Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

predict uses depreciated array recycling #17

Open
nlubock opened this issue Mar 31, 2021 · 2 comments
Open

predict uses depreciated array recycling #17

nlubock opened this issue Mar 31, 2021 · 2 comments

Comments

@nlubock
Copy link

nlubock commented Mar 31, 2021

> library(drc)
> spinach.model1 <- drm(SLOPE~DOSE, CURVE, data = spinach, fct = LL.4())
> predict(spinach.model1, data.frame(dose=2, CURVE=c("1", "2", "3")), 
+         interval = "confidence")
     Prediction     Lower     Upper
[1,]  0.9048476 0.8552178 0.9544775
[2,]  0.4208307 0.3626741 0.4789873
[3,]  0.5581673 0.4971838 0.6191509
Warning messages:
1: In (tquan * sqrt(varVal + sumObjRV)) * c(-1, 1) :
  Recycling array of length 1 in array-vector arithmetic is deprecated.
  Use c() or as.vector() instead.

2: In (tquan * sqrt(varVal + sumObjRV)) * c(-1, 1) :
  Recycling array of length 1 in array-vector arithmetic is deprecated.
  Use c() or as.vector() instead.

3: In (tquan * sqrt(varVal + sumObjRV)) * c(-1, 1) :
  Recycling array of length 1 in array-vector arithmetic is deprecated.
  Use c() or as.vector() instead.

Relevant SessionInfo:

R version 3.6.3 (2020-02-29)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Debian GNU/Linux 10 (buster)

Matrix products: default
BLAS/LAPACK: /usr/lib/x86_64-linux-gnu/libopenblasp-r0.3.5.so

locale:
 [1] LC_CTYPE=C.UTF-8       LC_NUMERIC=C           LC_TIME=C.UTF-8       
 [4] LC_COLLATE=C.UTF-8     LC_MONETARY=C.UTF-8    LC_MESSAGES=C         
 [7] LC_PAPER=C.UTF-8       LC_NAME=C              LC_ADDRESS=C          
[10] LC_TELEPHONE=C         LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C   

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] drc_3.0-1     MASS_7.3-51.5

loaded via a namespace (and not attached):
 [1] zip_2.1.1         Rcpp_1.0.4        cellranger_1.1.0 
 [4] pillar_1.4.7      compiler_3.6.3    forcats_0.5.0    
 [7] tools_3.6.3       lifecycle_0.2.0   tibble_3.0.4     
[10] lattice_0.20-38   pkgconfig_2.0.3   rlang_0.4.9      
[13] openxlsx_4.2.3    Matrix_1.2-18     rstudioapi_0.13  
[16] curl_4.3          mvtnorm_1.1-1     haven_2.2.0      
[19] rio_0.5.16        vctrs_0.3.5       gtools_3.8.2     
[22] hms_0.5.3         grid_3.6.3        data.table_1.12.8
[25] R6_2.5.0          plotrix_3.7-8     readxl_1.3.1     
[28] survival_3.1-8    foreign_0.8-75    multcomp_1.4-15  
[31] TH.data_1.0-10    carData_3.0-4     car_3.0-10       
[34] magrittr_2.0.1    scales_1.1.0      codetools_0.2-16 
[37] ellipsis_0.3.1    splines_3.6.3     rsconnect_0.8.16 
[40] abind_1.4-5       colorspace_1.4-1  sandwich_3.0-0   
[43] stringi_1.5.3     munsell_0.5.0     crayon_1.3.4     
[46] zoo_1.8-8   
@ryandward
Copy link

How's this coming along?

@KonstantinLang
Copy link

@daniel-gerhard, @christian-ritz, can you please take care of this issue.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

3 participants