Skip to content

FrankErrickson/BlackBoxOptim.jl

 
 

Repository files navigation

BlackBoxOptim.jl

Build Status Coverage Status BlackBoxOptim BlackBoxOptim

BlackBoxOptim is a global optimization package for Julia (http://julialang.org/). It supports both multi- and single-objective optimization problems and is focused on (meta-)heuristic/stochastic algorithms (DE, NES etc) that do NOT require the function being optimized to be differentiable. This is in contrast to more traditional, deterministic algorithms that are often based on gradients/differentiability. It also supports parallel evaluation to speed up optimization for functions that are slow to evaluate.

Installation

using Pkg; Pkg.add("BlackBoxOptim")

or latest master directly from github:

using Pkg; Pkg.clone("https://github.com/robertfeldt/BlackBoxOptim.jl")

from a Julia repl.

Usage

To show how the BlackBoxOptim package can be used, let's implement the Rosenbrock function, a classic problem in numerical optimization. We'll assume that you have already installed BlackBoxOptim as described above.

First, we'll load BlackBoxOptim and define the Rosenbrock function (in 2 dimensions):

using BlackBoxOptim

function rosenbrock2d(x)
  return (1.0 - x[1])^2 + 100.0 * (x[2] - x[1]^2)^2
end

We can now call the bboptimize() function, specifying the function to be optimized (here: rosenbrock2d()) and the range of values allowed for each of the dimensions of the input:

res = bboptimize(rosenbrock2d; SearchRange = (-5.0, 5.0), NumDimensions = 2)

We get back an optimization result object that we can query to, for example, get the best fitness and solution candidate:

best_fitness(res) < 0.001        # Fitness is typically very close to zero here...
length(best_candidate(res)) == 2 # We get back a Float64 vector of dimension 2

BlackBoxOptim will default to using an adaptive differential evolution optimizer in this case and use it to try to locate a solution where both elements can be Floats in the range -5.0:5.0. If you wanted a different range of allowed values for the second dimension of the solution you can specify that with a range of allowed values. In this case you do not need to specify the number of dimensions since that is implicit from the number of ranges supplied:

bboptimize(rosenbrock2d; SearchRange = [(-5.0, 5.0), (-2.0, 2.0)])

If you want to use a different optimizer that can be specified with the Method keyword. For example, using the standard differential evolution optimizer DE/rand/1/bin:

bboptimize(rosenbrock2d; SearchRange = (-5.0, 5.0), NumDimensions = 2, Method = :de_rand_1_bin)

Note that the rosenbrock2d() function is quite easy to optimize. Even a random search will come close if we give it more time:

bboptimize(rosenbrock2d; SearchRange = (-5.0, 5.0), NumDimensions = 2, Method = :random_search, MaxTime = 10.0)

But if we optimize the same rosenbrock function in, say, 30 dimensions that will be very hard for a random searcher while sNES or DE can find good solutions if we give them some time. We can compare optimizers using the compare_optimizers() function:

function rosenbrock(x)
  return( sum( 100*( x[2:end] - x[1:end-1].^2 ).^2 + ( x[1:end-1] - 1 ).^2 ) )
end

res = compare_optimizers(rosenbrock; SearchRange = (-5.0, 5.0), NumDimensions = 30, MaxTime = 3.0);

You can find more examples of using BlackBoxOptim in the examples directory.

Multi-objective optimization

Multi-objective evaluation is supported by the BorgMOEA algorithm. Your fitness function should return a tuple of the objective values and you should indicate the fitness scheme to be (typically) Pareto fitness and specify the number of objectives. Otherwise the use is similar, here we optimize the Schaffer1 function:

fitness_schaffer1(x) = (sum(abs2, x), sum(abs2, x .- 2.0))
res = bboptimize(fitness_schaffer1; Method=:borg_moea,
            FitnessScheme=ParetoFitnessScheme{2}(is_minimizing=true),
            SearchRange=(-10.0, 10.0), NumDimensions=3, ϵ=0.05,
            MaxSteps=50000, TraceInterval=1.0, TraceMode=:verbose);

pareto_frontier(res) would give a vector of all Pareto-optimal solutions and corresponding fitness values. If we simply want to get one individual with the best aggregated fitness:

bs = best_candidate(res)
bf = best_fitness(res)

By default, the aggregated fitness is the sum of the individual objective values, but this could be changed when declaring the fitness scheme, e.g. the weighted sum with weights (0.3, 0.7):

weightedfitness(f) = f[1]*0.3 + f[2]*0.7

...
    FitnessScheme=ParetoFitnessScheme{2}(is_minimizing=true, aggregator=weightedfitness)
...

Of course, once the Pareto set (pareto_frontier(res)) is found, one can apply different criteria to filter the solutions. For example, to find the solution with the minimal first objective:

pf = pareto_frontier(res)
best_obj1, idx_obj1 = findmin(map(elm -> fitness(elm)[1], pf))
bo1_solution = params(pf[idx_obj1]) # get the solution candidate itself...

or to use different weighted sums:

weighedfitness(f, w) = f[1]*w + f[2]*(1.0-w)
weight = 0.4 # Weight on first objective, so second objective will have weight 1-0.4=0.6
best_wfitness, idx = findmin(map(elm -> weighedfitness(fitness(elm), weight), pf))
bsw = params(pf[idx])

Configurable Options

The section above described the basic API for the BlackBoxOptim package. There is a large number of different optimization algorithms that you can select with the Method keyword (adaptive_de_rand_1_bin, adaptive_de_rand_1_bin_radiuslimited, separable_nes, xnes, de_rand_1_bin, de_rand_2_bin, de_rand_1_bin_radiuslimited, de_rand_2_bin_radiuslimited, random_search, generating_set_search, probabilistic_descent, borg_moea).

In addition to the Method parameter, there are many other parameters you can change. Some key ones are:

  • MaxTime: For how long can the optimization run? Defaults to false which means that number of iterations is the given budget, rather than time.
  • MaxFuncEvals: How many evaluations that are allowed of the function being optimized.
  • TraceMode: How optimization progress should be displayed (:silent, :compact, :verbose). Defaults to :compact that outputs current number of fitness evaluations and best value each TraceInterval seconds.
  • PopulationSize: How large is the initial population for population-based optimizers? Defaults to 50.
  • TargetFitness. Allows to specify the value of the best fitness for a given problem. The algorithm stops as soon as the distance between the current best_fitness() and TargetFitness is less than FitnessTolerance. This list is not complete though, please refer to the examples and tests directories for additional examples.

State of the Library

Existing Optimizers

  • Natural Evolution Strategies:
    • Separable NES: separable_nes
    • Exponential NES: xnes
    • Distance-weighted Exponential NES: dxnes
  • Differential Evolution optimizers, 5 different:
    • Adaptive DE/rand/1/bin: de_rand_1_bin
    • Adaptive DE/rand/1/bin with radius limited sampling: adaptive_de_rand_1_bin_radiuslimited
    • DE/rand/1/bin: de_rand_1_bin
    • DE/rand/1/bin with radius limited sampling (a type of trivial geography): de_rand_1_bin_radiuslimited
    • DE/rand/2/bin: de_rand_2_bin
    • DE/rand/2/bin with radius limited sampling (a type of trivial geography): de_rand_2_bin_radiuslimited
  • Direct search:
    • Generating set search:
      • Compass/coordinate search: generating_set_search
      • Direct search through probabilistic descent: probabilistic_descent
  • Resampling Memetic Searchers:
    • Resampling Memetic Search (RS): resampling_memetic_search
    • Resampling Inheritance Memetic Search (RIS): resampling_inheritance_memetic_search
  • Stochastic Approximation:
    • Simultaneous Perturbation Stochastic Approximation (SPSA): simultaneous_perturbation_stochastic_approximation
  • RandomSearch (to compare to): random_search

For multi-objective optimization only the BorgMOEA (borg_moea) is supported but it is a good one. :)

Parallel Function Evaluation

For some (slow) functions being optimized and if you have a multi-core CPU you can gain performance by using parallel evaluation. This typically requires an optimization algorithm that evaluates many candidate points in one batch. The NES family (xnes, dxnes etc) is one such example. See the file

examples/rosenbrock_parallel.jl

for one example of this.

Guide to selecting an optimizer

In our experiments the radius limited DE's perform better than the classic de_rand_1_bin DE in almost all cases. And combining it with adaptive setting of the weights makes it even better. So for now adaptive_de_rand_1_bin_radiuslimited() is our recommended "goto" optimizer. However, the difference between the top performing DE's is slight.

The separable NES often beats all of the DE optimizers in the tests we have done. But it is about 2-3 times slower per iteration so not really a fair comparison. It seems it can still hold up even if we normalize for time rather than number of executions but since it is not as good for non-separable problems it is not our default for now. XNES can sometimes beat sNES but scales very badly so is not a good default choice.

We maintain a list of optimizers ranked by performance when tested on a large set of problems. From the list we can see that adaptive_de_rand_1_bin_radiuslimited is on top when it comes to mean rank among the tested optimizers. The generating_set_search often gives best results (its MedianLogTimesWorseFitness is 0.6, which means its median fitness value is 10^0.6=3.98 times worse than the best found) and is faster (ranked first on run time often) but it is not as robust as the DE optimizers and thus is ranked lower on mean rank (per problem).

About

Black-box optimization for Julia

Resources

License

Stars

Watchers

Forks

Packages

No packages published

Languages

  • Julia 93.7%
  • R 5.0%
  • Other 1.3%