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low volatile gpu-util in data loading #13

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XLIU-hub opened this issue Nov 15, 2020 · 0 comments
Open

low volatile gpu-util in data loading #13

XLIU-hub opened this issue Nov 15, 2020 · 0 comments

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@XLIU-hub
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Congratulation on your work. We would like to adopt this method to a multi-outputs network to detect diseases in liver. We face a problem when loading dataset, maybe you had the same problem and could you share your experience.

I understand that openslide and DataLoader are used to load tiles. With multiple workers and data stored in local disk, the GPU usage is very high, while the volatile GPU-Util stays at 0 most of the time, jumps to 100 for a few seconds. This results in the training stage to be quite long. Any suggestion to solve this bottleneck? Thanks in advance.

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