-
Notifications
You must be signed in to change notification settings - Fork 0
/
README.Rmd
61 lines (35 loc) · 2.48 KB
/
README.Rmd
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
---
title: "Metadata scheme for Mirocosm Experiments"
output: github_document
---
<!-- README.md is generated from README.Rmd. Please edit that file -->
[](https://doi.org/10.5281/zenodo.1544945)
[](https://opensource.org/licenses/MIT)
<!-- [](https://travis-ci.com/Exp-Micro-Ecol-Hub/emeScheme) -->
<!-- [](https://codecov.io/github/Exp-Micro-Ecol-Hub/emeScheme?branch=master) -->
[](https://www.tidyverse.org/lifecycle/#stable)
----
Please see [Experimental Microbial Ecology Metadata Scheme](https://exp-micro-ecol-hub.github.io/emeScheme/) for details.
# Other Links:
* The [Experimental Microbial Ecology Hub](http://emeh.info)
* The [Experimental Microbial Ecology Protocols](http://emeh-protocols.readthedocs.org/en/latest/)
Github site [https://github.com/Exp-Micro-Ecol-Hub/emeScheme](https://github.com/Exp-Micro-Ecol-Hub/emeScheme)
# User Manual of the emeScheme
See the vignette "User Manual" at <a href="user_manual.html" target="_blank">vignette 'User manual'</a>.
# The R Package
The R package `emeScheme` contains additional functionality for entering, editing, validating and exporting.
## Installation
The package is not on CRAN. Therefore it needs to be installed from github.
```{r echo=TRUE, eval = FALSE}
## install the devtools package if not installed yet
# install.packages("devtools")
## install the last version of emeScheme from github incl vignettes
devtools::install_github("Exp-Micro-Ecol-Hub/emeScheme", ref = "master", build_opts = NULL)
```
## Introduction
- <a href="user_manual.html" target="_blank">'User manual for experimental microbial ecology metadata tool'</a> for a walk-through of using te emeScheme
# Other Resources
## Documentation of the base package `dmdScheme`
The documentation of the base package `dmdScheme` can be found at [Experimental Microbial Ecology Metadata Scheme](https://exp-micro-ecol-hub.github.io/dmdScheme/)
## Outdated Presentations
* [The emeScheme - an Introduction](https://rkrug.github.io/emeScheme_Introduction/The_emeScheme.html) by Rainer M Krug. [](https://doi.org/10.5281/zenodo.2247069)