From c2c655e0f31f36a6bf2f95dbc243b232f4695cd2 Mon Sep 17 00:00:00 2001 From: Bilal Date: Wed, 16 Oct 2024 14:45:21 +0100 Subject: [PATCH 1/5] updgrade metadata api and grpcio --- requirements.txt | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/requirements.txt b/requirements.txt index 24125b8..95e2dcc 100644 --- a/requirements.txt +++ b/requirements.txt @@ -5,6 +5,7 @@ aiodataloader==0.2.1 ariadne==0.23 python-dotenv==0.19.2 uvicorn==0.18.1 -ensembl-metadata-api@git+https://github.com/Ensembl/ensembl-metadata-api.git@2.2.0a1 -grpcio==1.62.0 -grpcio-tools==1.62.0 +ensembl-metadata-api@git+https://github.com/Ensembl/ensembl-metadata-api.git@3.2.1a1 +grpcio==1.66.1 +grpcio-tools==1.66.1 +ensembl-utils==0.4.4 From ea8787e848438ebe556312a351cfc4f215dbb987 Mon Sep 17 00:00:00 2001 From: Bilal Date: Wed, 16 Oct 2024 16:02:48 +0100 Subject: [PATCH 2/5] upgrade requests --- requirements.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/requirements.txt b/requirements.txt index 95e2dcc..fa82e98 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,6 +1,6 @@ mongomock==4.0.0 pymongo==4.6.3 -requests==2.31.0 +requests==2.32.0 aiodataloader==0.2.1 ariadne==0.23 python-dotenv==0.19.2 From 8a6933bfab9127044a35fbd3ad3d54cc8e46358f Mon Sep 17 00:00:00 2001 From: Bilal Date: Wed, 16 Oct 2024 16:21:41 +0100 Subject: [PATCH 3/5] upgrade aiodataloader and python-dotenv --- requirements.txt | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/requirements.txt b/requirements.txt index fa82e98..b295481 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,9 +1,9 @@ mongomock==4.0.0 pymongo==4.6.3 requests==2.32.0 -aiodataloader==0.2.1 +aiodataloader==0.4.0 ariadne==0.23 -python-dotenv==0.19.2 +python-dotenv==1.0.1 uvicorn==0.18.1 ensembl-metadata-api@git+https://github.com/Ensembl/ensembl-metadata-api.git@3.2.1a1 grpcio==1.66.1 From 197d8941993d742b515abf642f73e75a886609a7 Mon Sep 17 00:00:00 2001 From: Bilal Date: Wed, 16 Oct 2024 16:41:08 +0100 Subject: [PATCH 4/5] upgrade pytest --- requirements-dev.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/requirements-dev.txt b/requirements-dev.txt index 0f0e5d5..86708b1 100644 --- a/requirements-dev.txt +++ b/requirements-dev.txt @@ -1,5 +1,5 @@ -r requirements.txt -pytest==8.0.2 +pytest==8.2.0 pytest-asyncio==0.18.3 snapshottest==0.6.0 pylint==2.14.3 From 5279d7958922740f8b71362038cbfb0fae12564c Mon Sep 17 00:00:00 2001 From: Bilal Date: Thu, 17 Oct 2024 15:39:18 +0100 Subject: [PATCH 5/5] add ensembl-py dependency --- requirements.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/requirements.txt b/requirements.txt index b295481..f0152fa 100644 --- a/requirements.txt +++ b/requirements.txt @@ -9,3 +9,4 @@ ensembl-metadata-api@git+https://github.com/Ensembl/ensembl-metadata-api.git@3.2 grpcio==1.66.1 grpcio-tools==1.66.1 ensembl-utils==0.4.4 +ensembl-py==2.1.3