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MRIO-edit.owl
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MRIO-edit.owl
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<?xml version="1.0"?>
<rdf:RDF xmlns="http://purl.obolibrary.org/obo/"
xml:base="http://purl.obolibrary.org/obo/"
xmlns:cl="http://purl.obolibrary.org/obo/cl#"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:go="http://purl.obolibrary.org/obo/go#"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:core="http://purl.obolibrary.org/obo/core#"
xmlns:doap="http://usefulinc.com/ns/doap#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:obda="https://w3id.org/obda/vocabulary#"
xmlns:pato="http://purl.obolibrary.org/obo/pato#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:chebi="http://purl.obolibrary.org/obo/chebi/"
xmlns:core1="http://purl.obolibrary.org/obo/uberon/core#"
xmlns:mondo="http://purl.obolibrary.org/obo/mondo#"
xmlns:swrla="http://swrl.stanford.edu/ontologies/3.3/swrla.owl#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:terms="http://purl.org/dc/terms/"
xmlns:chebi1="http://purl.obolibrary.org/obo/chebi#3"
xmlns:chebi2="http://purl.obolibrary.org/obo/chebi#1"
xmlns:ubprop="http://purl.obolibrary.org/obo/ubprop#"
xmlns:protege="http://protege.stanford.edu/plugins/owl/protege#"
xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#"
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/">
<owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/mrio/releases/2021-04-10/mrio.owl"/>
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/mondo.owl"/>
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/ncit.owl"/>
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/pato.owl"/>
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/MRIO/releases/2024-05-29/imports/obi_import.owl"/>
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/bfo/2019-08-26/bfo.owl"/>
<dc:contributor>Alan Ruttenberg</dc:contributor>
<dc:creator>Alexander D. Bartnik</dc:creator>
<dc:creator>Alexander D. Diehl</dc:creator>
<dc:creator>Lauren M. Wishnie</dc:creator>
<dc:creator>Lucas Serra</dc:creator>
<dc:creator>Mackenzie Smith</dc:creator>
<dc:creator>Michael G. Dwyer</dc:creator>
<dc:creator>William D. Duncan</dc:creator>
<dc:creator>Alexander Terry</dc:creator>
<dc:description>An ontology for the representation of MRI acquisition and analysis.</dc:description>
<dc:title>MRI Ontology (MRI)</dc:title>
<terms:license>https://creativecommons.org/licenses/by/4.0/</terms:license>
</owl:Ontology>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.org/dc/elements/1.1/creator -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/creator"/>
<!-- http://purl.org/dc/elements/1.1/date -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/date"/>
<!-- http://purl.org/dc/elements/1.1/description -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/description"/>
<!-- http://purl.org/dc/elements/1.1/source -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/source"/>
<!-- http://purl.org/dc/elements/1.1/title -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/title"/>
<!-- http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled -->
<owl:AnnotationProperty rdf:about="http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled"/>
<!-- http://www.geneontology.org/formats/oboInOwl#source -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#source"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Object Properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/BFO_0000050 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000050"/>
<!-- http://purl.obolibrary.org/obo/BFO_0000051 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000051"/>
<!-- http://purl.obolibrary.org/obo/BFO_0000054 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000054"/>
<!-- http://purl.obolibrary.org/obo/BFO_0000055 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000055"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000136 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000136"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000235 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000235"/>
<!-- http://purl.obolibrary.org/obo/MRIO_0000375 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/MRIO_0000375">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/OBI_0002985"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/OBI_0003332"/>
<IAO_0000115>A relation between an magnetic resonance image acquisition sequence and the pulse sequence(s) that contribute to it.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">has pulse sequence</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/MRIO_0000688 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/MRIO_0000688">
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>A relation between some part of the MRI acquisition sequence and the setttings of an MRI machine set by a technician.</IAO_0000115>
<rdfs:label xml:lang="en">has MRI acquisition parameter</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/OBI_0000293 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000293"/>
<!-- http://purl.obolibrary.org/obo/OBI_0000299 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000299"/>
<!-- http://purl.obolibrary.org/obo/OBI_0000312 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000312"/>
<!-- http://purl.obolibrary.org/obo/OBI_0001938 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0001938"/>
<!-- http://purl.obolibrary.org/obo/RO_0000053 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000053"/>
<!-- http://purl.obolibrary.org/obo/RO_0000059 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000059"/>
<!-- http://purl.obolibrary.org/obo/RO_0000087 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000087"/>
<!-- http://purl.obolibrary.org/obo/RO_0002025 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002025"/>
<!-- http://purl.obolibrary.org/obo/RO_0002180 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002180"/>
<!-- http://purl.obolibrary.org/obo/RO_0002233 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002233"/>
<!-- http://purl.obolibrary.org/obo/RO_0002351 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002351"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Data properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/IAO_0000004 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000004"/>
<!-- http://purl.obolibrary.org/obo/MRIO_0000376 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/MRIO_0000376">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000428"/>
<IAO_0000115>A relation between the recovery time (TR) set by the technician and an MRI acquisition sequence.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">has TR value</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/MRIO_0000377 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/MRIO_0000377">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000428"/>
<IAO_0000115>A relation between the echo time (TE) set by the technician and an MRI acquisition sequence.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">has TE value</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/MRIO_0000384 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/MRIO_0000384">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000428"/>
<IAO_0000115>A relation between the flip angle set by the technician and an MRI acquisition sequence.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">has flip angle value</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/MRIO_0000428 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/MRIO_0000428">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/OBI_0002985"/>
<IAO_0000115>A relation between the MRI machine setting datum set by the technician and the properties of an MRI acquisition sequence.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">has MRI machine setting value</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/MRIO_0000606 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/MRIO_0000606">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000428"/>
<IAO_0000115>A relation between the inversion time (TI) set by the technician and an MRI acquisition sequence.</IAO_0000115>
<rdfs:label xml:lang="en">has TI value</rdfs:label>
</owl:DatatypeProperty>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Classes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/CARO_0000000 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0000000"/>
<!-- http://purl.obolibrary.org/obo/CHEBI_33375 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_33375"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000027 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000027"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000032 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000032"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000100 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000100"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000101 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000101"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000140 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000140"/>
<!-- http://purl.obolibrary.org/obo/MF_0000008 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MF_0000008">
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-30T23:59:27Z</dc:date>
<rdfs:label xml:lang="en">cognitive process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000341 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000341">
<IAO_0000115>An image data set that is the direct output of a raw magnetic resonance image data set reconstruction or a transformation of another magnetic resonance image data set.</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9625-1899 "William D. Duncan"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-7245-3450 "Lauren M. Wishnie"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-9821-4132 "Mackenzie T. Smith"</IAO_0000117>
<IAO_0000118>scan</IAO_0000118>
<IAO_0100001 rdf:resource="http://purl.obolibrary.org/obo/OBI_0003334"/>
<rdfs:label>obsolete reconstructed magnetic resonance image data set</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000342 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000342">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000380"/>
<IAO_0000115>Parameters that a technician may specify to compose a specific MRI acquisition sequence as part of a scanning protocol.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">MRI machine parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000345 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000345">
<IAO_0000115>A T1 weighted image data set where gadolidium contrast agent has been administered to the participant before image acquistion.</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<IAO_0100001 rdf:resource="http://purl.obolibrary.org/obo/OBI_0003342"/>
<rdfs:label>obsolete Post-Gd T1 image data set</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000347 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000347">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003339"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000683"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000385"/>
</owl:Restriction>
</rdfs:subClassOf>
<IAO_0000115>A timeseries of MRI images including pre- and post-contrast at different times</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<rdfs:label xml:lang="en">DCE perfusion data set</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000348 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000348">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003339"/>
<IAO_0000115>A timeseries of MRI images like DCE perfusion, but using no injected contrast (uses flow coded pulses instead)</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<rdfs:label xml:lang="en">ASL perfusion data set</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000349 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000349">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003334"/>
<IAO_0000115>A pair of MRI images pre- and post-application of an MT offset pulse</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<rdfs:label xml:lang="en">magnetization transfer image data set</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000350 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000350">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003335"/>
<IAO_0000115>Diffusion weighted image data set with at least 6 directional vectors.</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<rdfs:label xml:lang="en">diffusion weighted image data set suitable for DTI</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000351 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000351">
<IAO_0000115>An magnetic resonance image data set in which the contrast emphasizes density of protons, supressing T1 and T2 effects</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<IAO_0100001 rdf:resource="http://purl.obolibrary.org/obo/OBI_0003340"/>
<rdfs:label>obsolete proton density image data set</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000352 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000352">
<IAO_0000115>A type of T2-weighted image in which the acquisition is performed using a 2D spin-echo technique</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<IAO_0100001 rdf:resource="http://purl.obolibrary.org/obo/OBI_0003351"/>
<rdfs:label>obsolete T2 SE image data set</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000353 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000353">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003334"/>
<IAO_0000115>A type of processed MRI image calculated as a results</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<rdfs:label xml:lang="en">QSM image data set</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000354 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000354">
<IAO_0000115>A type of functional MRI in which the participant is not given a task, but just rests during acquisision</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<rdfs:label>obsolete Resting state functional magnetic resonance image data set</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000355 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000355">
<IAO_0000115>A type of functional MRI in which the participant is given a task or tasks, which are timed with the acquisition</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<rdfs:label>obsolete Task-based functional magnetic resonance image data set</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000356 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000356">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The direction that the MRI image was taken.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">plane</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000357 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000357">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The repetition time (TR) is the time from the application of an excitation pulse to the application of the next pulse. It determines how much longitudinal magnetization recovers between each pulse. It is measured in milliseconds. (radiopedia)</IAO_0000115>
<IAO_0000118>TR</IAO_0000118>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">repetition time</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000358 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000358">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The tie between an excitation pulse and peak of the echo produced in magnetic resonance imaging.</IAO_0000115>
<IAO_0000118>TE</IAO_0000118>
<IAO_0000119>https://dicom.innolitics.com/ciods/mr-image/mr-image/00180081</IAO_0000119>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">echo time</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000359 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000359">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The number of spin echoes in given unit of time.</IAO_0000115>
<IAO_0000118>ETL</IAO_0000118>
<IAO_0000118>echo number</IAO_0000118>
<IAO_0000118>turbo factor</IAO_0000118>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">echo train length</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000360 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000360">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The distance (in cm or mm) over which an magnetic resonance image is acquired or displayed.</IAO_0000115>
<IAO_0000118>FOV</IAO_0000118>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">field of view</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000361 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000361">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>A parameter that can be selected by a technologist as a percent of our overall field of view. A different field of view (the scanned region) in the frequency and phase encoding directions that means the data acquisition with fewer measurement lines.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:comment>has exact synonym Rectangular field of view</rdfs:comment>
<rdfs:label xml:lang="en">phase FOV</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000362 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000362">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The distance between two 2D image matrices, gives the measurement of a voxel in the z direction.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">slice thickness</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000363 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000363">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The not measured distance between the slices.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">slice gap</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000364 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000364">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The total number of independent data samples in the frequency and phase directions (number of pixels in the frequency encoding - and phase encoding direction).</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">acquisition matrix</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000365 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000365">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The process of locating a magnetic resonance signal by altering the phase of spins in one dimension with a pulsed magnetic field gradient along that dimension prior to the acquisition of the signal.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">phase encoding</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000366 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000366">
<IAO_0000115>An magnetic resonance image acquired using a T1 weighted magnetic resonance image acquisition sequence.</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<IAO_0100001 rdf:resource="http://purl.obolibrary.org/obo/OBI_0003341"/>
<rdfs:label>obsolete T1 weighted image data set</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000367 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000367">
<IAO_0000115>An magnetic resonance image produced by a T2 weighted magnetic resonance image acquisition sequence.</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<IAO_0100001 rdf:resource="http://purl.obolibrary.org/obo/OBI_0003348"/>
<rdfs:label>obsolete T2 weighted image data set</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000368 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000368">
<IAO_0000115>An magnetic resonance image data set collected as a 4D time series representing changes in brain metabolism (i.e. BOLD), typically used as a proxy for brain activity.</IAO_0000115>
<IAO_0000117>https://orcid.org/0000-0001-9625-1899 "William D. Duncan"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9676-7377 "Alexander D. Bartnik"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0001-9990-8331 "Alexander D. Diehl"</IAO_0000117>
<IAO_0000117>https://orcid.org/0000-0002-2104-0568 "Lucas M. Serra"</IAO_0000117>
<IAO_0100001 rdf:resource="http://purl.obolibrary.org/obo/OBI_0003336"/>
<rdfs:label>obsolete functional magnetic resonance image data set</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000369 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000369">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000342"/>
<IAO_0000115>The number of data points collected in one, two or all three directions. Normally used for the 2D in plane sampling.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">matrix size</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000370 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000370">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000356"/>
<IAO_0000115>The plane that divides the body into left and right sections.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">sagittal</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000371 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000371">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000356"/>
<IAO_0000115>The plane that divides the body into ventral and dorsal sections.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">coronal</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000372 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000372">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000356"/>
<IAO_0000115>The plane that divides the body into inferior and superior sections.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">transverse</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000378 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000378">
<rdfs:subClassOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
<IAO_0000115>An image creation device that creates magnetic resonance images</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">MRI machine</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000380 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000380">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000140"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000136"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000566"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000140"/>
<IAO_0000115>The setting datum of an MRI machine</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">MRI machine setting datum</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000381 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000381">
<rdfs:subClassOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
<IAO_0000115>A measurement datum produced by an MRI machine prior to transformation.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">magnetic resonance imaging datum</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000382 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000382">
<rdfs:subClassOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
<IAO_0000115>A planned process that produces magnetic resonance images from magnetic resonance imaging datum.</IAO_0000115>
<dc:creator rdf:resource="http://orcid.org/0000-0002-2104-0568"/>
<rdfs:label xml:lang="en">magnetic resonance imaging data transformation</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/MRIO_0000385 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000385">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000376"/>
<owl:someValuesFrom>
<rdfs:Datatype>
<owl:onDatatype rdf:resource="http://www.w3.org/2001/XMLSchema#float"/>
<owl:withRestrictions rdf:parseType="Collection">
<rdf:Description>
<xsd:minExclusive rdf:datatype="http://www.w3.org/2001/XMLSchema#float">0.0</xsd:minExclusive>
</rdf:Description>
<rdf:Description>
<xsd:maxExclusive rdf:datatype="http://www.w3.org/2001/XMLSchema#float">800.0</xsd:maxExclusive>
</rdf:Description>
</owl:withRestrictions>
</rdfs:Datatype>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000377"/>
<owl:someValuesFrom>
<rdfs:Datatype>
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