diff --git a/workflow/rules/contamination.smk b/workflow/rules/contamination.smk index 217965a..bca9900 100644 --- a/workflow/rules/contamination.smk +++ b/workflow/rules/contamination.smk @@ -1,9 +1,9 @@ rule download_human_ref: output: - get_human_ref(), + hfile=get_human_ref(), params: download=config["human-ref"], - folder=get_resource_path(), + folder=lambda wildcards, output: Path(output.hfile).parent, #get_resource_path(), log: "logs/human_ref_download.log", conda: