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Dataset_1.csv
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Dataset_1.csv
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Translation initiation and protein production rates (PPRs) for the TASEP-init and TASEP-elong models.
"Successful initiation rate" was estimated as the number of successful initiation events divided by the total simulation time, whereas "initiation rate" gives the rate of initiation attempts.
Gene TASEP-init initiation rate TASEP-init successful initiation rate TASEP-init PPR TASEP-elong initiation rate TASEP-elong successful initiation rate TASEP-elong PPR
YLR268W 3.922417e-05 3.826432e-05 3.823953e-05 2.343707e-05 2.325090e-05 2.324588e-05
YOR011W 2.012935e-05 1.938229e-05 1.935522e-05 1.403905e-05 1.368410e-05 1.364593e-05
YAL008W 4.438443e-05 4.261330e-05 4.260478e-05 4.447027e-05 4.171327e-05 4.171327e-05
YOR043W 1.093388e-05 1.101566e-05 1.101028e-05 8.495343e-06 8.198532e-06 8.190533e-06
YBR255W 1.630858e-05 1.630689e-05 1.629554e-05 1.132018e-05 1.132717e-05 1.130354e-05
YIL034C 3.709682e-05 3.630783e-05 3.629733e-05 2.503593e-05 2.458118e-05 2.458118e-05
YJR122W 4.584029e-06 4.519756e-06 4.517502e-06 1.045100e-05 1.037594e-05 1.037594e-05
YNL103W 1.607251e-05 1.637356e-05 1.636252e-05 1.746749e-05 1.601379e-05 1.599222e-05
YPL144W 2.633970e-05 2.548372e-05 2.547990e-05 1.093388e-05 1.038597e-05 1.038441e-05
YBR135W 9.081996e-05 8.719277e-05 8.716626e-05 2.183552e-05 2.086223e-05 2.085906e-05
YBR160W 3.448391e-05 3.376961e-05 3.377974e-05 1.795037e-05 1.783237e-05 1.784307e-05
YJL082W 6.586203e-05 6.453734e-05 6.453734e-05 4.496388e-05 4.208460e-05 4.205375e-05
YHR007C 1.743257e-04 1.621903e-04 1.620178e-04 7.042523e-05 6.680874e-05 6.663134e-05
YHR067W 1.777868e-05 1.764890e-05 1.764392e-05 1.337510e-05 1.331607e-05 1.331607e-05
YLR395C 1.170799e-04 1.118840e-04 1.118751e-04 7.714897e-05 6.861143e-05 6.860594e-05
YLR348C 3.112120e-05 3.050557e-05 3.049642e-05 1.795037e-05 1.786120e-05 1.786120e-05
YKL074C 1.386736e-05 1.377701e-05 1.376972e-05 1.313902e-05 1.325408e-05 1.325408e-05
YNL152W 6.928671e-06 6.975071e-06 6.972205e-06 1.241470e-05 1.229920e-05 1.229415e-05
YFL045C 1.730219e-04 1.619605e-04 1.620020e-04 5.850794e-05 5.748407e-05 5.746935e-05
YFL010C 1.044082e-04 9.594035e-05 9.591992e-05 2.012935e-05 1.955396e-05 1.954147e-05
YIL124W 3.671052e-05 3.557012e-05 3.557012e-05 2.073027e-05 2.005559e-05 2.004959e-05
YGL141W 2.599632e-05 2.575082e-05 2.570387e-05 1.746749e-05 1.754355e-05 1.751160e-05
YOR123C 4.085321e-05 4.105460e-05 4.101635e-05 2.529347e-05 2.421942e-05 2.418558e-05
YJL179W 7.406157e-05 6.986642e-05 6.985866e-05 3.709682e-05 3.516087e-05 3.515697e-05
YKL183W 1.777868e-05 1.799022e-05 1.798468e-05 1.313902e-05 1.309868e-05 1.309062e-05
YLR362W 2.130972e-05 2.061927e-05 2.057486e-05 1.598666e-05 1.552395e-05 1.551279e-05
YPL024W 1.442536e-05 1.424264e-05 1.423918e-05 1.110557e-05 1.067666e-05 1.067407e-05
YKL029C 8.425935e-05 7.542358e-05 7.552482e-05 3.129289e-05 2.959423e-05 2.961411e-05
YLR220W 3.187235e-05 3.169316e-05 3.167262e-05 2.256521e-05 2.216297e-05 2.215579e-05
YBR273C 4.601012e-05 4.512831e-05 4.510855e-05 3.259667e-05 3.057382e-05 3.056043e-05
YHR025W 6.467294e-05 6.506887e-05 6.504552e-05 3.671052e-05 3.499114e-05 3.497858e-05
YAL026C 1.122591e-04 1.018973e-04 1.023137e-04 6.287766e-05 5.668610e-05 5.660929e-05
YOL034W 2.762604e-05 2.727083e-05 2.724099e-05 1.313902e-05 1.387852e-05 1.389372e-05
YBL008W 9.149911e-06 9.133412e-06 9.125724e-06 2.300784e-05 2.224438e-05 2.226312e-05
YGL237C 1.006470e-05 1.006430e-05 1.006161e-05 5.624900e-06 5.433541e-06 5.432090e-06
YPR094W 3.540675e-05 3.376811e-05 3.376443e-05 3.610960e-05 3.383717e-05 3.383717e-05
YDR016C 3.129289e-05 3.091541e-05 3.091245e-05 2.047273e-05 1.999848e-05 1.999848e-05
YOL129W 3.319758e-05 3.271346e-05 3.270738e-05 2.130972e-05 2.067014e-05 2.066245e-05
YDR299W 4.856669e-05 4.718834e-05 4.716305e-05 2.527201e-05 2.483903e-05 2.479912e-05
YOL116W 1.403905e-05 1.419442e-05 1.419442e-05 9.463782e-06 9.610416e-06 9.606727e-06
YBR182C 3.940192e-06 4.016617e-06 4.014793e-06 4.197727e-06 4.104019e-06 4.102156e-06
YBR280C 1.852177e-05 1.751258e-05 1.750139e-05 1.045100e-05 9.943609e-06 9.937256e-06
YNR032W 1.339656e-05 1.338117e-05 1.337622e-05 1.059050e-05 1.042765e-05 1.042380e-05
YNR045W 1.132018e-05 1.102234e-05 1.101693e-05 7.851505e-06 7.556441e-06 7.549022e-06
YML105C 4.342001e-05 4.131840e-05 4.129568e-05 2.382337e-05 2.324063e-05 2.324063e-05
YNL288W 2.148141e-05 2.151056e-05 2.150250e-05 1.572913e-05 1.559902e-05 1.559902e-05
YPL104W 3.317612e-05 3.386774e-05 3.384540e-05 2.382337e-05 2.233071e-05 2.230127e-05
YNL003C 1.942314e-05 1.851951e-05 1.852481e-05 1.207132e-05 1.169332e-05 1.168997e-05
YFR047C 3.992166e-05 3.879316e-05 3.879316e-05 2.892981e-05 2.783130e-05 2.782304e-05
YML127W 3.775139e-05 3.681580e-05 3.683727e-05 2.529347e-05 2.513519e-05 2.512054e-05
YLR188W 2.788357e-05 2.628735e-05 2.628735e-05 1.966257e-05 1.888726e-05 1.892677e-05
YGR084C 3.775139e-05 3.625206e-05 3.623970e-05 2.561539e-05 2.577954e-05 2.577075e-05
YCR002C 4.873838e-05 4.641265e-05 4.638258e-05 3.129289e-05 2.931334e-05 2.929436e-05
YLR355C 4.064721e-04 3.712945e-04 3.705581e-04 1.856482e-04 1.514725e-04 1.512320e-04
YGL157W 4.543066e-05 4.509067e-05 4.507494e-05 2.745435e-05 2.807150e-05 2.804213e-05
YGR099W 1.468289e-05 1.436679e-05 1.434698e-05 8.495343e-06 8.440950e-06 8.417665e-06
YJR093C 2.169603e-05 2.175803e-05 2.174371e-05 1.690950e-05 1.673194e-05 1.672094e-05
YLR300W 9.872227e-05 8.094076e-05 8.097718e-05 4.438443e-05 4.073890e-05 4.070227e-05
YJR140C 3.992166e-05 3.988951e-05 3.962751e-05 1.795037e-05 1.656419e-05 1.637379e-05
YOR033C 2.186772e-05 2.140317e-05 2.138811e-05 1.045100e-05 1.062174e-05 1.062922e-05
YBR043C 6.204354e-06 6.210933e-06 6.206644e-06 4.584029e-06 4.503103e-06 4.499993e-06
YLR011W 2.300784e-05 2.234404e-05 2.233973e-05 1.093388e-05 1.095109e-05 1.094897e-05
YIL044C 2.916555e-05 2.865237e-05 2.865237e-05 1.279564e-05 1.300288e-05 1.299508e-05
YDL004W 1.197954e-04 1.105866e-04 1.105687e-04 6.264158e-05 5.925969e-05 5.926929e-05
YCR046C 7.054863e-05 6.553638e-05 6.551397e-05 3.247326e-05 3.114694e-05 3.114694e-05
YLR059C 2.582463e-05 2.511548e-05 2.511548e-05 2.561539e-05 2.457501e-05 2.456835e-05
YDR507C 7.832934e-05 7.090984e-05 7.066700e-05 4.873838e-05 4.534835e-05 4.524470e-05
YOR266W 2.073027e-05 1.990246e-05 1.988556e-05 1.355617e-05 1.257148e-05 1.256080e-05
YDR421W 9.485243e-06 9.046447e-06 9.029248e-06 3.940192e-06 3.900607e-06 3.896893e-06
YGL171W 4.472781e-05 4.298014e-05 4.298014e-05 2.657578e-05 2.585386e-05 2.586850e-05
YGL215W 3.905248e-05 3.812144e-05 3.810414e-05 2.552954e-05 2.535937e-05 2.534786e-05
YGR019W 4.272302e-05 4.180966e-05 4.180966e-05 2.148141e-05 2.209320e-05 2.208275e-05
YNL080C 1.262395e-05 1.232375e-05 1.231922e-05 7.851505e-06 7.835775e-06 7.835775e-06
YOR382W 5.523108e-05 5.438012e-05 5.437169e-05 4.342001e-05 4.272918e-05 4.272255e-05
YDR022C 1.886515e-05 1.896638e-05 1.896263e-05 1.425367e-05 1.408264e-05 1.408542e-05
YPL266W 5.629878e-05 5.399009e-05 5.399009e-05 2.469255e-05 2.373511e-05 2.372752e-05
YBR296C 3.112120e-05 3.068537e-05 3.066770e-05 1.729580e-05 1.700908e-05 1.699928e-05
YER169W 2.038689e-05 1.958832e-05 1.958832e-05 1.279564e-05 1.214875e-05 1.215844e-05
YOL016C 2.070881e-05 2.043562e-05 2.042645e-05 1.149187e-05 1.123979e-05 1.123979e-05
YOR226C 3.688221e-05 3.540109e-05 3.540109e-05 3.922417e-05 3.690518e-05 3.690518e-05
YNL277W 4.085321e-05 3.901313e-05 3.895603e-05 2.235059e-05 2.227773e-05 2.228861e-05
YNL186W 1.860762e-05 1.794223e-05 1.791375e-05 1.860762e-05 1.812973e-05 1.812973e-05
YCL044C 2.820549e-05 2.800998e-05 2.798652e-05 2.148141e-05 2.004324e-05 2.003484e-05
YMR146C 6.885856e-05 6.705624e-05 6.703285e-05 4.342001e-05 4.260657e-05 4.257685e-05
YPR165W 8.066191e-05 7.537203e-05 7.537203e-05 4.307663e-05 4.135778e-05 4.137524e-05
YMR266W 1.047945e-04 8.938231e-05 8.895709e-05 3.384008e-05 3.256729e-05 3.253622e-05
YKR064W 9.485243e-06 9.083043e-06 9.075193e-06 7.508125e-06 7.412855e-06 7.412855e-06
YCR060W 3.553015e-05 3.516803e-05 3.516405e-05 2.343707e-05 2.268326e-05 2.268326e-05
YPL089C 1.572913e-05 1.551367e-05 1.550316e-05 1.630858e-05 1.508977e-05 1.507954e-05
YDL139C 1.183525e-05 1.170697e-05 1.170434e-05 1.403905e-05 1.402891e-05 1.402575e-05
YDR246W 4.374059e-05 4.201256e-05 4.200328e-05 1.973433e-05 1.954749e-05 1.954749e-05
YOR288C 4.236623e-05 3.805207e-05 3.803990e-05 1.656612e-05 1.582315e-05 1.582315e-05
YCR028C 2.762604e-05 2.710169e-05 2.711562e-05 2.012935e-05 2.023176e-05 2.023176e-05
YHR089C 9.498411e-05 8.892683e-05 8.894524e-05 3.953536e-05 3.921680e-05 3.921680e-05
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