removed hard linking of HDF5 #47
Workflow file for this run
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name: hdf5-iotest | |
# Controls when the action will run. | |
#Triggers the workflow on push or pull requests. | |
on: | |
push: | |
branches: [ master ] | |
pull_request: | |
branches: [ master ] | |
# A workflow run is made up of one or more jobs that | |
# can run sequentially or in parallel | |
jobs: | |
# This workflow contains a single job called "build" | |
build: | |
strategy: | |
matrix: | |
name: ["Ubuntu Latest GCC", "Ubuntu Latest GCC -- develop"] | |
include: | |
- name: "Ubuntu Latest GCC" | |
artifact: "Linux.tar.xz" | |
os: ubuntu-latest | |
hdf5: "release" | |
- name: "Ubuntu Latest GCC -- develop" | |
artifact: "Linux.tar.xz" | |
os: ubuntu-latest | |
hdf5: "develop" | |
name: ${{ matrix.name }} | |
# The type of runner that the job will run on. | |
runs-on: ${{ matrix.os }} | |
if: "!contains(github.event.head_commit.message, 'skip-ci')" | |
# Steps represent a sequence of tasks that will be executed | |
# as part of the job. | |
steps: | |
- name: Check out repository code | |
uses: actions/[email protected] | |
- name: Update repository code | |
run: | | |
sudo apt-get update | |
sudo apt-get install uuid-dev | |
- name: Install Dependencies (Linux--HDF5-release) | |
if: matrix.hdf5 == 'release' | |
run: | | |
sudo apt-get install -qq mpich | |
sudo apt-get install -qq libhdf5-mpich-dev | |
# Set env vars | |
echo "CC=mpicc" >> $GITHUB_ENV | |
echo "CPPFLAGS=-I/usr/include/hdf5/mpich" >> $GITHUB_ENV | |
echo "LDFLAGS=-L/usr/lib/x86_64-linux-gnu/hdf5/mpich" >> $GITHUB_ENV | |
- name: Install Dependencies (Linux--HDF5-develop) | |
if: matrix.hdf5 == 'develop' | |
run: | | |
# Use the newest stable gcc compiler | |
sudo apt-get install automake autoconf libtool libtool-bin | |
sudo apt-get install -qq mpich | |
echo "CC=mpicc" >> $GITHUB_ENV | |
################################## | |
# INSTALL HDF5 FROM SOURCE | |
################################## | |
git clone https://github.com/HDFGroup/hdf5.git | |
export HOME_DIR=$(echo ~) | |
cd hdf5 | |
./autogen.sh | |
./configure --enable-build-mode=debug --without-szlib --disable-fortran --disable-hl \ | |
--disable-tests --disable-tools \ | |
--prefix=$HOME_DIR/hdf5 \ | |
--enable-parallel | |
make -j 8 install | |
mydir="$PWD" | |
echo "HDF5_DIR=$HOME_DIR/hdf5" >> $GITHUB_ENV | |
echo "CPPFLAGS=-I$HDF5_DIR/include" >> $GITHUB_ENV | |
echo "LDFLAGS=-L$HDF5_DIR/lib" >> $GITHUB_ENV | |
################################## | |
# CONFIGURE (Autotools) | |
################################## | |
- name: configure hdf5-iotest | |
run: | | |
./autogen.sh | |
mkdir build; cd build | |
echo "void main(void){}" > junk.c | |
ls $HDF5_DIR/bin/h5pcc | |
$HDF5_DIR/bin/h5pcc junk.c | |
CC=$HDF5_DIR/bin/h5pcc ../configure --prefix=$GITHUB_WORKSPACE/build | |
shell: bash | |
################################## | |
# BUILD HDF5-iotest | |
################################## | |
- name: test hdf5-iotest | |
run: | | |
cd build | |
make | |
make install | |
shell: bash |