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Spatial smoothing #1

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RayStick opened this issue Apr 3, 2020 · 0 comments
Open

Spatial smoothing #1

RayStick opened this issue Apr 3, 2020 · 0 comments
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enhancement New feature or request

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@RayStick
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RayStick commented Apr 3, 2020

Add a standard spatial smoothing script. Starting point, of using AFNI function:

Smooth whole dataset
3dBlurToFWHM -FWHM 4 -automask -prefix ALLSmoothed4mm.nii.gz -input Not_Smoothing.nii.gz
Or just smooth within a mask
3dBlurToFWHM -FWHM 4 -mask GMmask.nii.gz –prefix GMSmoothed4mm.nii.gz –input Not_Smoothing.nii.gz

@RayStick RayStick added the enhancement New feature or request label Apr 3, 2020
@RayStick RayStick changed the title Add a smoothing script Spatial smoothing Apr 6, 2020
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@RayStick