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DESCRIPTION
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DESCRIPTION
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Type: Package
Package: tidyestimate
Title: A Tidy Implementation of 'ESTIMATE'
Version: 1.1.1.9000
Authors@R:
c(person(given = "Kai",
family = "Aragaki",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-9458-0426")),
person(given = "Paul",
family = "Roebuck",
role = c("cph"),
email = "[email protected]",
comment = "Copyright holder of ESTIMATE package"),
person(given = "Kosuke",
family = "Yoshihara",
role = c("aut"),
email = "[email protected]",
comment = "Author of original ESTIMATE algorithm"),
person(given = "Rahulsimham",
family = "Vegesna",
role = c("aut"),
comment = "Author of original ESTIMATE algorithm"),
person(given = "Hoon",
family = "Kim",
role = c("aut"),
email = "[email protected]",
comment = "Author of original ESTIMATE algorithm"),
person(given = "Roel",
family = "Verhaak",
role = c("aut"),
comment = "Author of original ESTIMATE algorithm"))
Description: The 'ESTIMATE' package infers tumor purity from expression data as a
function of immune and stromal infiltrate, but requires writing of intermediate
files, is un-pipeable, and performs poorly when presented with modern datasets
with current gene symbols. 'tidyestimate' a fast, tidy, modern reimagination of
'ESTIMATE' (2013) <doi:10.1038/ncomms3612>.
License: GPL (>= 2)
URL: https://github.com/KaiAragaki/tidyestimate
BugReports: https://github.com/KaiAragaki/tidyestimate/issues
Depends:
R (>= 4.1.0)
Imports:
glue,
dplyr,
stats,
rlang,
ggrepel,
ggplot2
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Suggests:
rmarkdown,
knitr
VignetteBuilder: knitr