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OsQSH1_b_out.txt
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OsQSH1_b_out.txt
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BLASTN 2.2.28+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: zizania_palustris_13Nov2018_okGsv.fasta
2,183 sequences; 1,288,768,912 total letters
Query= AB071333.1 Oryza sativa Japonica Group qSH-1 gene for qSH-1,
complete cds
Length=4496
Score E
Sequences producing significant alignments: (Bits) Value
Scaffold_1063;HRSCAF=3427 1301 0.0
Scaffold_13;HRSCAF=912 1227 0.0
Scaffold_70;HRSCAF=1591 316 2e-83
> Scaffold_1063;HRSCAF=3427
Length=42614780
Score = 1301 bits (704), Expect = 0.0
Identities = 1259/1510 (83%), Gaps = 105/1510 (7%)
Strand=Plus/Minus
Query 279 AAGCCAGGCCCGGGCGCTCGGAAAGTGCGGAGCCGTTTCCCCTCTATCTCCACTCTCTCC 338
||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 7307515 AAGCCAGGCCC-GGCGCTCGGAAAGTGCGGAGCCGTTTCCCCTCTATCTCAACACTCTCC 7307457
Query 339 A-GGGC-CAGGTGCTCACTGCGCTGCGCCTCTTCGCACGCACC-ACCCGTACTACGTGCC 395
| |||| |||||||||| ||||| || | | |||||| ||||| ||||||
Sbjct 7307456 AGGGGCACAGGTGCTCA-----CTGCG--TC-T-G--CGCACCGACCCG---TACGTG-- 7307413
Query 396 CACCCGCGCGCGCGCCGAGGA--G-AA-GAGACCCACGACCGTACGTGCGTGCGC----- 446
|| |||||||||||||||||| | || || ||||||||||||||||||| ||||
Sbjct 7307412 CAACCGCGCGCGCGCCGAGGAGGGCAACGA-ACCCACGACCGTACGTGCGCGCGCGAGAG 7307354
Query 447 ---GCCATGTCGTCCGCCGCTGGGGGCGGCGGGTACGGCGGCGG-CCAGGGTGGAGGCGC 502
|||||||||||||||| ||||| | |||||||||| ||| ||| |||| || ||
Sbjct 7307353 AGAGCCATGTCGTCCGCCGTCGGGGGTGATGGGTACGGCGTCGGTCCA-GGTGACGGGGC 7307295
Query 503 GGAGcaccaccaccaccaccacGGGCACGCCGGTCACCTCCTGCTCCACCACCATCCGCA 562
|||||| ||| |||| ||||||||| ||||| ||||||||||| ||||||||||| ||
Sbjct 7307294 GGAGCAGCACGGCCACGTCCACGGGCATGCCGGCCACCTCCTGCTTCACCACCATCCACA 7307235
Query 563 GCACGTggccggcgcggccgttgcggcagcggccgcggcggcgggcgggcAGATGTACCA 622
|||| | ||| | || | | |||||||||||| ||||||||||||||
Sbjct 7307234 GCAC-T---------TGCC--T---GC--C-GTCGCGGCGGCGGGTGGGCAGATGTACCA 7307193
Query 623 CGTGCCCCAGCACAGCCGGCGCGAGAAGCTCCGGTTCCCGCCGGACGCCGGGGACTCGCC 682
|||||| ||||||||||| ||||||||||| ||||||||||| ||| ||| |||||||
Sbjct 7307192 CGTGCCGCAGCACAGCCGACGCGAGAAGCTGCGGTTCCCGCCTGACCCCGCGGACTCG-- 7307135
Query 683 ACCGCCTCATGGTCATGGTCATGGTCATGCCCCgcagcagcagcagcagcaCGGGTCGTG 742
||| | || | | ||||||||||| |||||||||||||||||| |||| |||
Sbjct 7307134 -CCG-C-CA----C-T--TCATGGTCATGTCCCGCAGCAGCAGCAGCA--TGGGGT-GTG 7307088
Query 743 GCCTCCGCCCCCGGCGTTCTACTCGTACGCGTCCTCGTCGTCGTCGTACTCCCCGCACAG 802
||||||||| ||| |||||||||||||||||||||| |||||||| ||||| || |||||
Sbjct 7307087 GCCTCCGCCGCCGTCGTTCTACTCGTACGCGTCCTCTTCGTCGTCATACTCTCCTCACAG 7307028
Query 803 CCCTACTCTAGCGCAGGCGCAGCTGGTGGCGCACGGGCTGGCGCCGCCGCTCCCGCAGAT 862
||| || || || ||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 7307027 CCCCACCCTGGCCCAGGCGCAGCTGGTGGCGCACGGTCTGGCTCCGCCGCTCCCGCAGAT 7306968
Query 863 CCCGACGCAGAACTTCTCGCTGTCGCTCTCCTCCGCGTCGTCGAATCCTCCACCACCGCA 922
|||||||||||||||||| ||||| |||||||| ||||||||||| ||| | | | ||||
Sbjct 7306967 CCCGACGCAGAACTTCTCTCTGTCCCTCTCCTCGGCGTCGTCGAACCCT-C-CTA-CGCA 7306911
Query 923 GGCGCAGCCGAGGAGGCAGCTCGGCGGCCTCGCGCAGGCCACGGGGCCGTTCGGTCCCTT 982
||| |||||||| || |||||| |||||||||||||| ||||| || |||||
Sbjct 7306910 ---GCA---GAGGAGGCCGCCTAGCGGCCCAGCGCAGGCCACGGGTCCGTTTGGGCCCTT 7306857
Query 983 CACCGGCTACGCCGCCGTGCTCGGCCGGTCCCGTTTCCTCGGCCCGGCAGAGAAGCTGTT 1042
||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 7306856 CACTGGCTACGCTGCCGTGCTCGGGCGGTCCCGTTTCCTCGGCCCGGCGGAGAAGCTGTT 7306797
Query 1043 CGAGGAGATCTGCGACGTCGGCGGCGCTGCTTCGCACGTCGACCGCACCATCTCCGACGA 1102
|||| ||||||||||||||||||||||||| |||||||| ||| |||||||| ||| ||
Sbjct 7306796 CGAGCAGATCTGCGACGTCGGCGGCGCTGCCGCGCACGTCCACCACACCATCTGCGAGGA 7306737
Query 1103 GGGCCTGCTCGACGCGGATCCGATGGACGGCGTCGATCATGACGTCGTTGATCACGACCT 1162
| ||||||||||||||||||||||||| | | || | |||| ||| |||||||||||
Sbjct 7306736 CGCCCTGCTCGACGCGGATCCGATGGAC-G-G-CG--C-TGACCCCGTCGATCACGACCT 7306683
Query 1163 CGGCGGCGCTGACCGCGCAGCGGCCGACGCTGGCCCCATCTCGGGGGCCGAGCAGCAGTG 1222
|||| |||| |||||||| || | ||| ||||||||||||| || ||||||||||||||
Sbjct 7306682 CGGCAGCGCCGACCGCGCCGCAGAGGACCCTGGCCCCATCTCCGGCGCCGAGCAGCAGTG 7306623
Query 1223 GAAGAAGACGAAGCTCATCTCCATGATGGAAGAGGTGA--G-TGAGCTCCGCTAGCCGCC 1279
||||||||| | |||||||||||||||||||||||||| | |||||| ||| | ||||
Sbjct 7306622 GAAGAAGACTAGGCTCATCTCCATGATGGAAGAGGTGAGTGATGAGCT-CGCAACGCGCC 7306564
Query 1280 TCAATTCCTCCTTCCAGGTTTCTTGTGGCGACCATCTTTTTCACCTTGTTTCGGCG-TTA 1338
||||||||||||||||||||||||||| | ||||| ||||| |||||||||| || |||
Sbjct 7306563 TCAATTCCTCCTTCCAGGTTTCTTGTGCCATCCATCCTTTTCTCCTTGTTTCGACGTTTA 7306504
Query 1339 CAATTATCGCTACTCCTGGGTGGAGAAGAATCTTGCACATAGTGGTCATGTCACCGATGC 1398
||||||||||| ||| ||| |||||||||||||||||||||||||| |||||| ||||
Sbjct 7306503 CAATTATCGCTCGTCCGTGGTAGAGAAGAATCTTGCACATAGTGGTCACGTCACCTATGC 7306444
Query 1399 AGTTGCGGATTGCTTTTATTTACTGTGGTTGCATGTGCTTTTGATTTGATGATGATTTCC 1458
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7306443 AGTTGCGGCTTGCTTTTATTTACTGTGGTTGCATGTGCTTTTGATTTGATGATGATTTCC 7306384
Query 1459 TTTGCTGCTGATACATCTTTTGATTTGT-T-CTCTCTCTTCTTTTT-CCTCGAGTGGTTT 1515
|||||| | |||||||||||| || ||| | ||||||||||||||| ||| | ||| |||
Sbjct 7306383 TTTGCTCCAGATACATCTTTTAATGTGTATTCTCTCTCTTCTTTTTTCCT-GTGTGTTTT 7306325
Query 1516 GAGCTTGTACAGTTCTGCACTGTTCATGATGAATAGTAGTGTTCCTCCGCGTCTTATCAC 1575
|| || |||| |||||||||||||||| ||||||| ||||||| ||||||||||||
Sbjct 7306324 GATCTC--ACAGCTCTGCACTGTTCATGACGAATAGTGTTGTTCCTTCGCGTCTTATCAG 7306267
Query 1576 CAAAGATTGTATTTTGATCGGCTGTTTAGCACTACT-G--TGAGTGCTT-GAAAAGATAG 1631
|| ||| ||||||||||| |||||| ||||| | | ||| | ||| ||||||||||
Sbjct 7306266 GAATGATCGTATTTTGATCAGCTGTTCTGCACTGTTAGCGTGAATACTTTGAAAAGATAG 7306207
Query 1632 TCCTCCACATGAAATTAGAACTAACCG-TCCTTTCAAAGTCTTGAG-ACATGACCCATGG 1689
| || |||||||||||||||||| || |||||||||| ||| ||| ||||||| ||||
Sbjct 7306206 TAATCTACATGAAATTAGAACTAAACGGTCCTTTCAAAATCT-GAGGACATGACATATGG 7306148
Query 1690 GCGATGCCAGATGCCATTAATTCTCTCTTGTTGGTGTCCTCTGGTGAGAATAGTGGCGCT 1749
||||||| |||||||||||||| ||| ||| || | | |||| || ||||||| |||
Sbjct 7306147 ACGATGCCCGATGCCATTAATTCGCTCCTGT-GG-G-CATCTGA-GAAAATAGTGTTGCT 7306092
Query 1750 GCTAAAAGCT 1759
||||| |||
Sbjct 7306091 TCTAAATGCT 7306082
Score = 784 bits (424), Expect = 0.0
Identities = 818/1001 (82%), Gaps = 55/1001 (5%)
Strand=Plus/Minus
Query 3536 AACACTATAATTTTGCATCAGTGACATTTTCAGATTCCAATCGTGCAGGTATCCTACCGA 3595
||||||| ||| || || | | |||||| || ||| |||| | ||||||||| || ||
Sbjct 7303821 AACACTACAATGGTGTATTACTCACATTTACATATTTCAATTCTACAGGTATCCAACTGA 7303762
Query 3596 TGGTGATAAGCAAATGCTAGCAAAACAAACAGGCTTGACACGCAACCAGGTAAATAGAAA 3655
|||||| |||||||||||||| ||||||||||| || ||||| || ||||||| ||||||
Sbjct 7303761 TGGTGACAAGCAAATGCTAGCTAAACAAACAGGTTTAACACGGAATCAGGTAATTAGAAA 7303702
Query 3656 TGCTTCTAGGTGTGTTCAAGAATAGATTGCACA--GT-ATA---T-CA-GGCTA--GA-T 3704
|| || || |||||| | |||||||||| | | || || | | ||| || |
Sbjct 7303701 TGTTTTTA-TTGTGTTTACGAATAGATTGTATATCGTGCTACCTTGTACTTCTAGTGATT 7303643
Query 3705 TGTTTTGTTTTCAGGACATTTTGATTGAATTTGTG--ATGCTG---GTGCAGGTATCGAA 3759
|||||||||| || || ||||| || ||| |||||| || ||||||| ||
Sbjct 7303642 TGTTTTGTTTGTTTGAAGTTCAAATTGATTTAGTGATATGCTGTCTTTGTAGGTATCAAA 7303583
Query 3760 CTGGTTTATCAACGCAAGGGTTAGGTTGTGGAAGCCAATGGTGGAAGAAATTCACAACCT 3819
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 7303582 CTGGTTTATCAACGCAAGGGTTAGATTGTGGAAGCCAATGGTGGAAGAAATTCACAACCT 7303523
Query 3820 AGAGATGAGGCAAATGCACAAGCACTCGGTGGTTGACAAGGGCCAGCATAGCGTGCATCA 3879
|||||||||||| |||| |||||||| ||| |||||||||| |||||| || |||||||
Sbjct 7303522 AGAGATGAGGCAGCTGCATAAGCACTCAGTGCTTGACAAGGGTCAGCATGGCATGCATCA 7303463
Query 3880 TCAGGCCCAGCATTCTTCGCAGTGCAGCGGGAATCCCTCCGTTCCTTCGGACTCCCATCC 3939
||||| |||||||| |||||||| |||||||| ||||||| |||||| || || |||||
Sbjct 7303462 GCAGGCGCAGCATTCATCGCAGTGTAGCGGGAAGCCCTCCGATCCTTCAGATTCGCATCC 7303403
Query 3940 TGGACAGAGCAGCAGCATAACTCGGAACCACAACACCGCTGCCTCCCAGGGCTTCCCGGA 3999
|||||||||||||||||| ||||| ||||||||| || |||| || || |||||||| ||
Sbjct 7303402 TGGACAGAGCAGCAGCATCACTCGCAACCACAACGCCACTGCTTCTCATGGCTTCCCTGA 7303343
Query 4000 TGAGCTCTCCCAGATGTCCCAGTCCATCCAGGGACAGGTGAGCTTCGCATACAACGGGCT 4059
||||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||| ||
Sbjct 7303342 TGAGCTCTCCCAGATGTCCCAATCCATCCAGGGGCAGGTGAACTTCGCATACGACGGACT 7303283
Query 4060 GACCTCGCAGCACAACATTGCATCACCACATCATCAGCACCAGCAGGTCG--GCGGT-G- 4115
| ||||||||||||||||||| ||||||||||| | |||| |||||||| || | |
Sbjct 7303282 GTCCTCGCAGCACAACATTGCTTCACCACATCA--A-CACCGGCAGGTCGCTGCCATAGG 7303226
Query 4116 --TTGGTA-T--CG--GA-GGCG--G---C----AATGGCGGTGTCTCCCTCACCCTTGG 4158
|||| | | || | |||| | | ||||| || |||||||| || || ||
Sbjct 7303225 CATTGGCAGTGGCGTCGCCGGCGCTGGTACCGGCAATGGTGGAGTCTCCCTGACGCTGGG 7303166
Query 4159 TCTTCACCAGAACAACAGGGTCTGCATCGCCGAGCCTCTCCCGGCTGCTCTCCCGGCCAA 4218
||| ||||||||||| ||| ||||||| || || || || || ||||||||| ||||
Sbjct 7303165 TCTCCACCAGAACAATAGGATCTGCATGGCTGAACCACTACCAAATGCTCTCCCTCCCAA 7303106
Query 4219 CCTAGCTCACCGTTTCGGACTGGAGGAAGTCAGTGACGCCTATGTGATGAGCTCATTTGG 4278
|||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||
Sbjct 7303105 CCTAGCTCACCGTTTCGGGCTGGAGGATGTCAGCGACGCCTATGTGATGGGCTCATTTGC 7303046
Query 4279 AGGTCAGGACCGGCATTTCGGGAAGGAGATTGGTGGTCACTTGCTGCATGATTTTGTCGG 4338
||||| |||||||||||| || || |||||||||| |||||||| ||||||||||| ||
Sbjct 7303045 AGGTCCGGACCGGCATTTTGG-AA--AGATTGGTGGCCACTTGCTTCATGATTTTGTTGG 7302989
Query 4339 GTGATTGTGGCTGCTGCCTCAGGTTGCTGGTGAT--GCACTTGTAATGTACTGCTAGTAT 4396
||||| ||||||||||| || | | | | |||| |||| |||||||||||||||||
Sbjct 7302988 GTGATGGTGGCTGCTGCATCTGAT-GAAG-TGATATGCACCTGTAATGTACTGCTAGT-- 7302933
Query 4397 GATGTTAGGATGGTATATAA-GTCAATCACTTGGCGACATGGCTTGATGATCAGTCTGAA 4455
| |||||||||||||||||| |||||||||| ||| | |||||| |||||||| ||||
Sbjct 7302932 G-TGTTAGGATGGTATATAAAGTCAATCACTCGGCAGCTTGGCTT--TGATCAGTTTGAA 7302876
Query 4456 TCAATTTGTTCGGAGGGTGAAAAAACATTGATCTTCCCTTC 4496
||||||||| ||||||||||||| |||||| |||||||||
Sbjct 7302875 ACAATTTGTTTGGAGGGTGAAAAA-CATTGACCTTCCCTTC 7302836
Score = 435 bits (235), Expect = 6e-119
Identities = 584/747 (78%), Gaps = 46/747 (6%)
Strand=Plus/Minus
Query 1839 GTACAATGTAGAAAGCTTCTATTTTTGGAACCCTCTGTAAGGCAATTTTGTTTGCCTGTG 1898
||||| ||||| ||| || |||||| |||| || | ||| ||||||||||| | | |
Sbjct 7306036 GTACAGTGTAGTAAGGTTTTATTTTGGGAA---TCGCTCAGGAAATTTTGTTTGGCCGAG 7305980
Query 1899 TTCTTCAATAA-CATCTCTCTCCCATAATTGGGAGCTACGCTTGCTTTGTTCGTGTCATA 1957
|| | ||| ||||| ||||||||||||||||| || | |||||| | | |||| ||
Sbjct 7305979 TTAACTAGTAAGCATCTTTCTCCCATAATTGGGAGGTAGGATTGCTTCGGTTATGTCGTA 7305920
Query 1958 TCCACATGAAAACAAAAGCACACTGCTTCCTTTTCCTAAC-ATGGATAT-C-TTTTT--- 2011
||||| |||||||||||||| |||| ||| |||| ||||| ||| | | |||||
Sbjct 7305919 TCCACTTGAAAACAAAAGCATACTG-TTCTTTTTGCTAACTTTGGTGCTCCATTTTTAAG 7305861
Query 2012 -----ATC-TAATCATTCTTTGTTGGTAGATTATC-TCTCATCGAATTCTAACCCAACAG 2064
||| || | || ||| || || |||| | | || | |||||| || |||
Sbjct 7305860 AAGAAATCGAAAGCGTT-TTTATTCGTCTCCTATCTTGTTCTC-AGTTCTAA-CC--CAG 7305806
Query 2065 CAAT-ATCtttttttAGGTTTGCAAGAGGTACCGGCAGTACTACCAGCAGGTTCAGGCTG 2123
| ||| || |||||||||||||| ||||||||||| || |||||||| || ||||
Sbjct 7305805 TTTTAATCGCTTGCTAGGTTTGCAAGAGATACCGGCAGTATTATCAGCAGGTCCAAGCTG 7305746
Query 2124 TGATGGCCTCGTTCGAGACCGTCGCCGGGTTCAGCAACGCCGCGCCGTTCGCGGCATTGG 2183
||||||||||||| ||||| ||||| || |||||||| ||||| |||||| | || ||||
Sbjct 7305745 TGATGGCCTCGTTTGAGACAGTCGCGGGATTCAGCAATGCCGCCCCGTTCACTGCGTTGG 7305686
Query 2184 CGCTGAGGGCGATGGCGAAGCACTTCAAGTGCTTGAAGAGCATGATTCTGAACCAGCTGC 2243
| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct 7305685 CACTGAGGGCGATGGCGAAGCACTTCAAGTACTTGAAGGGCATGATACTGAACCAGCTGC 7305626
Query 2244 GCAACACGAGCAACAAG--GTC-GCTGTGAAGGACGGGCTAAACAAGGAGATCGCCGTGT 2300
|||||||||||| |||| | | | || ||||| | | || |||||| ||||| |||
Sbjct 7305625 GCAACACGAGCAGCAAGCAGCCAGGTGCCAAGGAAAG-C-AA-CAAGGACGTCGCCATGT 7305569
Query 2301 TCGGGCTCGCCGGGGGTAGCAGCGGCGGCGCCGGCCTCCAGCGAGCGAACAGCGCGAGCG 2360
| ||||| ||||| || ||||| | || | ||||||||||| ||||||||||||||
Sbjct 7305568 TTGGGCTTGCCGGTGG---CAGCG-C--CG--G-CCTCCAGCGAGGGAACAGCGCGAGCG 7305518
Query 2361 CGTTCGGCCAGCCGCACAATATTTGGCGCCCACAGAGGGGGCTCCCCGAGCGCGCTGTGT 2420
||||| ||||||||| ||| ||||||||||| |||||||| || ||||||||||| ||||
Sbjct 7305517 CGTTCAGCCAGCCGCCCAACATTTGGCGCCCCCAGAGGGGACTTCCCGAGCGCGCCGTGT 7305458
Query 2421 CCGTTTTACGCGCGTGGCTGTTCGAACACTTCCTGCACCCGTAAGCCCTTTGATCTTCTT 2480
| ||| | ||||||||||||||||||||||||||||| ||||||| || | | |
Sbjct 7305457 CTGTTCTCCGCGCGTGGCTGTTCGAACACTTCCTGCATCCGTAAG---TTGGCAATGCAC 7305401
Query 2481 ATTGCTTTATGGTTAACTCTGGGTTCATTAGCTGCACGCATTCCAAGACAATGATGATGA 2540
|||||| || | || || || ||||||||||||| | || ||| | ||||||||||
Sbjct 7305400 -TTGCTTG-TGAT-AA-TCCCGGATCATTAGCTGCACACCTTTCAATAAAATGATGATGG 7305345
Query 2541 TGCTACAGTTGCTTGCTTTAGATGAGG 2567
|||||||| | ||||||||||||||||
Sbjct 7305344 TGCTACAGGTTCTTGCTTTAGATGAGG 7305318
> Scaffold_13;HRSCAF=912
Length=95470783
Score = 1227 bits (664), Expect = 0.0
Identities = 1393/1718 (81%), Gaps = 157/1718 (9%)
Strand=Plus/Plus
Query 97 GCCTTTGCAGAAAGAAAGGCGCCACGAACCCAGCAACAACACCCAGCACAAAGGCGAAAC 156
||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct 86728638 GCCTTTGCAGAAAGAAAGGCGCCCCGAAACCAGCAACAACACCCAGCACAAAGGTGAAAG 86728697
Query 157 GGGGAAAAAGAGGA-GGAAAACAACAAG-AGGACGCGAGGGGTCGGGGT----G-GG--- 206
|||||||||| ||| |||||| |||||| ||| | | ||||||||||| | ||
Sbjct 86728698 GGGGAAAAAG-GGAGGGAAAAAAACAAGCTGGA-GAG-GGGGTCGGGGTGGGAGAGGCAA 86728754
Query 207 A-G-A--G-GGAGGCTACACTACAGCAG-CAGCAGAAGCAG-AGC-G-GGAGAGTGATGA 257
| | | | |||||||| ||||||||| |||||| ||||| || | || | | | ||
Sbjct 86728755 AGGAAGGGAGGAGGCTAGGCTACAGCAGTCAGCAGCAGCAGCCGCAGCGGCG-G-CA-GA 86728811
Query 258 G-GGAGTGAGACCAGGCCAGCCAAG-C--CAGGCCCGGGCGCTCGGAAAGTGCGGAGCCG 313
| ||| ||||||||||||||| || | ||||||| |||||||| ||||||||||||||
Sbjct 86728812 GAGGA-AGAGACCAGGCCAGCCGAGCCAGCAGGCCC-GGCGCTCGCAAAGTGCGGAGCCG 86728869
Query 314 TTTCCCCTCTATCTCCACTCTCTCCAGGGCCAGGTGCTCACTGCGCTGCGCCTCTTCGCA 373
||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct 86728870 TTTCCTCTCTATCTCCACTCTCTCCAGGGCCAGGTTCTCACTGCGCTGCG-CGCTTCGC- 86728927
Query 374 CGCACCACCCGTACTACGTGCCCACCCGCGCGCGCGCCGAGGAGAAGAGACCCACGACCG 433
| | ||||||| ||||| ||||||| | || | | ||| | | ||
Sbjct 86728928 C-C-CCACCCG---TACGT--------GCGCGCGTG-CG-TGCG-CGAG----A-G--CG 86728964
Query 434 TACGTGCGTGCGCGCCATGTCGTCCGCCGCTGGGGGC-GGCGGGTACGGCGGCGGCCAGG 492
| | || | ||||||||||||||||| ||| || || ||||||||||| |||| |
Sbjct 86728965 ---G-G-GT--GAGCCATGTCGTCCGCCGC-GGGTGCTGGTGGGTACGGCGG-GGCC--G 86729013
Query 493 GTGGAGGCGCGGAGcaccaccaccaccaccacGGGCACGCCGGTCACCTCCTGCTCCACC 552
|| ||||||||| || || | ||||||||| ||||| ||||||||||| || |
Sbjct 86729014 GT---GGCGCGGAG------CATCAGCGCCACGGGCATGCCGGCCACCTCCTGCTTCAGC 86729064
Query 553 ACCATCCGCAGCACGTggccggcgcggccgttgcggcagcggccgcggcggcgggcgggc 612
||||| | || || | | || || | | | || || ||||||||||| ||||
Sbjct 86729065 ACCAT-C-CA-CA--T---C-ACGTGG-C--T---G--GC-GCTGCGGCGGCGGGTGGGC 86729106
Query 613 AGATGTACCACGTGCCCCAGCACAGCCGGCGCGAGAAGCTCCGGTTCCCGCCGGACGCCG 672
|||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 86729107 AGATGTACCACGTGCCGCAGCATAGCCGGCGCGAGAAGCTCCGGTTCCCGCCCGACGCCG 86729166
Query 673 GGGACTCGCCACCGCCTCATGGTCATGGTCATGGTCATGCCCCgcagcagcagcagcagc 732
|||| || ||||||||||||||||| ||| |||| | | | || |||||| ||||
Sbjct 86729167 CGGACGCGTCACCGCCTCATGGTCAT-GTCCCGGTC--CCGCAGGAGGAGCAGCCTCAGC 86729223
Query 733 aCGGGTCGTGGCCTCCGCCCCCGGCGTTCTACTCGTACGCGTCCTCGTCGTCGTCGTACT 792
||||| |||||||||||| ||||| ||||||||||| |||||||| || ||||||||||
Sbjct 86729224 ACGGGATGTGGCCTCCGCCGCCGGCCTTCTACTCGTATGCGTCCTCCTCCTCGTCGTACT 86729283
Query 793 CCCCGCACAGCCCTACTCTAGCGCAGGCGCAGCTGGTGGCGCACGGGCTGGCGCCGCCGC 852
| ||||||||||| || || | |||||||||||| |||||||||| |||||||||||||
Sbjct 86729284 CTCCGCACAGCCCAACGCTTGTCCAGGCGCAGCTGATGGCGCACGGTCTGGCGCCGCCGC 86729343
Query 853 TCCCGCAGATCCCGACGCAGAACTTCTCGCTGTCGCTCTCCTCCGCGTCGTCGAATCCTC 912
||||||||||||||||||| |||||||||||| | || || ||||||||||||||
Sbjct 86729344 TCCCGCAGATCCCGACGCACAACTTCTCGCTGACCCTGTCATCCGCGTCGTCGAA----- 86729398
Query 913 CACCACCGCAGGCGCAGCCGAGGAGGCAGCTCGGCGGCCTCGCGCAGGCCACGGGGCCGT 972
| || || | ||||||||||||||||| | |||||| ||||||||||||||||||||
Sbjct 86729399 C-CCTCCTC---CGCAGCCGAGGAGGCAGTTGAGCGGCCCCGCGCAGGCCACGGGGCCGT 86729454
Query 973 TCGGTCCCTTCACCGGCTACGCCGCCGTGCTCGGCCGGTCCCGTTTCCTCGGCCCGGCAG 1032
|||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||| | |
Sbjct 86729455 TCGGGCCCTTCACTGGCTATGCCGCCGTGCTTGGCCGGTCCCGTTTCCTCGGCCCGACGG 86729514
Query 1033 AGAAGCTGTTCGAGGAGATCTGCGACGTCGGCGGCGCTGCTTCGCACGTCGACCGCACCA 1092
||||||| |||||||||||||||||||||||||||||||| |||||||||| || |||
Sbjct 86729515 AGAAGCTTTTCGAGGAGATCTGCGACGTCGGCGGCGCTGCAGCGCACGTCGAGCGTACCT 86729574
Query 1093 TCTCCGACGAGGGCCTGCTCGACGCGGATCCGATGGACGGCGTCGATCATGACGTCGTTG 1152
|||||||||| | ||| ||||| || |||||||||||||||| | | | || | || |
Sbjct 86729575 TCTCCGACGATGCCCTTCTCGAAGCAGATCCGATGGACGGCG-C--TGA-CAC-T-GTCG 86729628
Query 1153 ATCACGACCTCGGCGGCGCTGACCGCGCAGCGGCCGACGCTGGCCCCATCTCGGGGGCCG 1212
|||| || | | || | |||||||| ||||| ||||||||||||||||| || || |
Sbjct 86729629 ATCATGA-AT--TC-GC-C-GACCGCGCCGCGGCAGACGCTGGCCCCATCTCTGGCGCAG 86729682
Query 1213 AGCAGCAGTGGAAGAAGACGAAGCTCATCTCCATGATGGAAGAGGTGA---GTGAGCTCC 1269
| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct 86729683 AACAGCAGTGGAAGAAGACGAGGCTCATCTCCATGATGGAAGAGGTGAGTGGTGAGCT-C 86729741
Query 1270 GCTAGCCGCCTC-A---ATTCCTCCTTCCAGGTTTCTTGTGGCGACCATCTTTTTCACCT 1325
||||| |||||| | ||||| |||||||||||||||||||| |||||||||||||||
Sbjct 86729742 GCTAGGCGCCTCAATTCATTCCCCCTTCCAGGTTTCTTGTGGCATCCATCTTTTTCACCT 86729801
Query 1326 TGTTTCGGCGTTACAATTATCGCTACTCCTGGGTGGAGAAGAATCTTGCACATAGTGGTC 1385
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 86729802 TGTTTCGGCGTTACAATTATCGCTCGTCCTGGGTGGAGAAGAATCTTGCCCATAGTGGTC 86729861
Query 1386 ATGTCACCGATGCAGTTGCGGATTGCTTTTATTTACTGTGGTTGCATGTGCTTTTGATTT 1445
| |||| ||| ||||||| || |||||||| |||||||| ||||||||||||||||||||
Sbjct 86729862 ACGTCATCGACGCAGTTGTGGCTTGCTTTTGTTTACTGTTGTTGCATGTGCTTTTGATTT 86729921
Query 1446 GATGATGATTTCCTTTGCTGCTGATACATCTTTTGATTTGTTCTCTCTCTTCTTTTTCCT 1505
||||||||||||||||| | | | | |||||||||||||||| | | | | ||||| |
Sbjct 86729922 GATGATGATTTCCTTTGGTCCAGTTCCATCTTTTGATTTGTT-T-T-T-T-CTTTTG--T 86729974
Query 1506 CGAGTGGTTTGAGCTTGTACAGTTCTGCACTGTTCATGATGAATAGTAGTGTTCCTCCGC 1565
| | ||||||||| ||| || |||||||||||||| ||| | | ||||| | ||
Sbjct 86729975 -G--T--TTTGAGCTT--ACATTTTTGCACTGTTCATGACGAACATTGTTGTTCTTTCGT 86730027
Query 1566 GTCTTATCACCAAAGATTGTATTTT-GATCGGCTGTTTAGCACTA---CTGTGAGTGCTT 1621
|||||||||| ||||| ||||||| |||| |||||| || ||| ||||| || |||
Sbjct 86730028 GTCTTATCACGAAAGACCGTATTTTTGATCAGCTGTTCAGTACTGTGGCTGTGGGTACTT 86730087
Query 1622 GAAAAGATAGTCCTCCA------CATGAAATT--AGAACTAACCG-TCCTTTCAAAGTCT 1672
|||||||||| || | ||||||||| |||||||| || |||||||||| |||
Sbjct 86730088 CAAAAGATAGTAATCTAGGAGTACATGAAATTTTAGAACTAAACGGTCCTTTCAAAATCT 86730147
Query 1673 TGAGACATGACCCATGGGCGATGCCAGATGCCATTAATTCTCTCTTGTTGGTGTCCTCTG 1732
| |||||||| |||| ||| |||||||||||||||||||||| || | |||| ||||
Sbjct 86730148 GGGGACATGACTAATGGACGACGCCAGATGCCATTAATTCTCTCCTG--G-TGTCATCTG 86730204
Query 1733 GTGAGAATAGTGGCGCTGCTAAAAGCTTCGAGCTTTGA 1770
|| ||||||| |||| ||||| |||| |||||||||
Sbjct 86730205 ACGAAAATAGTGACGCTTCTAAATGCTTTGAGCTTTGA 86730242
Score = 741 bits (401), Expect = 0.0
Identities = 774/950 (81%), Gaps = 42/950 (4%)
Strand=Plus/Plus
Query 3570 TTCCAATCGTGCAGGTATCCTACCGATGGTGATAAGCAAATGCTAGCAAAACAAACAGGC 3629
|||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct 86731951 TTCCAATC-TGCAGGTATCCATCTGATGGTGATAAGCAAATGCTAGCTAAACAAACAGGT 86732009
Query 3630 TTGACACGCAACCAGGTA--AATAGAAATGC-TTCTAGGTGTGT-TCAAGAATAGATTGC 3685
|| ||||| || |||||| | | ||| || |||| ||| | || || | |||
Sbjct 86732010 TTAACACGGAATCAGGTACGGAAA-AAAGGCTTTCT-TTTGTATATC-AGGCTGCATTCT 86732066
Query 3686 ACAGTATATCAGGCTAGATTGTTTTGTTTTCAGGACATTTTGATTGAATTTGTGATGCTG 3745
|| | ||| | || | ||| |||| | ||| || |||||| | |||||||||
Sbjct 86732067 CCA-TCCATC-TTCCAG-TGATTTCTTTTTGA-GACGTTCTGATTGGTGTGGTGATGCTG 86732122
Query 3746 GTGCAGGTATCGAACTGGTTTATCAACGCAAGGGTTAGGTTGTGGAAGCCAATGGTGGAA 3805
|||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct 86732123 TTGCAGGTATCAAACTGGTTCATCAACGCCAGGGTTAGACTGTGGAAGCCAATGGTGGAA 86732182
Query 3806 GAAATTCACAACCTAGAGATGAGGCAAATGCACAAGCACTCGGTGGTTGACAAGGGCCAG 3865
|| || |||||||| |||||| |||| ||||| |||||||||||| | |||||||| |||
Sbjct 86732183 GAGATCCACAACCTCGAGATGCGGCAGATGCATAAGCACTCGGTGCTCGACAAGGGTCAG 86732242
Query 3866 CATAGCGTGCATCATCAGGCCCAGCATTCTTCGCAGTGCAGCGGGAATCCCTCCGTTCCT 3925
||| || ||||||||||||||||||||| || ||||| ||||||| ||||| | ||||
Sbjct 86732243 CATGGCACGCATCATCAGGCCCAGCATTCGTCCCAGTGTGGCGGGAAGCCCTCTGATCCT 86732302
Query 3926 TCGGACTCCCATCCTGGACAGAGCAGCAGCATAACTCGGAACCACAACACCGCTGCCTCC 3985
|| ||||| ||||||||||||||||||||||| ||||| |||||||||| |||||| ||
Sbjct 86732303 TCCGACTCGCATCCTGGACAGAGCAGCAGCATCACTCGCAACCACAACAACGCTGCTTCT 86732362
Query 3986 CAGGGCTTCCCGGATGAGCTCTCCCAGATGTCCCAGTCCATCCAGG-G-A--CAG-G-TG 4039
|| ||||||||||||||||||||||||||||||||||||||||||| | | | | | ||
Sbjct 86732363 CACGGCTTCCCGGATGAGCTCTCCCAGATGTCCCAGTCCATCCAGGAGCAGGCGGCGGTG 86732422
Query 4040 AGCTTCGCATACAACGGGCTGACCTCGCAGCACAACATTGCATCACCACATCATCAGCAC 4099
| |||||| |||||||| | |||||| ||||||| ||||||| || || || || |||
Sbjct 86732423 AACTTCGCTTACAACGGTTTCTCCTCGCTGCACAACGTTGCATCGCCGCACCAACAACAC 86732482
Query 4100 CAGCAG--G-TCGGCGGTGTTGGTATCGGAGGCGGCAATGGCGGTGTCTCCCTCACCCTT 4156
|||||| | ||| ||||| || | | | |||||| ||||| ||||| ||||||||
Sbjct 86732483 CAGCAGCAGGTCGCCGGTGGCGGCAACA-A--CGGCAACGGCGGGGTCTCTCTCACCCTC 86732539
Query 4157 GGTCTTCACCAGAACAACAGGGTCTGCATCGCCGAGCCTCTCCCG--GC-TGCTCTCCCG 4213
||||| |||||||||||||||||||||||| ||||||| |||||| || ||| ||||||
Sbjct 86732540 GGTCTCCACCAGAACAACAGGGTCTGCATCACCGAGCCGCTCCCGACGCATGCCCTCCCG 86732599
Query 4214 GCCAACCTAGCTCACCGTTTCGGACTGGAGGAAGTCAGTGACGCCTATGTGATGAGCTCA 4273
|||||||||||||||| ||||| |||||||| ||||| |||||||| |||||| ||||
Sbjct 86732600 CCCAACCTAGCTCACCGCTTCGGGCTGGAGGATGTCAGCGACGCCTACGTGATGGGCTCG 86732659
Query 4274 TTTGGAGGTCAGGACCGGCATTTCGGGAAGGAGATTGGTGGTCACTTGCTGCATGATTTT 4333
|| ||||||||||| ||||||| || |||||||| ||||||||||| ||||||||||||
Sbjct 86732660 TTCGGAGGTCAGGAGAGGCATTTTGGAAAGGAGATCGGTGGTCACTTCCTGCATGATTTT 86732719
Query 4334 GTCGGGTGATT--G-TGGCTGCTGC--C-TCAGGTTGCTGGTGATGCACTTGTAATGTAC 4387
|| || ||| | |||||||||| | | | | | |||| |||| |||| | |||
Sbjct 86732720 GTTGGCTGACGACGGTGGCTGCTGCTGCCTGATATATCAAGTGACGCACCTGTATTTTAC 86732779
Query 4388 TGCTAGTATGATGTTAGGATGGTATATAA-GTCAATCACTTGGCGACATGGCTTGATGAT 4446
| |||||||| | | |||||||||||||| ||||| ||||||||| | |||||||||
Sbjct 86732780 TCCTAGTATG-T-T-AGGATGGTATATAAAGTCAAACACTTGGCGGCTTGGCTTGAT--- 86732833
Query 4447 CAGTCTGAATCAATTTGT-TCGGAGGGTGAAAAAA-CATTGATCTTCCCT 4494
|||| ||||||||||||| | |||||||||||||| ||||||||||||||
Sbjct 86732834 CAGTTTGAATCAATTTGTGTTGGAGGGTGAAAAAAACATTGATCTTCCCT 86732883
Score = 420 bits (227), Expect = 2e-114
Identities = 340/395 (86%), Gaps = 6/395 (2%)
Strand=Plus/Plus
Query 2077 ttAGGTTTGCAAGAGGTACCGGCAGTACTACCAGCAGGTTCAGGCTGTGATGGCCTCGTT 2136
||||||||||||||| |||||||||||||| |||||||| || |||||||||||||||||
Sbjct 86730519 TTAGGTTTGCAAGAGATACCGGCAGTACTATCAGCAGGTCCAAGCTGTGATGGCCTCGTT 86730578
Query 2137 CGAGACCGTCGCCGGGTTCAGCAACGCCGCGCCGTTCGCGGCATTGGCGCTGAGGGCGAT 2196
||||| ||||| || |||||||| ||||| |||||||| || ||||| |||||||||||
Sbjct 86730579 TGAGACTGTCGCGGGATTCAGCAATGCCGCCCCGTTCGCTGCGTTGGCACTGAGGGCGAT 86730638
Query 2197 GGCGAAGCACTTCAAGTGCTTGAAGAGCATGATTCTGAACCAGCTGCGCAACACGAGCAA 2256
||| |||||||||||||||||||||| |||||| || |||||||||||||| ||||||||
Sbjct 86730639 GGCCAAGCACTTCAAGTGCTTGAAGAACATGATACTTAACCAGCTGCGCAATACGAGCAA 86730698
Query 2257 CAAGGTCGCTGTGAAGGACGGGCT-A--AACAAGGAGATCGCCGTGTTCGGGCTCGCCGG 2313
||||| |||| |||||||| || | |||||||| |||| ||||| ||||| |||||
Sbjct 86730699 CAAGGCTGCTGCCAAGGACGGCCTAAGCAACAAGGATGTCGCTGTGTTTGGGCTTGCCGG 86730758
Query 2314 GGGTA--G-CAGCGGCGGCGCCGGCCTCCAGCGAGCGAACAGCGCGAGCGCGTTCGGCCA 2370
|| | | | ||| |||||||||||||||||||| ||||| || |||||||| | ||
Sbjct 86730759 CGGCAGCGTCGGCGCCGGCGCCGGCCTCCAGCGAGGGAACAATGCCAGCGCGTTTGTTCA 86730818
Query 2371 GCCGCACAATATTTGGCGCCCACAGAGGGGGCTCCCCGAGCGCGCTGTGTCCGTTTTACG 2430
||| ||||| ||||||||||| ||||||||||| |||||||| || ||||| ||| | ||
Sbjct 86730819 GCCCCACAACATTTGGCGCCCTCAGAGGGGGCTTCCCGAGCGTGCCGTGTCTGTTCTCCG 86730878
Query 2431 CGCGTGGCTGTTCGAACACTTCCTGCACCCGTAAG 2465
||||||||||||||||||||||||||| |||||||
Sbjct 86730879 CGCGTGGCTGTTCGAACACTTCCTGCATCCGTAAG 86730913
> Scaffold_70;HRSCAF=1591
Length=111429323
Score = 316 bits (171), Expect = 2e-83
Identities = 469/611 (77%), Gaps = 27/611 (4%)
Strand=Plus/Plus
Query 3748 GCAGGTATCGAACTGGTTTATCAACGCAAGGGTTAGGTTGTGGAAGCCAATGGTGGAAGA 3807
||||||||| |||||||| ||||| ||||||||||| | ||||||||||||||||||||
Sbjct 50113060 GCAGGTATCCAACTGGTTCATCAATGCAAGGGTTAGACTCTGGAAGCCAATGGTGGAAGA 50113119
Query 3808 AATTCACAACCTAGAGATGAGGCAAATGCACAAGCACTCGGTGG-TTGACAAGGGCCAGC 3866
||||||||| || ||||||| ||| |||| ||| | || | |||||||| |||||
Sbjct 50113120 AATTCACAATCTTGAGATGAAGCAGCTGCAGAAGAA-TCCTTCTCTTGACAAGAACCAGC 50113178
Query 3867 ATAGCGTGCATCATCAGGCCCAGCATTCTTC-G-CAGTGCAGCGGGAATCCCTCCGTTCC 3924
| |||| || || | || ||||| || | ||| ||||||||| ||||| | |||
Sbjct 50113179 TCCCCATGCAGCA-CA--CTCAACATTCGTCTGACAG--CAGCGGGAAGCCCTCTGATCC 50113233
Query 3925 TTCGGACTCCCATCCTGGACAGAGCAGCAGCATAACTCGGAACCACAACACCGCTGCCTC 3984
|| |||||| | || || | |||||||| ||| ||||||||| | | |||| |
Sbjct 50113234 ATCAAACTCCCTGCAAGGGCAAGGTAGCAGCATGACTAGGAACCACAGCGTCAATGCCAC 50113293
Query 3985 CCAGGGCTTCCCGGATGAGCTCTCCCAGATGTCCCAGTCCATC-CAGGGACAGGTGAGCT 4043
|| | || |||| ||||||||||||| |||| |||| |||| |||||||||||
Sbjct 50113294 CCGTCACATCGAAGATGGGCTCTCCCAGATGCCCCATGACATCTCAGG-ACAGGTGAGCT 50113352
Query 4044 TCGCATACAACGGGCTGACCTCGCAGCACAACATTGCATCACCACATCATCAGCACCAGC 4103
| || ||||||||||| |||||||| |||| |||||||| | || | ||||| || |
Sbjct 50113353 TTGCTTACAACGGGCTCACCTCGCATCACAGCATTGCATTGTCTCACCCCCAGCAGCAAC 50113412
Query 4104 AGG---TC---GGCGGTGTTGGTATCGGAGGCGGCAAT-G--GC-GGTGTCTCCCTCACC 4153
| | || |||| | |||| || | | |||| | || |||||||| ||||||
Sbjct 50113413 ACGACCTCATTGGCGCCGGTGGT---GGTG-CTGCAAACGCCGCTGGTGTCTCACTCACC 50113468
Query 4154 CTTGGTCTTCACCAGAACAACAGGGTCTGCATCGCCGAGCCTCTCCCGGCTGCTCT-CCC 4212
||||| ||||||||||||||| ||| | ||| || ||||| || || || || || |||
Sbjct 50113469 CTTGGCCTTCACCAGAACAACCGGGCTTACATTGCTGAGCCCCTGCCAGCCGCCCTTCCC 50113528
Query 4213 GGCCAACCTAGCTCACCGTTTCGGACTGGAGGAAGTCAGTGACGCCTATGTGATGAGCTC 4272
||||| || ||||| |||||||||||||| |||||||| ||||||||||| ||||
Sbjct 50113529 CTG-AACCTCGCCCACCGGTTCGGACTGGAGGATGTCAGTGATCCCTATGTGATGGGCTC 50113587
Query 4273 ATTTGGAGGTCAGGACCGGCATTTCGGGAAGGAGATTGGTGGTCACTTGCTGCATGATTT 4332
||||||||| |||||||||||||||| |||||||| |||||||| ||||| ||||| ||
Sbjct 50113588 ATTTGGAGGCCAGGACCGGCATTTCGCCAAGGAGATCGGTGGTCATTTGCTCCATGACTT 50113647
Query 4333 TGTCGGGTGAT 4343
||| |||||||
Sbjct 50113648 TGTAGGGTGAT 50113658
Score = 316 bits (171), Expect = 2e-83
Identities = 469/611 (77%), Gaps = 27/611 (4%)
Strand=Plus/Plus
Query 3748 GCAGGTATCGAACTGGTTTATCAACGCAAGGGTTAGGTTGTGGAAGCCAATGGTGGAAGA 3807
||||||||| |||||||| ||||| ||||||||||| | ||||||||||||||||||||
Sbjct 50313873 GCAGGTATCCAACTGGTTCATCAATGCAAGGGTTAGACTCTGGAAGCCAATGGTGGAAGA 50313932
Query 3808 AATTCACAACCTAGAGATGAGGCAAATGCACAAGCACTCGGTGG-TTGACAAGGGCCAGC 3866
||||||||| || ||||||| ||| |||| ||| | || | |||||||| |||||
Sbjct 50313933 AATTCACAATCTTGAGATGAAGCAGCTGCAGAAGAA-TCCTTCTCTTGACAAGAACCAGC 50313991
Query 3867 ATAGCGTGCATCATCAGGCCCAGCATTCTTC-G-CAGTGCAGCGGGAATCCCTCCGTTCC 3924
| |||| || || | || ||||| || | ||| ||||||||| ||||| | |||
Sbjct 50313992 TCCCCATGCAGCA-CA--CTCAACATTCGTCTGACAG--CAGCGGGAAGCCCTCTGATCC 50314046
Query 3925 TTCGGACTCCCATCCTGGACAGAGCAGCAGCATAACTCGGAACCACAACACCGCTGCCTC 3984
|| |||||| | || || | |||||||| ||| ||||||||| | | |||| |
Sbjct 50314047 ATCAAACTCCCTGCAAGGGCAAGGTAGCAGCATGACTAGGAACCACAGCGTCAATGCCAC 50314106
Query 3985 CCAGGGCTTCCCGGATGAGCTCTCCCAGATGTCCCAGTCCATC-CAGGGACAGGTGAGCT 4043
|| | || |||| ||||||||||||| |||| |||| |||| |||||||||||
Sbjct 50314107 CCGTCACATCGAAGATGGGCTCTCCCAGATGCCCCATGACATCTCAGG-ACAGGTGAGCT 50314165
Query 4044 TCGCATACAACGGGCTGACCTCGCAGCACAACATTGCATCACCACATCATCAGCACCAGC 4103
| || ||||||||||| |||||||| |||| |||||||| | || | ||||| || |
Sbjct 50314166 TTGCTTACAACGGGCTCACCTCGCATCACAGCATTGCATTGTCTCACCCCCAGCAGCAAC 50314225
Query 4104 AGG---TC---GGCGGTGTTGGTATCGGAGGCGGCAAT-G--GC-GGTGTCTCCCTCACC 4153
| | || |||| | |||| || | | |||| | || |||||||| ||||||
Sbjct 50314226 ACGACCTCATTGGCGCCGGTGGT---GGTG-CTGCAAACGCCGCTGGTGTCTCACTCACC 50314281
Query 4154 CTTGGTCTTCACCAGAACAACAGGGTCTGCATCGCCGAGCCTCTCCCGGCTGCTCT-CCC 4212
||||| ||||||||||||||| ||| | ||| || ||||| || || || || || |||
Sbjct 50314282 CTTGGCCTTCACCAGAACAACCGGGCTTACATTGCTGAGCCCCTGCCAGCCGCCCTTCCC 50314341
Query 4213 GGCCAACCTAGCTCACCGTTTCGGACTGGAGGAAGTCAGTGACGCCTATGTGATGAGCTC 4272
||||| || ||||| |||||||||||||| |||||||| ||||||||||| ||||
Sbjct 50314342 CTG-AACCTCGCCCACCGGTTCGGACTGGAGGATGTCAGTGATCCCTATGTGATGGGCTC 50314400
Query 4273 ATTTGGAGGTCAGGACCGGCATTTCGGGAAGGAGATTGGTGGTCACTTGCTGCATGATTT 4332
||||||||| |||||||||||||||| |||||||| |||||||| ||||| ||||| ||
Sbjct 50314401 ATTTGGAGGCCAGGACCGGCATTTCGCCAAGGAGATCGGTGGTCATTTGCTCCATGACTT 50314460
Query 4333 TGTCGGGTGAT 4343
||| |||||||
Sbjct 50314461 TGTAGGGTGAT 50314471
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 5754051032135
Database: zizania_palustris_13Nov2018_okGsv.fasta
Posted date: Jul 9, 2019 4:10 PM
Number of letters in database: 1,288,768,912
Number of sequences in database: 2,183
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5