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EMSL-Computing · Nov 5, 2024 · c62789a · c62789a
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diff --git a/docs/corems.html b/docs/corems.html
diff --git a/docs/corems/chroma_peak/calc/ChromaPeakCalc.html b/docs/corems/chroma_peak/calc/ChromaPeakCalc.html
diff --git a/docs/corems/chroma_peak/factory/chroma_peak_classes.html b/docs/corems/chroma_peak/factory/chroma_peak_classes.html
diff --git a/docs/corems/encapsulation/constant.html b/docs/corems/encapsulation/constant.html
diff --git a/docs/corems/encapsulation/factory/parameters.html b/docs/corems/encapsulation/factory/parameters.html
diff --git a/docs/corems/encapsulation/factory/processingSetting.html b/docs/corems/encapsulation/factory/processingSetting.html
diff --git a/docs/corems/encapsulation/input/parameter_from_json.html b/docs/corems/encapsulation/input/parameter_from_json.html
diff --git a/docs/corems/encapsulation/output/parameter_to_dict.html b/docs/corems/encapsulation/output/parameter_to_dict.html
diff --git a/docs/corems/encapsulation/output/parameter_to_json.html b/docs/corems/encapsulation/output/parameter_to_json.html
diff --git a/docs/corems/mass_spectra/calc/GC_Calc.html b/docs/corems/mass_spectra/calc/GC_Calc.html
diff --git a/docs/corems/mass_spectra/calc/GC_Deconvolution.html b/docs/corems/mass_spectra/calc/GC_Deconvolution.html
diff --git a/docs/corems/mass_spectra/calc/GC_RI_Calibration.html b/docs/corems/mass_spectra/calc/GC_RI_Calibration.html
diff --git a/docs/corems/mass_spectra/calc/LC_Calc.html b/docs/corems/mass_spectra/calc/LC_Calc.html
diff --git a/docs/corems/mass_spectra/calc/MZSearch.html b/docs/corems/mass_spectra/calc/MZSearch.html
diff --git a/docs/corems/mass_spectra/calc/SignalProcessing.html b/docs/corems/mass_spectra/calc/SignalProcessing.html
diff --git a/docs/corems/mass_spectra/factory/GC_Class.html b/docs/corems/mass_spectra/factory/GC_Class.html
diff --git a/docs/corems/mass_spectra/factory/LC_Class.html b/docs/corems/mass_spectra/factory/LC_Class.html
diff --git a/docs/corems/mass_spectra/factory/chromat_data.html b/docs/corems/mass_spectra/factory/chromat_data.html
diff --git a/docs/corems/mass_spectra/input/andiNetCDF.html b/docs/corems/mass_spectra/input/andiNetCDF.html
diff --git a/docs/corems/mass_spectra/input/boosterHDF5.html b/docs/corems/mass_spectra/input/boosterHDF5.html
@@ -317,7 +317,7 @@ <h1 class="modulename">
 </span><span id="L-210"><a href="#L-210"><span class="linenos">210</span></a><span class="sd">        Get the LCMS object.</span>
 </span><span id="L-211"><a href="#L-211"><span class="linenos">211</span></a>
 </span><span id="L-212"><a href="#L-212"><span class="linenos">212</span></a><span class="sd">        &quot;&quot;&quot;</span>
-</span><span id="L-213"><a href="#L-213"><span class="linenos">213</span></a>        <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">lcms</span><span class="p">)</span><span class="o">&gt;</span><span class="mi">0</span><span class="p">:</span>
+</span><span id="L-213"><a href="#L-213"><span class="linenos">213</span></a>        <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">lcms</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
 </span><span id="L-214"><a href="#L-214"><span class="linenos">214</span></a>            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">lcms</span>
 </span><span id="L-215"><a href="#L-215"><span class="linenos">215</span></a>        <span class="k">else</span><span class="p">:</span>
 </span><span id="L-216"><a href="#L-216"><span class="linenos">216</span></a>            <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">&quot;Returning an empty LCMS class&quot;</span><span class="p">)</span>
@@ -532,7 +532,7 @@ <h1 class="modulename">
 </span><span id="ReadHDF_BoosterMassSpectra-211"><a href="#ReadHDF_BoosterMassSpectra-211"><span class="linenos">211</span></a><span class="sd">        Get the LCMS object.</span>
 </span><span id="ReadHDF_BoosterMassSpectra-212"><a href="#ReadHDF_BoosterMassSpectra-212"><span class="linenos">212</span></a>
 </span><span id="ReadHDF_BoosterMassSpectra-213"><a href="#ReadHDF_BoosterMassSpectra-213"><span class="linenos">213</span></a><span class="sd">        &quot;&quot;&quot;</span>
-</span><span id="ReadHDF_BoosterMassSpectra-214"><a href="#ReadHDF_BoosterMassSpectra-214"><span class="linenos">214</span></a>        <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">lcms</span><span class="p">)</span><span class="o">&gt;</span><span class="mi">0</span><span class="p">:</span>
+</span><span id="ReadHDF_BoosterMassSpectra-214"><a href="#ReadHDF_BoosterMassSpectra-214"><span class="linenos">214</span></a>        <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">lcms</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
 </span><span id="ReadHDF_BoosterMassSpectra-215"><a href="#ReadHDF_BoosterMassSpectra-215"><span class="linenos">215</span></a>            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">lcms</span>
 </span><span id="ReadHDF_BoosterMassSpectra-216"><a href="#ReadHDF_BoosterMassSpectra-216"><span class="linenos">216</span></a>        <span class="k">else</span><span class="p">:</span>
 </span><span id="ReadHDF_BoosterMassSpectra-217"><a href="#ReadHDF_BoosterMassSpectra-217"><span class="linenos">217</span></a>            <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">&quot;Returning an empty LCMS class&quot;</span><span class="p">)</span>
@@ -1000,7 +1000,7 @@ <h6 id="parameters">Parameters</h6>
 </span><span id="ReadHDF_BoosterMassSpectra.get_lcms_obj-211"><a href="#ReadHDF_BoosterMassSpectra.get_lcms_obj-211"><span class="linenos">211</span></a><span class="sd">        Get the LCMS object.</span>
 </span><span id="ReadHDF_BoosterMassSpectra.get_lcms_obj-212"><a href="#ReadHDF_BoosterMassSpectra.get_lcms_obj-212"><span class="linenos">212</span></a>
 </span><span id="ReadHDF_BoosterMassSpectra.get_lcms_obj-213"><a href="#ReadHDF_BoosterMassSpectra.get_lcms_obj-213"><span class="linenos">213</span></a><span class="sd">        &quot;&quot;&quot;</span>
-</span><span id="ReadHDF_BoosterMassSpectra.get_lcms_obj-214"><a href="#ReadHDF_BoosterMassSpectra.get_lcms_obj-214"><span class="linenos">214</span></a>        <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">lcms</span><span class="p">)</span><span class="o">&gt;</span><span class="mi">0</span><span class="p">:</span>
+</span><span id="ReadHDF_BoosterMassSpectra.get_lcms_obj-214"><a href="#ReadHDF_BoosterMassSpectra.get_lcms_obj-214"><span class="linenos">214</span></a>        <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">lcms</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
 </span><span id="ReadHDF_BoosterMassSpectra.get_lcms_obj-215"><a href="#ReadHDF_BoosterMassSpectra.get_lcms_obj-215"><span class="linenos">215</span></a>            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">lcms</span>
 </span><span id="ReadHDF_BoosterMassSpectra.get_lcms_obj-216"><a href="#ReadHDF_BoosterMassSpectra.get_lcms_obj-216"><span class="linenos">216</span></a>        <span class="k">else</span><span class="p">:</span>
 </span><span id="ReadHDF_BoosterMassSpectra.get_lcms_obj-217"><a href="#ReadHDF_BoosterMassSpectra.get_lcms_obj-217"><span class="linenos">217</span></a>            <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">&quot;Returning an empty LCMS class&quot;</span><span class="p">)</span>