Fix R CMD CHECK

DESCRIPTION

@@ -1,18 +1,12 @@
 Package: MAEio
 Title: Read Various Data Sources into MultiAssayExperiment objects 
-Version: 0.0.0.9000
+Version: 0.1.9000
 Authors@R: 
     person("Gregor", "Sturm", , "[email protected]", role = c("aut", "cre"))
-Description: Read Various Data Sources into MultiAssayExperiment objects
+Description: This package provides convenience functions for reading real-world evidence data provided by Personalis into Bioconductor MultiAssayExperiment objects.
 Encoding: UTF-8
 Roxygen: list(markdown = TRUE)
-RoxygenNote: 7.2.3
-Suggests: 
-    knitr,
-    rmarkdown,
-    purrr,
-    conflicted,
-    testthat (>= 3.0.0)
+RoxygenNote: 7.3.0
 Depends:
     SummarizedExperiment,
     readxl,
@@ -24,6 +18,11 @@ Depends:
     dplyr,
     BumpyMatrix,
     rvest
+Suggests: 
+    knitr,
+    rmarkdown,
+    conflicted,
+    testthat (>= 3.0.0)
 Config/testthat/edition: 3
 biocViews:
 VignetteBuilder: knitr

R/util.R

@@ -42,7 +42,7 @@ catch_file_not_found <- function(path, callback, ...) {
 warn_missing_samples <- function(sample_list, sample_paths, mod_name) {
   failed_sample_mask <- vapply(sample_list, is.null, logical(1))
   lapply(sample_paths[failed_sample_mask], function(path) {
-    message(sprintf("⚠️  No gene %s found for %s. Sample ignored.", mod_name, basename(path)))
+    message(sprintf("️\u26A0\uFE0F No gene %s found for %s. Sample ignored.", mod_name, basename(path)))
   })
   if (sum(failed_sample_mask)) {
     warning(sprintf("%i %s sample(s) were not found. Please check the log for details.", sum(failed_sample_mask), mod_name))

tests/testthat/test_TODO.R

@@ -0,0 +1,3 @@
+test_that("this is a placeholder to be filled in case we end up having test data that can be publicly shared", {
+  print("foo")
+})