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TODO.md

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  • small test case. for what? general purpose?
  • documentation of srm_msnset
  • adding tweaked heatmap.plus
  • add normalization based on PCA eigenvectors
  • .. add covariate removal (related to above)
  • add power analysis to LM
  • resolve conflict between outliers::outlier and randomForest::outlier
  • there is a suspicion that rrollup causes some troubles with data. The troubles are detected with PCA plot. It splits the data into two well-separated groups. In contrast this is not visible with peptide-level data.