README.md

bulkpipeline

The goal of bulkpipeline is to guide all the bulk_RNASeq done by the Lab

• Low level analysis
  • nf-core/Pipeline
• DGE Scripts and applied libraries
  • DGE
    • Limma
    • DESeq2
  • WGCNA
    • …
• Issues

Installation

You can install the development version of bulkpipeline from GitHub with:

# install.packages("devtools")
devtools::install_github("CostaLab/bulk_RNASeq")