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OrQSH1_out.txt
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OrQSH1_out.txt
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BLASTN 2.2.28+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: zizania_palustris_13Nov2018_okGsv.fasta
2,183 sequences; 1,288,768,912 total letters
Query= EU006059.1 Oryza rufipogon voucher IRGC 106430 putative
transcription factor qSH-1 (qSH-1) gene, complete cds
Length=4359
Score E
Sequences producing significant alignments: (Bits) Value
Scaffold_1063;HRSCAF=3427 1301 0.0
Scaffold_13;HRSCAF=912 1219 0.0
Scaffold_70;HRSCAF=1591 311 1e-81
> Scaffold_1063;HRSCAF=3427
Length=42614780
Score = 1301 bits (704), Expect = 0.0
Identities = 1259/1510 (83%), Gaps = 105/1510 (7%)
Strand=Plus/Minus
Query 226 AAGCCAGGCCCGGGCGCTCGGAAAGTGCGGAGCCGTTTCCCCTCTATCTCCACTCTCTCC 285
||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 7307515 AAGCCAGGCCC-GGCGCTCGGAAAGTGCGGAGCCGTTTCCCCTCTATCTCAACACTCTCC 7307457
Query 286 A-GGGC-CAGGTGCTCACTGCGCTGCGCCTCTTCGCACGCACC-ACCCGTACTACGTGCC 342
| |||| |||||||||| ||||| || | | |||||| ||||| ||||||
Sbjct 7307456 AGGGGCACAGGTGCTCA-----CTGCG--TC-T-G--CGCACCGACCCG---TACGTG-- 7307413
Query 343 CACCCGCGCGCGCGCCGAGGA--G-AA-GAGACCCACGACCGTACGTGCGTGCGC----- 393
|| |||||||||||||||||| | || || ||||||||||||||||||| ||||
Sbjct 7307412 CAACCGCGCGCGCGCCGAGGAGGGCAACGA-ACCCACGACCGTACGTGCGCGCGCGAGAG 7307354
Query 394 ---GCCATGTCGTCCGCCGCTGGGGGCGGCGGGTACGGCGGCGG-CCAGGGTGGAGGCGC 449
|||||||||||||||| ||||| | |||||||||| ||| ||| |||| || ||
Sbjct 7307353 AGAGCCATGTCGTCCGCCGTCGGGGGTGATGGGTACGGCGTCGGTCCA-GGTGACGGGGC 7307295
Query 450 GGAGTaccaccaccaccaccacGGGCACGCCGGTCACCTCCTGCTCCACCACCATCCGCA 509
|||| | ||| |||| ||||||||| ||||| ||||||||||| ||||||||||| ||
Sbjct 7307294 GGAGCAGCACGGCCACGTCCACGGGCATGCCGGCCACCTCCTGCTTCACCACCATCCACA 7307235
Query 510 GCACGTggccggcgcggccgttgcggcagcggccgcggcggcgggcgggcAGATGTACCA 569
|||| | ||| | || | | |||||||||||| ||||||||||||||
Sbjct 7307234 GCAC-T---------TGCC--T---GC--C-GTCGCGGCGGCGGGTGGGCAGATGTACCA 7307193
Query 570 CGTGCCCCAGCACAGCCGGCGCGAGAAGCTCCGGTTCCCGCCGGACGCCGGGGACTCGCC 629
|||||| ||||||||||| ||||||||||| ||||||||||| ||| ||| |||||||
Sbjct 7307192 CGTGCCGCAGCACAGCCGACGCGAGAAGCTGCGGTTCCCGCCTGACCCCGCGGACTCG-- 7307135
Query 630 ACCGCCTCATGGTCATGGTCATGGTCATGCCCCgcagcagcagcagcagcaCGGGTCGTG 689
||| | || | | ||||||||||| |||||||||||||||||| |||| |||
Sbjct 7307134 -CCG-C-CA----C-T--TCATGGTCATGTCCCGCAGCAGCAGCAGCA--TGGGGT-GTG 7307088
Query 690 GCCTCCGCCCCCGGCGTTCTACTCGTACGCGTCCTCGTCGTCGTCGTACTCCCCGCACAG 749
||||||||| ||| |||||||||||||||||||||| |||||||| ||||| || |||||
Sbjct 7307087 GCCTCCGCCGCCGTCGTTCTACTCGTACGCGTCCTCTTCGTCGTCATACTCTCCTCACAG 7307028
Query 750 CCCTACTCTAGCGCAGGCGCAGCTGGTGGCGCACGGGCTGGCGCCGCCGCTCCCGCAGAT 809
||| || || || ||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 7307027 CCCCACCCTGGCCCAGGCGCAGCTGGTGGCGCACGGTCTGGCTCCGCCGCTCCCGCAGAT 7306968
Query 810 CCCGACGCAGAACTTCTCGCTGTCGCTCTCCTCCGCGTCGTCGAATCCTCCACCACCGCA 869
|||||||||||||||||| ||||| |||||||| ||||||||||| ||| | | | ||||
Sbjct 7306967 CCCGACGCAGAACTTCTCTCTGTCCCTCTCCTCGGCGTCGTCGAACCCT-C-CTA-CGCA 7306911
Query 870 GGCGCAGCCGAGGAGGCAGCTCGGCGGCCTCGCGCAGGCCACGGGGCCGTTCGGTCCCTT 929
||| |||||||| || |||||| |||||||||||||| ||||| || |||||
Sbjct 7306910 ---GCA---GAGGAGGCCGCCTAGCGGCCCAGCGCAGGCCACGGGTCCGTTTGGGCCCTT 7306857
Query 930 CACCGGCTACGCCGCCGTGCTCGGCCGGTCCCGTTTCCTCGGCCCGGCAGAGAAGCTGTT 989
||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 7306856 CACTGGCTACGCTGCCGTGCTCGGGCGGTCCCGTTTCCTCGGCCCGGCGGAGAAGCTGTT 7306797
Query 990 CGAGGAGATCTGCGACGTCGGCGGCGCTGCTTCGCACGTCGACCGCACCATCTCCGACGA 1049
|||| ||||||||||||||||||||||||| |||||||| ||| |||||||| ||| ||
Sbjct 7306796 CGAGCAGATCTGCGACGTCGGCGGCGCTGCCGCGCACGTCCACCACACCATCTGCGAGGA 7306737
Query 1050 GGGCCTGCTCGACGCGGATCCGATGGACGGCGTCGATCATGACGTCGTTGATCACGACCT 1109
| ||||||||||||||||||||||||| | | || | |||| ||| |||||||||||
Sbjct 7306736 CGCCCTGCTCGACGCGGATCCGATGGAC-G-G-CG--C-TGACCCCGTCGATCACGACCT 7306683
Query 1110 CGGCGGCGCTGACCGCGCAGCGGCCGACGCTGGCCCCATCTCGGGGGCCGAGCAGCAGTG 1169
|||| |||| |||||||| || | ||| ||||||||||||| || ||||||||||||||
Sbjct 7306682 CGGCAGCGCCGACCGCGCCGCAGAGGACCCTGGCCCCATCTCCGGCGCCGAGCAGCAGTG 7306623
Query 1170 GAAGAAGACGAAGCTCATCTCCATGATGGAAGAGGTGA--G-TGAGCTCCGCTAGCCGCC 1226
||||||||| | |||||||||||||||||||||||||| | |||||| ||| | ||||
Sbjct 7306622 GAAGAAGACTAGGCTCATCTCCATGATGGAAGAGGTGAGTGATGAGCT-CGCAACGCGCC 7306564
Query 1227 TCAATTCCTCCTTCCAGGTTTCTTGTGGCGACCATCTTTTTCACCTTGTTTCGGCG-TTA 1285
||||||||||||||||||||||||||| | ||||| ||||| |||||||||| || |||
Sbjct 7306563 TCAATTCCTCCTTCCAGGTTTCTTGTGCCATCCATCCTTTTCTCCTTGTTTCGACGTTTA 7306504
Query 1286 CAATTATCGCTACTCCTGGGTGGAGAAGAATCTTGCACATAGTGGTCATGTCACCGATGC 1345
||||||||||| ||| ||| |||||||||||||||||||||||||| |||||| ||||
Sbjct 7306503 CAATTATCGCTCGTCCGTGGTAGAGAAGAATCTTGCACATAGTGGTCACGTCACCTATGC 7306444
Query 1346 AGTTGCGGATTGCTTTTATTTACTGTGGTTGCATGTGCTTTTGATTTGATGATGATTTCC 1405
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7306443 AGTTGCGGCTTGCTTTTATTTACTGTGGTTGCATGTGCTTTTGATTTGATGATGATTTCC 7306384
Query 1406 TTTGCTGCTGATACATCTTTTGATTTGT-T-CTCTCTCTTCTTTTT-CCTCGAGTGGTTT 1462
|||||| | |||||||||||| || ||| | ||||||||||||||| ||| | ||| |||
Sbjct 7306383 TTTGCTCCAGATACATCTTTTAATGTGTATTCTCTCTCTTCTTTTTTCCT-GTGTGTTTT 7306325
Query 1463 GAGCTTGTACAGTTCTGCACTGTTCATGATGAATAGTGGTGTTCCTCCGCGTCTTATCAC 1522
|| || |||| |||||||||||||||| |||||||| ||||||| ||||||||||||
Sbjct 7306324 GATCTC--ACAGCTCTGCACTGTTCATGACGAATAGTGTTGTTCCTTCGCGTCTTATCAG 7306267
Query 1523 CAAAGATTGTATTTTGATCGGCTGTTTAGCACTACT-G--TGAGTGCTT-GAAAAGATAG 1578
|| ||| ||||||||||| |||||| ||||| | | ||| | ||| ||||||||||
Sbjct 7306266 GAATGATCGTATTTTGATCAGCTGTTCTGCACTGTTAGCGTGAATACTTTGAAAAGATAG 7306207
Query 1579 TCCTCCACATGAAATTAGAACTAACCG-TCCTTTCAAAGTCTTGAG-ACATGACCCATGG 1636
| || |||||||||||||||||| || |||||||||| ||| ||| ||||||| ||||
Sbjct 7306206 TAATCTACATGAAATTAGAACTAAACGGTCCTTTCAAAATCT-GAGGACATGACATATGG 7306148
Query 1637 GCGATGCCAGATGCCATTAATTCTCTCTTGTTGGTGTCCTCTGGTGAGAATAGTGGCGCT 1696
||||||| |||||||||||||| ||| ||| || | | |||| || ||||||| |||
Sbjct 7306147 ACGATGCCCGATGCCATTAATTCGCTCCTGT-GG-G-CATCTGA-GAAAATAGTGTTGCT 7306092
Query 1697 GCTAAAAGCT 1706
||||| |||
Sbjct 7306091 TCTAAATGCT 7306082
Score = 691 bits (374), Expect = 0.0
Identities = 744/916 (81%), Gaps = 51/916 (6%)
Strand=Plus/Minus
Query 3483 AACACTATAATTTTGCATCAGTGACATTTTCAGATTCCAATCGTGCAGGTATCCTACCGA 3542
||||||| ||| || || | | |||||| || ||| |||| | ||||||||| || ||
Sbjct 7303821 AACACTACAATGGTGTATTACTCACATTTACATATTTCAATTCTACAGGTATCCAACTGA 7303762
Query 3543 TGGTGATAAGCAAATGCTAGCAAAACAAACAGGCTTGACACGCAACCAGGTAAATAGAAA 3602
|||||| |||||||||||||| ||||||||||| || ||||| || ||||||| ||||||
Sbjct 7303761 TGGTGACAAGCAAATGCTAGCTAAACAAACAGGTTTAACACGGAATCAGGTAATTAGAAA 7303702
Query 3603 TGCTTCTAGGTGTGTTCAAGAATAGATTGCACA--GT-ATA---T-CA-GGCTA--GA-T 3651
|| || || |||||| | |||||||||| | | || || | | ||| || |
Sbjct 7303701 TGTTTTTA-TTGTGTTTACGAATAGATTGTATATCGTGCTACCTTGTACTTCTAGTGATT 7303643
Query 3652 TGTTTTGTTTTCAGGACATTTTGATTGAATTTGTG--ATGCTG---GTGCAGGTATCGAA 3706
|||||||||| || || ||||| || ||| |||||| || ||||||| ||
Sbjct 7303642 TGTTTTGTTTGTTTGAAGTTCAAATTGATTTAGTGATATGCTGTCTTTGTAGGTATCAAA 7303583
Query 3707 CTGGTTTATCAACGCAAGGGTTAGGTTGTGGAAGCCAATGGTGGAAGAAATTCACAACCT 3766
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 7303582 CTGGTTTATCAACGCAAGGGTTAGATTGTGGAAGCCAATGGTGGAAGAAATTCACAACCT 7303523
Query 3767 AGAGATGAGGCAAATGCACAAGCACTCGGTGGTTGACAAGGGCCAGCATAGCGTGCATCA 3826
|||||||||||| |||| |||||||| ||| |||||||||| |||||| || |||||||
Sbjct 7303522 AGAGATGAGGCAGCTGCATAAGCACTCAGTGCTTGACAAGGGTCAGCATGGCATGCATCA 7303463
Query 3827 TCAGGCCCAGCATTCTTCGCAGTGCAGCGGGAATCCCTCCGTTCCTTCGGACTCCCATCC 3886
||||| |||||||| |||||||| |||||||| ||||||| |||||| || || |||||
Sbjct 7303462 GCAGGCGCAGCATTCATCGCAGTGTAGCGGGAAGCCCTCCGATCCTTCAGATTCGCATCC 7303403
Query 3887 TGGACAGAGCAGCAGCATAACCCGGAACCACAACACCGCTGCCTCCCAGGGCTTCCCGGA 3946
|||||||||||||||||| || || ||||||||| || |||| || || |||||||| ||
Sbjct 7303402 TGGACAGAGCAGCAGCATCACTCGCAACCACAACGCCACTGCTTCTCATGGCTTCCCTGA 7303343
Query 3947 TGAGCTCTCCCAGATGTCCCAGTCCATCCAGGGACAGGTGAGCTTCGCATACAACGGGCT 4006
||||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||| ||
Sbjct 7303342 TGAGCTCTCCCAGATGTCCCAATCCATCCAGGGGCAGGTGAACTTCGCATACGACGGACT 7303283
Query 4007 GACCTCGCAGCACAACATTGCATCACCACATCATCAGCACCAGCAGGTCG--GCGGT-G- 4062
| ||||||||||||||||||| ||||||||||| | |||| |||||||| || | |
Sbjct 7303282 GTCCTCGCAGCACAACATTGCTTCACCACATCA--A-CACCGGCAGGTCGCTGCCATAGG 7303226
Query 4063 --TTGGTA-T--CG--GA-GGCG--G---C----AATGGCGGTGTCTCCCTCACCCTTGG 4105
|||| | | || | |||| | | ||||| || |||||||| || || ||
Sbjct 7303225 CATTGGCAGTGGCGTCGCCGGCGCTGGTACCGGCAATGGTGGAGTCTCCCTGACGCTGGG 7303166
Query 4106 TCTTCACCAGAACAACAGGGTCTGCATCGCCGAGCCTCTCCCGGCTGCTCTCCCGGCCAA 4165
||| ||||||||||| ||| ||||||| || || || || || ||||||||| ||||
Sbjct 7303165 TCTCCACCAGAACAATAGGATCTGCATGGCTGAACCACTACCAAATGCTCTCCCTCCCAA 7303106
Query 4166 CCTAGCTCACCGTTTCGGACTGGAGGAAGTCAGTGACGCCTATGTGATGAGCTCATTTGG 4225
|||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||
Sbjct 7303105 CCTAGCTCACCGTTTCGGGCTGGAGGATGTCAGCGACGCCTATGTGATGGGCTCATTTGC 7303046
Query 4226 AGGTCAGGACCGGCATTTCGGGAAGGAGATTGGTGGTCACTTGCTGCATGATTTTGTCGG 4285
||||| |||||||||||| || || |||||||||| |||||||| ||||||||||| ||
Sbjct 7303045 AGGTCCGGACCGGCATTTTGG-AA--AGATTGGTGGCCACTTGCTTCATGATTTTGTTGG 7302989
Query 4286 GTGATTGTGGCTGCTGCCTCAGGTTGCTGGTGAT--GCACTTGTAATGTACTGCTAGTAT 4343
||||| ||||||||||| || | | | | |||| |||| |||||||||||||||||
Sbjct 7302988 GTGATGGTGGCTGCTGCATCTGAT-GAAG-TGATATGCACCTGTAATGTACTGCTAGT-- 7302933
Query 4344 GATGTTAGGATGGTAT 4359
| ||||||||||||||
Sbjct 7302932 G-TGTTAGGATGGTAT 7302918
Score = 440 bits (238), Expect = 1e-120
Identities = 585/747 (78%), Gaps = 46/747 (6%)
Strand=Plus/Minus
Query 1786 GTACAATGTAGAAAGCTTCTATTTTTGGAACCCTCTGTAAGGCAATTTTGTTTGCCTGTG 1845
||||| ||||| ||| || |||||| |||| || | ||| ||||||||||| | | |
Sbjct 7306036 GTACAGTGTAGTAAGGTTTTATTTTGGGAA---TCGCTCAGGAAATTTTGTTTGGCCGAG 7305980
Query 1846 TTCTTCAAT-AGCATCTCTCTCCCATAATTGGGAGCTACGCTTGCTTTGTTCGTGTCATA 1904
|| | | ||||||| ||||||||||||||||| || | |||||| | | |||| ||
Sbjct 7305979 TTAACTAGTAAGCATCTTTCTCCCATAATTGGGAGGTAGGATTGCTTCGGTTATGTCGTA 7305920
Query 1905 TCCACATGAAAACAAAAGCACACTGCTTCCTTTTCCTAAC-ATGGATAT-C-TTTTT--- 1958
||||| |||||||||||||| |||| ||| |||| ||||| ||| | | |||||
Sbjct 7305919 TCCACTTGAAAACAAAAGCATACTG-TTCTTTTTGCTAACTTTGGTGCTCCATTTTTAAG 7305861
Query 1959 -----ATC-TAATCATTCTTTGTTGGTAGATTATC-TCTCATCGAATTCTAACCCAACAG 2011
||| || | || ||| || || |||| | | || | |||||| || |||
Sbjct 7305860 AAGAAATCGAAAGCGTT-TTTATTCGTCTCCTATCTTGTTCTC-AGTTCTAA-CC--CAG 7305806
Query 2012 CAAT-ATCtttttttAGGTTTGCAAGAGGTACCGGCAGTACTACCAGCAGGTTCAGGCTG 2070
| ||| || |||||||||||||| ||||||||||| || |||||||| || ||||
Sbjct 7305805 TTTTAATCGCTTGCTAGGTTTGCAAGAGATACCGGCAGTATTATCAGCAGGTCCAAGCTG 7305746
Query 2071 TGATGGCCTCGTTCGAGACCGTCGCCGGGTTCAGCAACGCCGCGCCGTTCGCGGCATTGG 2130
||||||||||||| ||||| ||||| || |||||||| ||||| |||||| | || ||||
Sbjct 7305745 TGATGGCCTCGTTTGAGACAGTCGCGGGATTCAGCAATGCCGCCCCGTTCACTGCGTTGG 7305686
Query 2131 CGCTGAGGGCGATGGCGAAGCACTTCAAGTGCTTGAAGAGCATGATTCTGAACCAGCTGC 2190
| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct 7305685 CACTGAGGGCGATGGCGAAGCACTTCAAGTACTTGAAGGGCATGATACTGAACCAGCTGC 7305626
Query 2191 GCAACACGAGCAACAAG--GTC-GCTGTGAAGGACGGGCTAAACAAGGAGATCGCCGTGT 2247
|||||||||||| |||| | | | || ||||| | | || |||||| ||||| |||
Sbjct 7305625 GCAACACGAGCAGCAAGCAGCCAGGTGCCAAGGAAAG-C-AA-CAAGGACGTCGCCATGT 7305569
Query 2248 TCGGGCTCGCCGGGGGTAGCAGCGGCGGCGCCGGCCTCCAGCGAGCGAACAGCGCGAGCG 2307
| ||||| ||||| || ||||| | || | ||||||||||| ||||||||||||||
Sbjct 7305568 TTGGGCTTGCCGGTGG---CAGCG-C--CG--G-CCTCCAGCGAGGGAACAGCGCGAGCG 7305518
Query 2308 CGTTCGGCCAGCCGCACAATATTTGGCGCCCACAGAGGGGGCTCCCCGAGCGCGCTGTGT 2367
||||| ||||||||| ||| ||||||||||| |||||||| || ||||||||||| ||||
Sbjct 7305517 CGTTCAGCCAGCCGCCCAACATTTGGCGCCCCCAGAGGGGACTTCCCGAGCGCGCCGTGT 7305458
Query 2368 CCGTTCTACGCGCGTGGCTGTTCGAACACTTCCTGCACCCGTAAGCCCTTTGATCTTCTT 2427
| ||||| ||||||||||||||||||||||||||||| ||||||| || | | |
Sbjct 7305457 CTGTTCTCCGCGCGTGGCTGTTCGAACACTTCCTGCATCCGTAAG---TTGGCAATGCAC 7305401
Query 2428 ATTGCTTTATGGTTAACTCTGGGTTCATTAGCTGCACGCATTCCAAGACAATGATGATGA 2487
|||||| || | || || || ||||||||||||| | || ||| | ||||||||||
Sbjct 7305400 -TTGCTTG-TGAT-AA-TCCCGGATCATTAGCTGCACACCTTTCAATAAAATGATGATGG 7305345
Query 2488 TGCTACAGTTGCTTGCTTTAGATGAGG 2514
|||||||| | ||||||||||||||||
Sbjct 7305344 TGCTACAGGTTCTTGCTTTAGATGAGG 7305318
> Scaffold_13;HRSCAF=912
Length=95470783
Score = 1219 bits (660), Expect = 0.0
Identities = 1394/1721 (81%), Gaps = 160/1721 (9%)
Strand=Plus/Plus
Query 41 GCCTTTGCAGAAAGAAGAAAGGCGCCACGAACCCAGCAACAACACCCAGCACAAAGGCGA 100
|||||||||| | |||||||||||| |||| ||||||||||||||||||||||||| ||
Sbjct 86728638 GCCTTTGCAG--A-AAGAAAGGCGCCCCGAAACCAGCAACAACACCCAGCACAAAGGTGA 86728694
Query 101 AACGGGGAAAAAGAGGA-GGAAAACAACAAG-AGGACGCGAGGGGTCGGGGT----G-GG 153
|| |||||||||| ||| |||||| |||||| ||| | | ||||||||||| | ||
Sbjct 86728695 AAGGGGGAAAAAG-GGAGGGAAAAAAACAAGCTGGA-GAG-GGGGTCGGGGTGGGAGAGG 86728751
Query 154 ---A-G-A--G-GGAGGCTACACTACAGCAG-CAGCAGAAGCAG-AGC-G-GGAGAGTGA 201
| | | | |||||||| ||||||||| |||||| ||||| || | || | | |
Sbjct 86728752 CAAAGGAAGGGAGGAGGCTAGGCTACAGCAGTCAGCAGCAGCAGCCGCAGCGGCG-G-CA 86728809
Query 202 TGAG-GGAGTGAGACCAGGCCAGCCAAG-C--CAGGCCCGGGCGCTCGGAAAGTGCGGAG 257
||| ||| ||||||||||||||| || | ||||||| |||||||| |||||||||||
Sbjct 86728810 -GAGAGGA-AGAGACCAGGCCAGCCGAGCCAGCAGGCCC-GGCGCTCGCAAAGTGCGGAG 86728866
Query 258 CCGTTTCCCCTCTATCTCCACTCTCTCCAGGGCCAGGTGCTCACTGCGCTGCGCCTCTTC 317
|||||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||||
Sbjct 86728867 CCGTTTCCTCTCTATCTCCACTCTCTCCAGGGCCAGGTTCTCACTGCGCTGCG-CGCTTC 86728925
Query 318 GCACGCACCACCCGTACTACGTGCCCACCCGCGCGCGCGCCGAGGAGAAGAGACCCACGA 377
|| | | ||||||| ||||| ||||||| | || | | ||| | |
Sbjct 86728926 GC-C-C-CCACCCG---TACGT--------GCGCGCGTG-CG-TGCG-CGAG----A-G- 86728962
Query 378 CCGTACGTGCGTGCGCGCCATGTCGTCCGCCGCTGGGGGC-GGCGGGTACGGCGGCGGCC 436
|| | | || | ||||||||||||||||| ||| || || ||||||||||| ||||
Sbjct 86728963 -CG---G-G-GT--GAGCCATGTCGTCCGCCGC-GGGTGCTGGTGGGTACGGCGG-GGCC 86729012
Query 437 AGGGTGGAGGCGCGGAGTaccaccaccaccaccacGGGCACGCCGGTCACCTCCTGCTCC 496
||| ||||||||| || || | ||||||||| ||||| ||||||||||| |
Sbjct 86729013 --GGT---GGCGCGGAG------CATCAGCGCCACGGGCATGCCGGCCACCTCCTGCTTC 86729061
Query 497 ACCACCATCCGCAGCACGTggccggcgcggccgttgcggcagcggccgcggcggcgggcg 556
| |||||| | || || | | || || | | | || || ||||||||||| |
Sbjct 86729062 AGCACCAT-C-CA-CA--T---C-ACGTGG-C--T---G--GC-GCTGCGGCGGCGGGTG 86729103
Query 557 ggcAGATGTACCACGTGCCCCAGCACAGCCGGCGCGAGAAGCTCCGGTTCCCGCCGGACG 616
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct 86729104 GGCAGATGTACCACGTGCCGCAGCATAGCCGGCGCGAGAAGCTCCGGTTCCCGCCCGACG 86729163
Query 617 CCGGGGACTCGCCACCGCCTCATGGTCATGGTCATGGTCATGCCCCgcagcagcagcagc 676
||| |||| || ||||||||||||||||| ||| |||| | | | || |||||| |
Sbjct 86729164 CCGCGGACGCGTCACCGCCTCATGGTCAT-GTCCCGGTC--CCGCAGGAGGAGCAGCCTC 86729220
Query 677 agcaCGGGTCGTGGCCTCCGCCCCCGGCGTTCTACTCGTACGCGTCCTCGTCGTCGTCGT 736
|||||||| |||||||||||| ||||| ||||||||||| |||||||| || |||||||
Sbjct 86729221 AGCACGGGATGTGGCCTCCGCCGCCGGCCTTCTACTCGTATGCGTCCTCCTCCTCGTCGT 86729280
Query 737 ACTCCCCGCACAGCCCTACTCTAGCGCAGGCGCAGCTGGTGGCGCACGGGCTGGCGCCGC 796
|||| ||||||||||| || || | |||||||||||| |||||||||| ||||||||||
Sbjct 86729281 ACTCTCCGCACAGCCCAACGCTTGTCCAGGCGCAGCTGATGGCGCACGGTCTGGCGCCGC 86729340
Query 797 CGCTCCCGCAGATCCCGACGCAGAACTTCTCGCTGTCGCTCTCCTCCGCGTCGTCGAATC 856
|||||||||||||||||||||| |||||||||||| | || || ||||||||||||||
Sbjct 86729341 CGCTCCCGCAGATCCCGACGCACAACTTCTCGCTGACCCTGTCATCCGCGTCGTCGAA-- 86729398
Query 857 CTCCACCACCGCAGGCGCAGCCGAGGAGGCAGCTCGGCGGCCTCGCGCAGGCCACGGGGC 916
| || || | ||||||||||||||||| | |||||| |||||||||||||||||
Sbjct 86729399 ---C-CCTCCTC---CGCAGCCGAGGAGGCAGTTGAGCGGCCCCGCGCAGGCCACGGGGC 86729451
Query 917 CGTTCGGTCCCTTCACCGGCTACGCCGCCGTGCTCGGCCGGTCCCGTTTCCTCGGCCCGG 976
||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 86729452 CGTTCGGGCCCTTCACTGGCTATGCCGCCGTGCTTGGCCGGTCCCGTTTCCTCGGCCCGA 86729511
Query 977 CAGAGAAGCTGTTCGAGGAGATCTGCGACGTCGGCGGCGCTGCTTCGCACGTCGACCGCA 1036
| |||||||| |||||||||||||||||||||||||||||||| |||||||||| || |
Sbjct 86729512 CGGAGAAGCTTTTCGAGGAGATCTGCGACGTCGGCGGCGCTGCAGCGCACGTCGAGCGTA 86729571
Query 1037 CCATCTCCGACGAGGGCCTGCTCGACGCGGATCCGATGGACGGCGTCGATCATGACGTCG 1096
|| |||||||||| | ||| ||||| || |||||||||||||||| | | | || | |
Sbjct 86729572 CCTTCTCCGACGATGCCCTTCTCGAAGCAGATCCGATGGACGGCG-C--TGA-CAC-T-G 86729625
Query 1097 TTGATCACGACCTCGGCGGCGCTGACCGCGCAGCGGCCGACGCTGGCCCCATCTCGGGGG 1156
| ||||| || | | || | |||||||| ||||| ||||||||||||||||| || |
Sbjct 86729626 TCGATCATGA-AT--TC-GC-C-GACCGCGCCGCGGCAGACGCTGGCCCCATCTCTGGCG 86729679
Query 1157 CCGAGCAGCAGTGGAAGAAGACGAAGCTCATCTCCATGATGGAAGAGGTGA---GTGAGC 1213
| || ||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 86729680 CAGAACAGCAGTGGAAGAAGACGAGGCTCATCTCCATGATGGAAGAGGTGAGTGGTGAGC 86729739
Query 1214 TCCGCTAGCCGCCTC-A---ATTCCTCCTTCCAGGTTTCTTGTGGCGACCATCTTTTTCA 1269
| |||||| |||||| | ||||| |||||||||||||||||||| ||||||||||||
Sbjct 86729740 T-CGCTAGGCGCCTCAATTCATTCCCCCTTCCAGGTTTCTTGTGGCATCCATCTTTTTCA 86729798
Query 1270 CCTTGTTTCGGCGTTACAATTATCGCTACTCCTGGGTGGAGAAGAATCTTGCACATAGTG 1329
||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 86729799 CCTTGTTTCGGCGTTACAATTATCGCTCGTCCTGGGTGGAGAAGAATCTTGCCCATAGTG 86729858
Query 1330 GTCATGTCACCGATGCAGTTGCGGATTGCTTTTATTTACTGTGGTTGCATGTGCTTTTGA 1389
|||| |||| ||| ||||||| || |||||||| |||||||| |||||||||||||||||
Sbjct 86729859 GTCACGTCATCGACGCAGTTGTGGCTTGCTTTTGTTTACTGTTGTTGCATGTGCTTTTGA 86729918
Query 1390 TTTGATGATGATTTCCTTTGCTGCTGATACATCTTTTGATTTGTTCTCTCTCTTCTTTTT 1449
|||||||||||||||||||| | | | | |||||||||||||||| | | | | |||||
Sbjct 86729919 TTTGATGATGATTTCCTTTGGTCCAGTTCCATCTTTTGATTTGTT-T-T-T-T-CTTTTG 86729973
Query 1450 CCTCGAGTGGTTTGAGCTTGTACAGTTCTGCACTGTTCATGATGAATAGTGGTGTTCCTC 1509
| | | ||||||||| ||| || |||||||||||||| ||| | || ||||| |
Sbjct 86729974 --T-G--T--TTTGAGCTT--ACATTTTTGCACTGTTCATGACGAACATTGTTGTTCTTT 86730024
Query 1510 CGCGTCTTATCACCAAAGATTGTATTTT-GATCGGCTGTTTAGCACTA---CTGTGAGTG 1565
|| |||||||||| ||||| ||||||| |||| |||||| || ||| ||||| ||
Sbjct 86730025 CGTGTCTTATCACGAAAGACCGTATTTTTGATCAGCTGTTCAGTACTGTGGCTGTGGGTA 86730084
Query 1566 CTTGAAAAGATAGTCCTCCA------CATGAAATT--AGAACTAACCG-TCCTTTCAAAG 1616
||| |||||||||| || | ||||||||| |||||||| || ||||||||||
Sbjct 86730085 CTTCAAAAGATAGTAATCTAGGAGTACATGAAATTTTAGAACTAAACGGTCCTTTCAAAA 86730144
Query 1617 TCTTGAGACATGACCCATGGGCGATGCCAGATGCCATTAATTCTCTCTTGTTGGTGTCCT 1676
||| | |||||||| |||| ||| |||||||||||||||||||||| || | |||| |
Sbjct 86730145 TCTGGGGACATGACTAATGGACGACGCCAGATGCCATTAATTCTCTCCTG--G-TGTCAT 86730201
Query 1677 CTGGTGAGAATAGTGGCGCTGCTAAAAGCTTCGAGCTTTGA 1717
||| || ||||||| |||| ||||| |||| |||||||||
Sbjct 86730202 CTGACGAAAATAGTGACGCTTCTAAATGCTTTGAGCTTTGA 86730242
Score = 645 bits (349), Expect = 0.0
Identities = 699/865 (81%), Gaps = 36/865 (4%)
Strand=Plus/Plus
Query 3517 TTCCAATCGTGCAGGTATCCTACCGATGGTGATAAGCAAATGCTAGCAAAACAAACAGGC 3576
|||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct 86731951 TTCCAATC-TGCAGGTATCCATCTGATGGTGATAAGCAAATGCTAGCTAAACAAACAGGT 86732009
Query 3577 TTGACACGCAACCAGGTA--AATAGAAATGC-TTCTAGGTGTGT-TCAAGAATAGATTGC 3632
|| ||||| || |||||| | | ||| || |||| ||| | || || | |||
Sbjct 86732010 TTAACACGGAATCAGGTACGGAAA-AAAGGCTTTCT-TTTGTATATC-AGGCTGCATTCT 86732066
Query 3633 ACAGTATATCAGGCTAGATTGTTTTGTTTTCAGGACATTTTGATTGAATTTGTGATGCTG 3692
|| | ||| | || | ||| |||| | ||| || |||||| | |||||||||
Sbjct 86732067 CCA-TCCATC-TTCCAG-TGATTTCTTTTTGA-GACGTTCTGATTGGTGTGGTGATGCTG 86732122
Query 3693 GTGCAGGTATCGAACTGGTTTATCAACGCAAGGGTTAGGTTGTGGAAGCCAATGGTGGAA 3752
|||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct 86732123 TTGCAGGTATCAAACTGGTTCATCAACGCCAGGGTTAGACTGTGGAAGCCAATGGTGGAA 86732182
Query 3753 GAAATTCACAACCTAGAGATGAGGCAAATGCACAAGCACTCGGTGGTTGACAAGGGCCAG 3812
|| || |||||||| |||||| |||| ||||| |||||||||||| | |||||||| |||
Sbjct 86732183 GAGATCCACAACCTCGAGATGCGGCAGATGCATAAGCACTCGGTGCTCGACAAGGGTCAG 86732242
Query 3813 CATAGCGTGCATCATCAGGCCCAGCATTCTTCGCAGTGCAGCGGGAATCCCTCCGTTCCT 3872
||| || ||||||||||||||||||||| || ||||| ||||||| ||||| | ||||
Sbjct 86732243 CATGGCACGCATCATCAGGCCCAGCATTCGTCCCAGTGTGGCGGGAAGCCCTCTGATCCT 86732302
Query 3873 TCGGACTCCCATCCTGGACAGAGCAGCAGCATAACCCGGAACCACAACACCGCTGCCTCC 3932
|| ||||| ||||||||||||||||||||||| || || |||||||||| |||||| ||
Sbjct 86732303 TCCGACTCGCATCCTGGACAGAGCAGCAGCATCACTCGCAACCACAACAACGCTGCTTCT 86732362
Query 3933 CAGGGCTTCCCGGATGAGCTCTCCCAGATGTCCCAGTCCATCCAGG-G-A--CAG-G-TG 3986
|| ||||||||||||||||||||||||||||||||||||||||||| | | | | | ||
Sbjct 86732363 CACGGCTTCCCGGATGAGCTCTCCCAGATGTCCCAGTCCATCCAGGAGCAGGCGGCGGTG 86732422
Query 3987 AGCTTCGCATACAACGGGCTGACCTCGCAGCACAACATTGCATCACCACATCATCAGCAC 4046
| |||||| |||||||| | |||||| ||||||| ||||||| || || || || |||
Sbjct 86732423 AACTTCGCTTACAACGGTTTCTCCTCGCTGCACAACGTTGCATCGCCGCACCAACAACAC 86732482
Query 4047 CAGCAG--G-TCGGCGGTGTTGGTATCGGAGGCGGCAATGGCGGTGTCTCCCTCACCCTT 4103
|||||| | ||| ||||| || | | | |||||| ||||| ||||| ||||||||
Sbjct 86732483 CAGCAGCAGGTCGCCGGTGGCGGCAACA-A--CGGCAACGGCGGGGTCTCTCTCACCCTC 86732539
Query 4104 GGTCTTCACCAGAACAACAGGGTCTGCATCGCCGAGCCTCTCCCG--GC-TGCTCTCCCG 4160
||||| |||||||||||||||||||||||| ||||||| |||||| || ||| ||||||
Sbjct 86732540 GGTCTCCACCAGAACAACAGGGTCTGCATCACCGAGCCGCTCCCGACGCATGCCCTCCCG 86732599
Query 4161 GCCAACCTAGCTCACCGTTTCGGACTGGAGGAAGTCAGTGACGCCTATGTGATGAGCTCA 4220
|||||||||||||||| ||||| |||||||| ||||| |||||||| |||||| ||||
Sbjct 86732600 CCCAACCTAGCTCACCGCTTCGGGCTGGAGGATGTCAGCGACGCCTACGTGATGGGCTCG 86732659
Query 4221 TTTGGAGGTCAGGACCGGCATTTCGGGAAGGAGATTGGTGGTCACTTGCTGCATGATTTT 4280
|| ||||||||||| ||||||| || |||||||| ||||||||||| ||||||||||||
Sbjct 86732660 TTCGGAGGTCAGGAGAGGCATTTTGGAAAGGAGATCGGTGGTCACTTCCTGCATGATTTT 86732719
Query 4281 GTCGGGTGATT--G-TGGCTGCTGC--C-TCAGGTTGCTGGTGATGCACTTGTAATGTAC 4334
|| || ||| | |||||||||| | | | | | |||| |||| |||| | |||
Sbjct 86732720 GTTGGCTGACGACGGTGGCTGCTGCTGCCTGATATATCAAGTGACGCACCTGTATTTTAC 86732779
Query 4335 TGCTAGTATGATGTTAGGATGGTAT 4359
| |||||||| | | ||||||||||
Sbjct 86732780 TCCTAGTATG-T-T-AGGATGGTAT 86732801
Score = 425 bits (230), Expect = 4e-116
Identities = 341/395 (86%), Gaps = 6/395 (2%)
Strand=Plus/Plus
Query 2024 ttAGGTTTGCAAGAGGTACCGGCAGTACTACCAGCAGGTTCAGGCTGTGATGGCCTCGTT 2083
||||||||||||||| |||||||||||||| |||||||| || |||||||||||||||||
Sbjct 86730519 TTAGGTTTGCAAGAGATACCGGCAGTACTATCAGCAGGTCCAAGCTGTGATGGCCTCGTT 86730578
Query 2084 CGAGACCGTCGCCGGGTTCAGCAACGCCGCGCCGTTCGCGGCATTGGCGCTGAGGGCGAT 2143
||||| ||||| || |||||||| ||||| |||||||| || ||||| |||||||||||
Sbjct 86730579 TGAGACTGTCGCGGGATTCAGCAATGCCGCCCCGTTCGCTGCGTTGGCACTGAGGGCGAT 86730638
Query 2144 GGCGAAGCACTTCAAGTGCTTGAAGAGCATGATTCTGAACCAGCTGCGCAACACGAGCAA 2203
||| |||||||||||||||||||||| |||||| || |||||||||||||| ||||||||
Sbjct 86730639 GGCCAAGCACTTCAAGTGCTTGAAGAACATGATACTTAACCAGCTGCGCAATACGAGCAA 86730698
Query 2204 CAAGGTCGCTGTGAAGGACGGGCT-A--AACAAGGAGATCGCCGTGTTCGGGCTCGCCGG 2260
||||| |||| |||||||| || | |||||||| |||| ||||| ||||| |||||
Sbjct 86730699 CAAGGCTGCTGCCAAGGACGGCCTAAGCAACAAGGATGTCGCTGTGTTTGGGCTTGCCGG 86730758
Query 2261 GGGTA--G-CAGCGGCGGCGCCGGCCTCCAGCGAGCGAACAGCGCGAGCGCGTTCGGCCA 2317
|| | | | ||| |||||||||||||||||||| ||||| || |||||||| | ||
Sbjct 86730759 CGGCAGCGTCGGCGCCGGCGCCGGCCTCCAGCGAGGGAACAATGCCAGCGCGTTTGTTCA 86730818
Query 2318 GCCGCACAATATTTGGCGCCCACAGAGGGGGCTCCCCGAGCGCGCTGTGTCCGTTCTACG 2377
||| ||||| ||||||||||| ||||||||||| |||||||| || ||||| ||||| ||
Sbjct 86730819 GCCCCACAACATTTGGCGCCCTCAGAGGGGGCTTCCCGAGCGTGCCGTGTCTGTTCTCCG 86730878
Query 2378 CGCGTGGCTGTTCGAACACTTCCTGCACCCGTAAG 2412
||||||||||||||||||||||||||| |||||||
Sbjct 86730879 CGCGTGGCTGTTCGAACACTTCCTGCATCCGTAAG 86730913
> Scaffold_70;HRSCAF=1591
Length=111429323
Score = 311 bits (168), Expect = 1e-81
Identities = 468/611 (77%), Gaps = 27/611 (4%)
Strand=Plus/Plus
Query 3695 GCAGGTATCGAACTGGTTTATCAACGCAAGGGTTAGGTTGTGGAAGCCAATGGTGGAAGA 3754
||||||||| |||||||| ||||| ||||||||||| | ||||||||||||||||||||
Sbjct 50113060 GCAGGTATCCAACTGGTTCATCAATGCAAGGGTTAGACTCTGGAAGCCAATGGTGGAAGA 50113119
Query 3755 AATTCACAACCTAGAGATGAGGCAAATGCACAAGCACTCGGTGG-TTGACAAGGGCCAGC 3813
||||||||| || ||||||| ||| |||| ||| | || | |||||||| |||||
Sbjct 50113120 AATTCACAATCTTGAGATGAAGCAGCTGCAGAAGAA-TCCTTCTCTTGACAAGAACCAGC 50113178
Query 3814 ATAGCGTGCATCATCAGGCCCAGCATTCTTC-G-CAGTGCAGCGGGAATCCCTCCGTTCC 3871
| |||| || || | || ||||| || | ||| ||||||||| ||||| | |||
Sbjct 50113179 TCCCCATGCAGCA-CA--CTCAACATTCGTCTGACAG--CAGCGGGAAGCCCTCTGATCC 50113233
Query 3872 TTCGGACTCCCATCCTGGACAGAGCAGCAGCATAACCCGGAACCACAACACCGCTGCCTC 3931
|| |||||| | || || | |||||||| || ||||||||| | | |||| |
Sbjct 50113234 ATCAAACTCCCTGCAAGGGCAAGGTAGCAGCATGACTAGGAACCACAGCGTCAATGCCAC 50113293
Query 3932 CCAGGGCTTCCCGGATGAGCTCTCCCAGATGTCCCAGTCCATC-CAGGGACAGGTGAGCT 3990
|| | || |||| ||||||||||||| |||| |||| |||| |||||||||||
Sbjct 50113294 CCGTCACATCGAAGATGGGCTCTCCCAGATGCCCCATGACATCTCAGG-ACAGGTGAGCT 50113352
Query 3991 TCGCATACAACGGGCTGACCTCGCAGCACAACATTGCATCACCACATCATCAGCACCAGC 4050
| || ||||||||||| |||||||| |||| |||||||| | || | ||||| || |
Sbjct 50113353 TTGCTTACAACGGGCTCACCTCGCATCACAGCATTGCATTGTCTCACCCCCAGCAGCAAC 50113412
Query 4051 AGG---TC---GGCGGTGTTGGTATCGGAGGCGGCAAT-G--GC-GGTGTCTCCCTCACC 4100
| | || |||| | |||| || | | |||| | || |||||||| ||||||
Sbjct 50113413 ACGACCTCATTGGCGCCGGTGGT---GGTG-CTGCAAACGCCGCTGGTGTCTCACTCACC 50113468
Query 4101 CTTGGTCTTCACCAGAACAACAGGGTCTGCATCGCCGAGCCTCTCCCGGCTGCTCT-CCC 4159
||||| ||||||||||||||| ||| | ||| || ||||| || || || || || |||
Sbjct 50113469 CTTGGCCTTCACCAGAACAACCGGGCTTACATTGCTGAGCCCCTGCCAGCCGCCCTTCCC 50113528
Query 4160 GGCCAACCTAGCTCACCGTTTCGGACTGGAGGAAGTCAGTGACGCCTATGTGATGAGCTC 4219
||||| || ||||| |||||||||||||| |||||||| ||||||||||| ||||
Sbjct 50113529 CTG-AACCTCGCCCACCGGTTCGGACTGGAGGATGTCAGTGATCCCTATGTGATGGGCTC 50113587
Query 4220 ATTTGGAGGTCAGGACCGGCATTTCGGGAAGGAGATTGGTGGTCACTTGCTGCATGATTT 4279
||||||||| |||||||||||||||| |||||||| |||||||| ||||| ||||| ||
Sbjct 50113588 ATTTGGAGGCCAGGACCGGCATTTCGCCAAGGAGATCGGTGGTCATTTGCTCCATGACTT 50113647
Query 4280 TGTCGGGTGAT 4290
||| |||||||
Sbjct 50113648 TGTAGGGTGAT 50113658
Score = 311 bits (168), Expect = 1e-81
Identities = 468/611 (77%), Gaps = 27/611 (4%)
Strand=Plus/Plus
Query 3695 GCAGGTATCGAACTGGTTTATCAACGCAAGGGTTAGGTTGTGGAAGCCAATGGTGGAAGA 3754
||||||||| |||||||| ||||| ||||||||||| | ||||||||||||||||||||
Sbjct 50313873 GCAGGTATCCAACTGGTTCATCAATGCAAGGGTTAGACTCTGGAAGCCAATGGTGGAAGA 50313932
Query 3755 AATTCACAACCTAGAGATGAGGCAAATGCACAAGCACTCGGTGG-TTGACAAGGGCCAGC 3813
||||||||| || ||||||| ||| |||| ||| | || | |||||||| |||||
Sbjct 50313933 AATTCACAATCTTGAGATGAAGCAGCTGCAGAAGAA-TCCTTCTCTTGACAAGAACCAGC 50313991
Query 3814 ATAGCGTGCATCATCAGGCCCAGCATTCTTC-G-CAGTGCAGCGGGAATCCCTCCGTTCC 3871
| |||| || || | || ||||| || | ||| ||||||||| ||||| | |||
Sbjct 50313992 TCCCCATGCAGCA-CA--CTCAACATTCGTCTGACAG--CAGCGGGAAGCCCTCTGATCC 50314046
Query 3872 TTCGGACTCCCATCCTGGACAGAGCAGCAGCATAACCCGGAACCACAACACCGCTGCCTC 3931
|| |||||| | || || | |||||||| || ||||||||| | | |||| |
Sbjct 50314047 ATCAAACTCCCTGCAAGGGCAAGGTAGCAGCATGACTAGGAACCACAGCGTCAATGCCAC 50314106
Query 3932 CCAGGGCTTCCCGGATGAGCTCTCCCAGATGTCCCAGTCCATC-CAGGGACAGGTGAGCT 3990
|| | || |||| ||||||||||||| |||| |||| |||| |||||||||||
Sbjct 50314107 CCGTCACATCGAAGATGGGCTCTCCCAGATGCCCCATGACATCTCAGG-ACAGGTGAGCT 50314165
Query 3991 TCGCATACAACGGGCTGACCTCGCAGCACAACATTGCATCACCACATCATCAGCACCAGC 4050
| || ||||||||||| |||||||| |||| |||||||| | || | ||||| || |
Sbjct 50314166 TTGCTTACAACGGGCTCACCTCGCATCACAGCATTGCATTGTCTCACCCCCAGCAGCAAC 50314225
Query 4051 AGG---TC---GGCGGTGTTGGTATCGGAGGCGGCAAT-G--GC-GGTGTCTCCCTCACC 4100
| | || |||| | |||| || | | |||| | || |||||||| ||||||
Sbjct 50314226 ACGACCTCATTGGCGCCGGTGGT---GGTG-CTGCAAACGCCGCTGGTGTCTCACTCACC 50314281
Query 4101 CTTGGTCTTCACCAGAACAACAGGGTCTGCATCGCCGAGCCTCTCCCGGCTGCTCT-CCC 4159
||||| ||||||||||||||| ||| | ||| || ||||| || || || || || |||
Sbjct 50314282 CTTGGCCTTCACCAGAACAACCGGGCTTACATTGCTGAGCCCCTGCCAGCCGCCCTTCCC 50314341
Query 4160 GGCCAACCTAGCTCACCGTTTCGGACTGGAGGAAGTCAGTGACGCCTATGTGATGAGCTC 4219
||||| || ||||| |||||||||||||| |||||||| ||||||||||| ||||
Sbjct 50314342 CTG-AACCTCGCCCACCGGTTCGGACTGGAGGATGTCAGTGATCCCTATGTGATGGGCTC 50314400
Query 4220 ATTTGGAGGTCAGGACCGGCATTTCGGGAAGGAGATTGGTGGTCACTTGCTGCATGATTT 4279
||||||||| |||||||||||||||| |||||||| |||||||| ||||| ||||| ||
Sbjct 50314401 ATTTGGAGGCCAGGACCGGCATTTCGCCAAGGAGATCGGTGGTCATTTGCTCCATGACTT 50314460
Query 4280 TGTCGGGTGAT 4290
||| |||||||
Sbjct 50314461 TGTAGGGTGAT 50314471
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 5577498962392
Database: zizania_palustris_13Nov2018_okGsv.fasta
Posted date: Jul 9, 2019 4:10 PM
Number of letters in database: 1,288,768,912
Number of sequences in database: 2,183
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5