set_up_test_env.sh

#!/usr/bin/env bash

# These environment variables are required by Data Services. See the README for more information.

# DATA_SERVICES_STORAGE - a directory for storing data sources
mkdir -p "$PWD"/../Data_services_storage
export DATA_SERVICES_STORAGE=$PWD/../Data_services_storage/

# DATA_SERVICES_GRAPHS - a directory for storing knowledge graphs
mkdir -p "$PWD"/../Data_services_graphs
export DATA_SERVICES_GRAPHS=$PWD/../Data_services_graphs/

# DATA_SERVICES_LOGS - a directory for storing logs
mkdir -p "$PWD"/../Data_services_logs
export DATA_SERVICES_LOGS=$PWD/../Data_services_logs/

# Use EITHER of the following, DATA_SERVICES_GRAPH_SPEC or DATA_SERVICES_GRAPH_SPEC_URL

# DATA_SERVICES_GRAPH_SPEC - the name of a Graph Spec file located in the graph_specs directory of Data_services
export DATA_SERVICES_GRAPH_SPEC=testing-graph-spec.yml

# DATA_SERVICES_GRAPH_SPEC_URL - a URL pointing to a Graph Spec file
#export DATA_SERVICES_GRAPH_SPEC_URL=https://raw.githubusercontent.com/RENCI-AUTOMAT/Data_services/helm_deploy/graph_specs/yeast-graph-spec.yml

export DATA_SERVICES_NEO4J_PASSWORD=insecurepasswordexample

# export EDGE_NORMALIZATION_ENDPOINT=https://biolink-lookup.transltr.io/
# export NODE_NORMALIZATION_ENDPOINT=https://nodenormalization-sri.renci.org/