa2d0> = diff('/tmp/tmp5bvcz8gttest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
tests (3.8, min_versions)
Process completed with exit code 1.
|
tests (3.11, latest_versions)
The job was canceled because "_3_8_min_versions" failed.
|
tests (3.11, latest_versions)
Process completed with exit code 1.
|
test_algo.test_TMDApicalAlgo:
tests/test_algo.py#L79
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.37386951
Max relative difference: 1.83737032
x: array([0.57735, 0.57735, 0.57735])
y: array([0.203481, 0.541099, 0.81597 ])
|
test_algo.test_TMDGradientAlgo:
tests/test_algo.py#L79
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.17689627
Max relative difference: 0.4417393
x: array([0.57735, 0.57735, 0.57735])
y: array([0.400454, 0.573604, 0.714573])
|
test_neuron_functional.test_breaker_of_tmd_algo:
tests/test_neuron_functional.py#L297
AssertionError:
Arrays are not almost equal to 5 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 91.49147879
Max relative difference: 2.17589941
x: array([-118.23524, 133.53914, -8.61812], dtype=float32)
y: array([-170.45485, 42.04766, -26.37539])
|
test_morphmath_bifurcation.test_get_bif_directional:
tests/test_morphmath_bifurcation.py#L26
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 2 / 6 (33.3%)
Max absolute difference: 1.
Max relative difference: 1.
x: array([[0., 1., 0.],
[0., 1., 0.]])
y: array([[0., 1., 0.],
[0., 0., 1.]])
|
TestPathGrower.test_skip_rng_and_preprocessing:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf0b4d00>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf0b4d00> = diff('/tmp/tmptfeyu20utest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
test_morphmath_bifurcation.test_get_bif_bio_oriented:
tests/test_morphmath_bifurcation.py#L48
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 2 / 6 (33.3%)
Max absolute difference: 0.70710678
Max relative difference: 1.
x: array([[0., 1., 0.],
[0., 1., 0.]])
y: array([[0. , 1. , 0. ],
[0. , 0.707107, 0.707107]])
|
test_morphmath_bifurcation.test_get_bif_symmetric:
tests/test_morphmath_bifurcation.py#L62
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 4 / 6 (66.7%)
Max absolute difference: 0.479426
Max relative difference: 1.
x: array([[0., 0., 1.],
[0., 0., 1.]])
y: array([[ 0. , -0.479426, 0.877583],
[ 0. , 0.479426, 0.877583]])
|
TestBioRatL5Tpc1.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7ff37412c520>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7ff37412c520> = diff('/tmp/tmpwh2nldx0test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestPathGrower.test_default:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa71f315870>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa71f315870> = diff('/tmp/tmpct6pnbsftest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestGradientPathGrower.test_default:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf03dc60>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf03dc60> = diff('/tmp/tmpbq96tsk4test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestPathGrower.test_with_rng:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa71f3170d0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa71f3170d0> = diff('/tmp/tmpu51t1ipstest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestGradientPathGrower.test_with_rng:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf2fb160>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf2fb160> = diff('/tmp/tmpixdn_9zxtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc2.test_default:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7ff37417b820>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7ff37417b820> = diff('/tmp/tmpie5c8bzctest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestPathGrower.test_skip_preprocessing:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa71d00aa10>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa71d00aa10> = diff('/tmp/tmpodfsu249test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestGradientPathGrower.test_skip_preprocessing:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf168be0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf168be0> = diff('/tmp/tmpkply61n1test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc4.test_default:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa71f38de70>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa71f38de70> = diff('/tmp/tmp3o9_a_sqtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestGradientPathGrower.test_skip_rng_and_preprocessing:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f8cbef70eb0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f8cbef70eb0> = diff('/tmp/tmpqv3vizp6test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc2.test_with_rng:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7ff37412e500>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7ff37412e500> = diff('/tmp/tmp1u6rvi6ltest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestBioRatL5Tpc1.test_default:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf149ba0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf149ba0> = diff('/tmp/tmp1sn0rsfgtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestBioRatL5Tpc4.test_with_rng:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa71d0ef040>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa71d0ef040> = diff('/tmp/tmp_vwp7yjetest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestBioRatL5Tpc2.test_skip_preprocessing:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7ff37623a620>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7ff37623a620> = diff('/tmp/tmp3fd5wzjstest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestBioRatL5Tpc1.test_with_rng:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf133ee0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf133ee0> = diff('/tmp/tmpo0azqi4otest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestBioRatL5Tpc4.test_skip_preprocessing:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa71d0a28c0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa71d0a28c0> = diff('/tmp/tmp66judmvrtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestBioRatL5Tpc2.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7ff37412f0a0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7ff37412f0a0> = diff('/tmp/tmpav95xziytest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestBioRatL5Tpc1.test_skip_preprocessing:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf0d4ac0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f8cbf0d4ac0> = diff('/tmp/tmp8vpad2shtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestBioRatL5Tpc4.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa71d0a34f0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa71d0a34f0> = diff('/tmp/tmp_xt58lietest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
test_soma_grower:
tests/test_soma_grower.py#L453
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 30 / 33 (90.9%)
Max absolute difference: 2.5715265
Max relative difference: 0.26042482
x: array([[ -1.44443 , -8.843385, 14.457643],
[ -1.693793, -9.399601, 15.327622],
[ -1.843625, -10.025176, 16.045628],...
y: array([[ -1.44443 , -8.843385, 14.457643],
[ -1.742285, -9.295837, 15.371422],
[ -1.963416, -9.790936, 16.168482],...
|
TestBioRatL5Tpc3.test_default:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7ff374147460>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7ff374147460> = diff('/tmp/tmp6nmp3z1rtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
test_rotation.test_rotate_vector:
.tox/py310/lib/python3.10/site-packages/scipy/spatial/transform/tests/test_rotation.py#L32
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.706011
Max relative difference: 2.40148781
x: array([1., 1., 1.])
y: array([0.293989, 1.240039, 1.172976])
|
test_space_colonization.test_fallback_strategy:
tests/astrocyte/test_space_colonization.py#L134
AssertionError:
Not equal to tolerance rtol=1e-07, atol=0
Mismatched elements: 2 / 3 (66.7%)
Max absolute difference: 1.
Max relative difference: 1.
x: array([0., 1., 0.])
y: array([ 0., 0., -1.])
|
TestBioRatL5Tpc3.test_with_rng:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7ff3741a64a0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7ff3741a64a0> = diff('/tmp/tmp3e8lnkemtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
TestBioRatL5Tpc3.test_skip_preprocessing:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7ff374145a50>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7ff374145a50> = diff('/tmp/tmpf5y5kmijtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
TestBioRatL5Tpc3.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7ff3741da140>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7ff3741da140> = diff('/tmp/tmpx_b4z1x3test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
tests (3.8, latest_versions)
The job was canceled because "_3_8_min_versions" failed.
|
tests (3.8, latest_versions)
The operation was canceled.
|
tests (3.10, latest_versions)
The job was canceled because "_3_8_min_versions" failed.
|
tests (3.10, latest_versions)
Process completed with exit code 255.
|
test_algo.test_TMDApicalAlgo:
tests/test_algo.py#L79
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.37386951
Max relative difference: 1.83737032
x: array([0.57735, 0.57735, 0.57735])
y: array([0.203481, 0.541099, 0.81597 ])
|
test_algo.test_TMDGradientAlgo:
tests/test_algo.py#L79
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.17689627
Max relative difference: 0.4417393
x: array([0.57735, 0.57735, 0.57735])
y: array([0.400454, 0.573604, 0.714573])
|
test_neuron_functional.test_breaker_of_tmd_algo:
tests/test_neuron_functional.py#L297
AssertionError:
Arrays are not almost equal to 5 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 91.49147879
Max relative difference: 2.17589941
x: array([-118.23524, 133.53914, -8.61812], dtype=float32)
y: array([-170.45485, 42.04766, -26.37539])
|
test_morphmath_bifurcation.test_get_bif_directional:
tests/test_morphmath_bifurcation.py#L26
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 2 / 6 (33.3%)
Max absolute difference: 1.
Max relative difference: 1.
x: array([[0., 1., 0.],
[0., 1., 0.]])
y: array([[0., 1., 0.],
[0., 0., 1.]])
|
test_morphmath_bifurcation.test_get_bif_bio_oriented:
tests/test_morphmath_bifurcation.py#L48
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 2 / 6 (33.3%)
Max absolute difference: 0.70710678
Max relative difference: 1.
x: array([[0., 1., 0.],
[0., 1., 0.]])
y: array([[0. , 1. , 0. ],
[0. , 0.707107, 0.707107]])
|
test_morphmath_bifurcation.test_get_bif_symmetric:
tests/test_morphmath_bifurcation.py#L62
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 4 / 6 (66.7%)
Max absolute difference: 0.479426
Max relative difference: 1.
x: array([[0., 0., 1.],
[0., 0., 1.]])
y: array([[ 0. , -0.479426, 0.877583],
[ 0. , 0.479426, 0.877583]])
|
TestPathGrower.test_skip_preprocessing:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa3bc1b9eb0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa3bc1b9eb0> = diff('/tmp/tmpil23eur7test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestBioRatL5Tpc1.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f46521ee820>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f46521ee820> = diff('/tmp/tmp2qja7pgbtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestPathGrower.test_default:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4df2b40370>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4df2b40370> = diff('/tmp/tmpwi0484d2test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestPathGrower.test_skip_rng_and_preprocessing:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa3de0caeb0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa3de0caeb0> = diff('/tmp/tmp9_aufsrqtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestPathGrower.test_with_rng:
TestPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4df2b2fd00>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4df2b2fd00> = diff('/tmp/tmpu2uj11v0test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'path_grower.h5')
|
TestBioRatL5Tpc2.test_default:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f46546f7280>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f46546f7280> = diff('/tmp/tmpwxsoacd1test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestGradientPathGrower.test_default:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa3bc165df0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa3bc165df0> = diff('/tmp/tmpjmecgnjctest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc4.test_default:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4df4d5ff70>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4df4d5ff70> = diff('/tmp/tmpuewvhq8otest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestGradientPathGrower.test_with_rng:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa3b9dae130>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa3b9dae130> = diff('/tmp/tmpp9gi27_5test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc2.test_with_rng:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f46520a0130>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f46520a0130> = diff('/tmp/tmpfn56sg42test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestGradientPathGrower.test_skip_preprocessing:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa3b9dafa90>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa3b9dafa90> = diff('/tmp/tmp6oetgxkatest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc4.test_with_rng:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4df4c889d0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4df4c889d0> = diff('/tmp/tmp8rtvmpq_test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestGradientPathGrower.test_skip_rng_and_preprocessing:
TestGradientPathGrower#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa3bc165070>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa3bc165070> = diff('/tmp/tmp4ikzx3ultest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/gradient_path_grower.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'gradient_path_grower.h5')
|
TestBioRatL5Tpc4.test_skip_preprocessing:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4df4c88640>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4df4c88640> = diff('/tmp/tmpuths_ggwtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestBioRatL5Tpc1.test_default:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa3b9cd4070>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa3b9cd4070> = diff('/tmp/tmpw_ycryx3test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestBioRatL5Tpc2.test_skip_preprocessing:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f465469f2b0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f465469f2b0> = diff('/tmp/tmpd6fe2tvbtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
TestBioRatL5Tpc1.test_with_rng:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa3bc23de20>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa3bc23de20> = diff('/tmp/tmpyk362j3ptest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestBioRatL5Tpc4.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc4#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4df4e20be0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4df4e20be0> = diff('/tmp/tmpvqmr0eaetest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params4.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params4.h5')
|
TestBioRatL5Tpc2.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc2#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f46522402e0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f46522402e0> = diff('/tmp/tmpi_2awuk9test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params2.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params2.h5')
|
test_rotation.test_rotate_vector:
.tox/docs/lib/python3.9/site-packages/scipy/spatial/transform/tests/test_rotation.py#L32
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 3 / 3 (100%)
Max absolute difference: 0.706011
Max relative difference: 2.40148781
x: array([1., 1., 1.])
y: array([0.293989, 1.240039, 1.172976])
|
test_soma_grower:
tests/test_soma_grower.py#L453
AssertionError:
Arrays are not almost equal to 6 decimals
Mismatched elements: 30 / 33 (90.9%)
Max absolute difference: 2.5715265
Max relative difference: 0.26042482
x: array([[ -1.44443 , -8.843385, 14.457643],
[ -1.693793, -9.399601, 15.327622],
[ -1.843625, -10.025176, 16.045628],...
y: array([[ -1.44443 , -8.843385, 14.457643],
[ -1.742285, -9.295837, 15.371422],
[ -1.963416, -9.790936, 16.168482],...
|
TestBioRatL5Tpc1.test_skip_preprocessing:
TestBioRatL5Tpc1#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7fa3bbf0cbb0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7fa3bbf0cbb0> = diff('/tmp/tmp6e8lms23test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params1.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params1.h5')
|
TestBioRatL5Tpc3.test_default:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f46522403a0>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f46522403a0> = diff('/tmp/tmp7hgwrt65test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
test_space_colonization.test_fallback_strategy:
tests/astrocyte/test_space_colonization.py#L134
AssertionError:
Not equal to tolerance rtol=1e-07, atol=0
Mismatched elements: 2 / 3 (66.7%)
Max absolute difference: 1.
Max relative difference: 1.
x: array([0., 1., 0.])
y: array([ 0., 0., -1.])
|
TestBioRatL5Tpc3.test_with_rng:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4654836220>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4654836220> = diff('/tmp/tmprs_u5b41test_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
TestBioRatL5Tpc3.test_skip_preprocessing:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4654657e20>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4654657e20> = diff('/tmp/tmpoi1cvmthtest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
TestBioRatL5Tpc3.test_skip_rng_and_preprocessing:
TestBioRatL5Tpc3#L1
AssertionError: assert not <morph_tool.morphio_diff.DiffResult object at 0x7f4652551d00>
+ where <morph_tool.morphio_diff.DiffResult object at 0x7f4652551d00> = diff('/tmp/tmpisyjqmtftest_grower/test_output_neuron_.h5', '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5')
+ where '/home/runner/work/NeuroTS/NeuroTS/tests/data/expected_bio_rat_L5_TPC_B_with_params3.h5' = join('/home/runner/work/NeuroTS/NeuroTS/tests/data', 'expected_bio_rat_L5_TPC_B_with_params3.h5')
|
tests (3.9, latest_versions)
The job was canceled because "_3_8_min_versions" failed.
|
tests (3.9, latest_versions)
Process completed with exit code 255.
|
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tests-3.9-latest_versions
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