With the "--repo" option, paru does synchronization operations twice

[refola]

Affected Version

I first encountered this a while ago (possibly when I first used paru), but didn't take note at the time.

paru -V
paru v2.0.4 - libalpm v15.0.0

Description

Running a paru sync operation with --repo performs the sync operation twice. I expect that, e.g., paru --repo -Sy should only sync the mirrors once.

Have you checked previous issues?
I searched for any issue with "--repo" in it, but GitHub's search ate the -- and the 15 pages of results seemed to all be generic references to some "repo" or another. I did Ctrl+F search each page of results for --repo, and it's not in any of the titles.

Output

Include the FULL output of any relevant commands/configs
I'm scripting it a bit to show how it's the same with --repo before and after the pacman operation, and applies the same to -Sy, -Syu, and -Syuw.

Don't cut parts of the input always include the FULL thing

> PS1='> '; sudo -v; for op in '-Sy' '-Syu' '-Syuw'; do for ops in "$op --repo" "--repo $op"; do cmd="paru $ops"; echo; echo "$PS1$cmd"; $cmd; done; done

> paru -Sy --repo
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date

> paru --repo -Sy
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date

> paru -Syu --repo
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Starting full system upgrade...
 there is nothing to do
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Starting full system upgrade...
 there is nothing to do

> paru --repo -Syu
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Starting full system upgrade...
 there is nothing to do
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Starting full system upgrade...
 there is nothing to do

> paru -Syuw --repo
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Starting full system upgrade...
 there is nothing to do
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Starting full system upgrade...
 there is nothing to do

> paru --repo -Syuw
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Starting full system upgrade...
 there is nothing to do
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
:: Starting full system upgrade...
 there is nothing to do

paru.conf and pacman.conf are usually always relevant
I don't think i changed them, but here they are (copied with names edited to comply with GitHub's file extension filter).
pacman.conf.txt
paru.conf.txt

[Morganamilo]

I don't see the same thing on my end. Mind posting the output with PARU_DEBUG=1?

[refola]

ralju@xavsam:~$ PARU_DEBUG=1 paru --repo -Sy
debug: <paru> Config {
    section: Some(
        "options",
    ),
    args: Args {
        bin: "pacman",
        op: "sync",
        args: [
            Arg {
                key: "y",
                value: None,
            },
        ],
        targets: [],
    },
    globals: Args {
        bin: "pacman",
        op: "sync",
        args: [],
        targets: [],
    },
    cols: Some(
        212,
    ),
    op: Sync,
    raur: Handle {
        client: Client {
            accepts: Accepts {
                gzip: true,
            },
            proxies: [
                Proxy(
                    System(
                        {},
                    ),
                    None,
                ),
            ],
            referer: true,
            default_headers: {
                "accept": "*/*",
                "user-agent": "paru/2.0.4",
            },
        },
        url: "https://aur.archlinux.org/rpc",
    },
    fetch: Fetch {
        clone_dir: "/home/ralju/.cache/paru/clone",
        diff_dir: "/home/ralju/.cache/paru/diff",
        git: "git",
        git_flags: [],
        aur_url: Url {
            scheme: "https",
            cannot_be_a_base: false,
            username: "",
            password: None,
            host: Some(
                Domain(
                    "aur.archlinux.org",
                ),
            ),
            port: None,
            path: "/",
            query: None,
            fragment: None,
        },
    },
    cache: {},
    need_root: true,
    pacman: Config {
        root_dir: "/",
        db_path: "/var/lib/pacman/",
        cache_dir: [
            "/var/cache/pacman/pkg/",
        ],
        hook_dir: [
            "/etc/pacman.d/hooks/",
        ],
        gpg_dir: "/etc/pacman.d/gnupg/",
        log_file: "/var/log/pacman.log",
        hold_pkg: [
            "pacman",
            "glibc",
            "manjaro-system",
        ],
        ignore_pkg: [],
        ignore_group: [],
        architecture: [
            "x86_64",
        ],
        xfer_command: "",
        no_upgrade: [],
        no_extract: [],
        clean_method: [
            "KeepInstalled",
        ],
        sig_level: [
            "PackageRequired",
            "PackageTrustedOnly",
            "DatabaseOptional",
            "DatabaseTrustedOnly",
        ],
        local_file_sig_level: [
            "PackageOptional",
            "PackageTrustedOnly",
        ],
        remote_file_sig_level: [],
        download_user: None,
        use_syslog: false,
        color: false,
        use_delta: 0.0,
        total_download: false,
        check_space: true,
        verbose_pkg_lists: false,
        disable_download_timeout: false,
        parallel_downloads: 1,
        disable_sandbox: false,
        chomp: false,
        repos: [
            Repository {
                name: "core",
                servers: [
                    "https://ridgewireless.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://irltoolkit.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://opencolo.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://codingflyboy.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://nocix.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://mnvoip.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://coresite.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://volico.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://forksystems.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://repo.ialab.dsu.edu/manjaro/stable/core/x86_64",
                    "https://ohioix.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://southfront.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://uvermont.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://nnenix.mm.fcix.net/manjaro/stable/core/x86_64",
                    "https://mirror.math.princeton.edu/pub/manjaro/stable/core/x86_64",
                    "https://ask4.mm.fcix.net/manjaro/stable/core/x86_64",
                ],
                sig_level: [
                    "PackageRequired",
                    "PackageTrustedOnly",
                    "DatabaseOptional",
                    "DatabaseTrustedOnly",
                ],
                usage: [
                    "All",
                ],
            },
            Repository {
                name: "extra",
                servers: [
                    "https://ridgewireless.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://irltoolkit.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://opencolo.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://codingflyboy.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://nocix.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://mnvoip.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://coresite.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://volico.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://forksystems.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://repo.ialab.dsu.edu/manjaro/stable/extra/x86_64",
                    "https://ohioix.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://southfront.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://uvermont.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://nnenix.mm.fcix.net/manjaro/stable/extra/x86_64",
                    "https://mirror.math.princeton.edu/pub/manjaro/stable/extra/x86_64",
                    "https://ask4.mm.fcix.net/manjaro/stable/extra/x86_64",
                ],
                sig_level: [
                    "PackageRequired",
                    "PackageTrustedOnly",
                    "DatabaseOptional",
                    "DatabaseTrustedOnly",
                ],
                usage: [
                    "All",
                ],
            },
            Repository {
                name: "community",
                servers: [
                    "https://ridgewireless.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://irltoolkit.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://opencolo.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://codingflyboy.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://nocix.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://mnvoip.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://coresite.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://volico.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://forksystems.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://repo.ialab.dsu.edu/manjaro/stable/community/x86_64",
                    "https://ohioix.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://southfront.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://uvermont.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://nnenix.mm.fcix.net/manjaro/stable/community/x86_64",
                    "https://mirror.math.princeton.edu/pub/manjaro/stable/community/x86_64",
                    "https://ask4.mm.fcix.net/manjaro/stable/community/x86_64",
                ],
                sig_level: [
                    "PackageRequired",
                    "PackageTrustedOnly",
                    "DatabaseOptional",
                    "DatabaseTrustedOnly",
                ],
                usage: [
                    "All",
                ],
            },
            Repository {
                name: "multilib",
                servers: [
                    "https://ridgewireless.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://irltoolkit.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://opencolo.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://codingflyboy.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://nocix.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://mnvoip.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://coresite.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://volico.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://forksystems.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://repo.ialab.dsu.edu/manjaro/stable/multilib/x86_64",
                    "https://ohioix.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://southfront.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://uvermont.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://nnenix.mm.fcix.net/manjaro/stable/multilib/x86_64",
                    "https://mirror.math.princeton.edu/pub/manjaro/stable/multilib/x86_64",
                    "https://ask4.mm.fcix.net/manjaro/stable/multilib/x86_64",
                ],
                sig_level: [
                    "PackageRequired",
                    "PackageTrustedOnly",
                    "DatabaseOptional",
                    "DatabaseTrustedOnly",
                ],
                usage: [
                    "All",
                ],
            },
        ],
    },
    alpm: Alpm {
        alpm: Some(
            Alpm,
        ),
    },
    color: Colors {
        enabled: false,
        field: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        error: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        warning: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        bold: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        upgrade: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        base: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        action: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        sl_repo: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        sl_pkg: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        sl_version: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        sl_installed: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        ss_repo: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        ss_name: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        ss_ver: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        ss_stats: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        ss_orphaned: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        ss_installed: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        ss_ood: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        code: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        news_date: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        old_version: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        new_version: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        install_version: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        number_menu: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        group: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        stats_line_separator: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
        stats_value: Style {
            foreground: None,
            background: None,
            blink: false,
            bold: false,
            dimmed: false,
            hidden: false,
            italic: false,
            reverse: false,
            strikethrough: false,
            underline: false,
        },
    },
    targets: [],
    aur_url: Url {
        scheme: "https",
        cannot_be_a_base: false,
        username: "",
        password: None,
        host: Some(
            Domain(
                "aur.archlinux.org",
            ),
        ),
        port: None,
        path: "/",
        query: None,
        fragment: None,
    },
    aur_rpc_url: None,
    arch_url: Url {
        scheme: "https",
        cannot_be_a_base: false,
        username: "",
        password: None,
        host: Some(
            Domain(
                "archlinux.org",
            ),
        ),
        port: None,
        path: "/",
        query: None,
        fragment: None,
    },
    build_dir: "/home/ralju/.cache/paru/clone",
    cache_dir: "/home/ralju/.cache/paru",
    state_dir: "/home/ralju/.local/state/paru",
    devel_path: "/home/ralju/.local/state/paru/devel.toml",
    config_path: Some(
        "/etc/paru.conf",
    ),
    news: 0,
    stats: false,
    order: false,
    gendb: false,
    redownload: No,
    rebuild: No,
    remove_make: No,
    sort_by: Votes,
    search_by: NameDesc,
    limit: 0,
    sort_mode: TopDown,
    mode: Mode(
        REPO,
    ),
    aur_filter: false,
    interactive: false,
    completion_interval: 7,
    help: false,
    version: false,
    skip_review: false,
    no_check: false,
    no_confirm: false,
    devel: true,
    clean_after: false,
    provides: Yes,
    pgp_fetch: true,
    combined_upgrade: false,
    batch_install: false,
    use_ask: false,
    save_changes: false,
    clean: 0,
    optional: false,
    complete: false,
    print: false,
    news_on_upgrade: false,
    comments: false,
    ssh: false,
    keep_repo_cache: false,
    fail_fast: false,
    keep_src: false,
    sign: No,
    sign_db: No,
    pre_build_command: None,
    makepkg_bin: "makepkg",
    pacman_bin: "pacman",
    pacman_conf_bin: None,
    git_bin: "git",
    gpg_bin: "gpg",
    sudo_bin: "sudo",
    pkgctl_bin: "pkgctl",
    bat_bin: "bat",
    fm: None,
    sudo_loop: [],
    mflags: [],
    git_flags: [],
    gpg_flags: [],
    sudo_flags: [],
    bat_flags: [],
    fm_flags: [],
    chroot_flags: [],
    pager_cmd: None,
    devel_suffixes: [
        "-git",
        "-cvs",
        "-svn",
        "-bzr",
        "-darcs",
        "-always",
        "-hg",
        "-fossil",
    ],
    no_warn: GlobSet {
        len: 0,
        strats: [],
    },
    no_warn_builder: GlobSetBuilder {
        pats: [],
    },
    install_debug: false,
    upgrade_menu: false,
    makepkg_conf: None,
    pacman_conf: None,
    repos: None,
    chroot_dir: "/var/lib/aurbuild/x86_64",
    chroot: false,
    install: false,
    uninstall: false,
    sysupgrade: false,
    refresh: true,
    quiet: false,
    list: false,
    delete: 0,
    no_install: false,
    env: [],
    db_path: None,
    root: None,
    verbose: false,
    ask: 0,
    arch: None,
    ignore: [],
    ignore_group: [],
    ignore_devel_source: [],
    ignore_devel: GlobSet {
        len: 0,
        strats: [],
    },
    ignore_devel_builder: GlobSetBuilder {
        pats: [],
    },
    assume_installed: [],
    pkgbuild_repos: PkgbuildRepos {
        fetch: Fetch {
            clone_dir: "/home/ralju/.cache/paru/clone/repo",
            diff_dir: "/home/ralju/.cache/paru/diff/repo",
            git: "git",
            git_flags: [],
            aur_url: Url {
                scheme: "https",
                cannot_be_a_base: false,
                username: "",
                password: None,
                host: Some(
                    Domain(
                        "aur.archlinux.org",
                    ),
                ),
                port: None,
                path: "/",
                query: None,
                fragment: None,
            },
        },
        repos: [],
    },
}
debug: <paru::exec> running command: "sudo" "pacman" "--sync" "-y" "--"
[sudo] password for ralju: 
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date
debug: <paru::resolver> AUR depends flags: Flags(TARGET_PROVIDES | MISSING_PROVIDES | CALCULATE_MAKE | CHECK_DEPENDS | REPO)
debug: <paru::exec> running command: "sudo" "pacman" "--sync" "-y" "--"
:: Synchronizing package databases...
 core is up to date
 extra is up to date
 community is up to date
 multilib is up to date