setup.py

import os
from setuptools import setup

cwd = os.path.abspath(os.path.dirname(__file__))

# To update the package version number, edit pssmgen/__version__.py
version = {}
with open(os.path.join(cwd, 'pssmgen', '__version__.py')) as f:
    exec(f.read(), version)

with open('README.md') as readme_file:
    readme = readme_file.read()

setup(
    name='PSSMGen',
    version=version['__version__'],
    description='Generates consistent PSSM and/or PDB files for protein-protein complexes',
    long_description=readme + '\n\n',
    long_description_content_type='text/markdown',
    author='Nicolas Renaud, Cunliang Geng',
    author_email='n.renaud@esciencecenter.nl, c.geng@esciencecenter.nl',
    url='https://github.com/DeepRank/PSSMGen',
    packages=['pssmgen'],
    license="Apache Software License 2.0",
    keywords='pssmgen',

    install_requires=[
        'numpy >= 1.13',
        'scipy',
        'biopython',
        'pdb2sql >= 0.5'],

    extras_require= {
        'test': ['nose', 'coverage', 'pytest',
                 'pytest-cov','codacy-coverage','coveralls'],
    }
)