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Make a connection output additional information following an Action Potential (AP)
Weina Ji edited this page Nov 13, 2024
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1 revision
When debugging Connectivity, it is useful to be able to verify that the postsynaptic cell is triggered when its presynaptic cell has fired.
There is a member variable in Synapses, verboseLevel
, which can be turned on. Normally this is done in the HOC interpreter, but one can also activate it via the connection_overrides
section in the simulation config file as well.
"connection_overrides": [
{
"name": "init",
"source": "hex_O1",
"target": "hex_O1",
"synapse_configure" : "%s.verboseLevel = 1"
},
...
]
In the simulator output, you should find messages following synaptic events
If there is no release
[Syn 2868] Failure! t = 99.9752: urand = 0.528058
If an Inhibitory Synapse (ProbGABAAB_EMS) releases (values are from NET_RECEIVE: A_GABAA, weight_GABAA, factor_GABAA),
or if an Excitatory Synapse (ProbAMPANMDA_EMS) releases (values are from NET_RECEIVE: A_AMPA, weight_AMPA, factor_AMPA, weight)
[Syn 1633] Release! t = 99.9902, vals: 1.05995 0.939071 1.12872 0.939071