diff --git a/semmeddb/AutoGen_SEMMEDDB.ipynb b/semmeddb/AutoGen_SEMMEDDB.ipynb index 667031a9..0b2c15cc 100644 --- a/semmeddb/AutoGen_SEMMEDDB.ipynb +++ b/semmeddb/AutoGen_SEMMEDDB.ipynb @@ -41,7 +41,7 @@ "metadata": {}, "source": [ "Requirements:\n", - "* install [Biolink-model Toolkit (bmt)](https://github.com/biolink/biolink-model-toolkit/). I'm [installing as a user](https://biolink.github.io/biolink-model-toolkit/intro/intro.html#for-users) with pip (`pip install bmt`). Using release 1.2.1 at the moment.\n", + "* install [Biolink-model Toolkit (bmt)](https://github.com/biolink/biolink-model-toolkit/). I'm [installing as a user](https://biolink.github.io/biolink-model-toolkit/intro/intro.html#for-users) with pip (`pip install bmt`). Using release 1.4.2 at the moment.\n", "* install ruamel.yaml with [pip](https://pypi.org/project/ruamel.yaml/). Using 0.18.6 at the moment. It's more recent than the version from [conda-forge](https://anaconda.org/conda-forge/ruamel_yaml). The documentation is [here](https://yaml.readthedocs.io/en/latest/)\n", "\n", "Files to obtain before starting:\n", @@ -65,8 +65,8 @@ "id": "a5ee5aac", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.575832Z", - "start_time": "2024-04-10T05:27:42.797607Z" + "end_time": "2024-06-12T06:52:45.972438Z", + "start_time": "2024-06-12T06:52:45.220482Z" } }, "outputs": [], @@ -116,8 +116,8 @@ "id": "73408978", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.830713Z", - "start_time": "2024-04-10T05:27:43.579305Z" + "end_time": "2024-06-12T06:52:46.115385Z", + "start_time": "2024-06-12T06:52:45.975297Z" } }, "outputs": [], @@ -173,8 +173,8 @@ "id": "e8150ed6", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.840511Z", - "start_time": "2024-04-10T05:27:43.832956Z" + "end_time": "2024-06-12T06:52:46.123828Z", + "start_time": "2024-06-12T06:52:46.117643Z" } }, "outputs": [ @@ -199,8 +199,8 @@ "id": "57d2dc4a", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.855746Z", - "start_time": "2024-04-10T05:27:43.844259Z" + "end_time": "2024-06-12T06:52:46.138319Z", + "start_time": "2024-06-12T06:52:46.127154Z" } }, "outputs": [ @@ -354,8 +354,8 @@ "id": "181df62c", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.883101Z", - "start_time": "2024-04-10T05:27:43.858227Z" + "end_time": "2024-06-12T06:52:46.163410Z", + "start_time": "2024-06-12T06:52:46.140360Z" } }, "outputs": [ @@ -418,8 +418,8 @@ "id": "2a52d0b4", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.902520Z", - "start_time": "2024-04-10T05:27:43.885793Z" + "end_time": "2024-06-12T06:52:46.180658Z", + "start_time": "2024-06-12T06:52:46.165502Z" } }, "outputs": [ @@ -470,8 +470,8 @@ "id": "d0dd2ed7", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.914067Z", - "start_time": "2024-04-10T05:27:43.906190Z" + "end_time": "2024-06-12T06:52:46.190948Z", + "start_time": "2024-06-12T06:52:46.183181Z" } }, "outputs": [ @@ -627,8 +627,8 @@ "id": "b27b5f43", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.925211Z", - "start_time": "2024-04-10T05:27:43.916302Z" + "end_time": "2024-06-12T06:52:46.200828Z", + "start_time": "2024-06-12T06:52:46.193120Z" } }, "outputs": [ @@ -783,8 +783,8 @@ "id": "5765d868", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.935260Z", - "start_time": "2024-04-10T05:27:43.927585Z" + "end_time": "2024-06-12T06:52:46.209863Z", + "start_time": "2024-06-12T06:52:46.203183Z" } }, "outputs": [ @@ -910,8 +910,8 @@ "id": "dec1bcc5", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.948741Z", - "start_time": "2024-04-10T05:27:43.941265Z" + "end_time": "2024-06-12T06:52:46.222029Z", + "start_time": "2024-06-12T06:52:46.214951Z" } }, "outputs": [ @@ -947,8 +947,8 @@ "id": "0ab643b0", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.961491Z", - "start_time": "2024-04-10T05:27:43.951019Z" + "end_time": "2024-06-12T06:52:46.234447Z", + "start_time": "2024-06-12T06:52:46.224596Z" } }, "outputs": [], @@ -973,8 +973,8 @@ "id": "b6244458", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.975743Z", - "start_time": "2024-04-10T05:27:43.963804Z" + "end_time": "2024-06-12T06:52:46.248322Z", + "start_time": "2024-06-12T06:52:46.236558Z" } }, "outputs": [ @@ -1034,8 +1034,8 @@ "id": "24036b97", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.981496Z", - "start_time": "2024-04-10T05:27:43.977888Z" + "end_time": "2024-06-12T06:52:46.254795Z", + "start_time": "2024-06-12T06:52:46.250866Z" } }, "outputs": [ @@ -1061,8 +1061,8 @@ "id": "949ccb58", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:43.992201Z", - "start_time": "2024-04-10T05:27:43.983651Z" + "end_time": "2024-06-12T06:52:46.267355Z", + "start_time": "2024-06-12T06:52:46.257499Z" } }, "outputs": [ @@ -1200,8 +1200,8 @@ "id": "d470fa70", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:44.005546Z", - "start_time": "2024-04-10T05:27:43.994345Z" + "end_time": "2024-06-12T06:52:46.280501Z", + "start_time": "2024-06-12T06:52:46.269522Z" } }, "outputs": [ @@ -1294,8 +1294,8 @@ "id": "89c14528", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:44.020749Z", - "start_time": "2024-04-10T05:27:44.007597Z" + "end_time": "2024-06-12T06:52:46.294735Z", + "start_time": "2024-06-12T06:52:46.282379Z" } }, "outputs": [ @@ -1457,8 +1457,8 @@ "id": "8c8c04ce", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:44.029739Z", - "start_time": "2024-04-10T05:27:44.023082Z" + "end_time": "2024-06-12T06:52:46.305490Z", + "start_time": "2024-06-12T06:52:46.297064Z" } }, "outputs": [ @@ -1538,8 +1538,8 @@ "id": "0400e8e3", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:44.039007Z", - "start_time": "2024-04-10T05:27:44.032007Z" + "end_time": "2024-06-12T06:52:46.313783Z", + "start_time": "2024-06-12T06:52:46.308290Z" } }, "outputs": [], @@ -1569,8 +1569,8 @@ "id": "683a1f47", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:44.050920Z", - "start_time": "2024-04-10T05:27:44.041391Z" + "end_time": "2024-06-12T06:52:46.325739Z", + "start_time": "2024-06-12T06:52:46.316303Z" } }, "outputs": [ @@ -1716,14 +1716,14 @@ "id": "a7a170a6", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:46.155105Z", - "start_time": "2024-04-10T05:27:44.052932Z" + "end_time": "2024-06-12T06:52:48.291197Z", + "start_time": "2024-06-12T06:52:46.327690Z" } }, "outputs": [], "source": [ - "## set to use biolink-model 4.1.6\n", - "bmt_tool = Toolkit('https://raw.githubusercontent.com/biolink/biolink-model/v4.1.6/biolink-model.yaml')" + "## set to use biolink-model 4.2.1\n", + "bmt_tool = Toolkit('https://raw.githubusercontent.com/biolink/biolink-model/v4.2.1/biolink-model.yaml')" ] }, { @@ -1732,15 +1732,15 @@ "id": "4cc1fad9", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:46.191781Z", - "start_time": "2024-04-10T05:27:46.157217Z" + "end_time": "2024-06-12T06:52:48.326328Z", + "start_time": "2024-06-12T06:52:48.293368Z" } }, "outputs": [ { "data": { "text/plain": [ - "'Small Molecule'" + "'Chemical Entity'" ] }, "execution_count": 21, @@ -1759,8 +1759,8 @@ "id": "c2c14436", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:46.960474Z", - "start_time": "2024-04-10T05:27:46.193834Z" + "end_time": "2024-06-12T06:52:49.133386Z", + "start_time": "2024-06-12T06:52:48.328450Z" } }, "outputs": [], @@ -1787,8 +1787,8 @@ "id": "7fb08392", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:46.967274Z", - "start_time": "2024-04-10T05:27:46.962480Z" + "end_time": "2024-06-12T06:52:49.140810Z", + "start_time": "2024-06-12T06:52:49.135658Z" } }, "outputs": [ @@ -1821,8 +1821,8 @@ "id": "22daf133", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:46.973022Z", - "start_time": "2024-04-10T05:27:46.969578Z" + "end_time": "2024-06-12T06:52:49.147661Z", + "start_time": "2024-06-12T06:52:49.143289Z" } }, "outputs": [], @@ -1837,8 +1837,8 @@ "id": "044843d6", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:46.986830Z", - "start_time": "2024-04-10T05:27:46.975569Z" + "end_time": "2024-06-12T06:52:49.160877Z", + "start_time": "2024-06-12T06:52:49.149794Z" } }, "outputs": [ @@ -2029,8 +2029,8 @@ "id": "eb7ea639", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:46.993764Z", - "start_time": "2024-04-10T05:27:46.988933Z" + "end_time": "2024-06-12T06:52:49.167390Z", + "start_time": "2024-06-12T06:52:49.163062Z" } }, "outputs": [ @@ -2039,10 +2039,10 @@ "text/plain": [ "array(['Polypeptide', 'Disease', 'Activity', 'Cohort', None,\n", " 'Invertebrate', 'PhenotypicFeature', 'OrganismalEntity',\n", - " 'AnatomicalEntity', 'Drug', 'SmallMolecule', 'Bacterium',\n", + " 'AnatomicalEntity', 'Drug', 'ChemicalEntity', 'Bacterium',\n", " 'Behavior', 'Phenomenon', 'Device', 'GrossAnatomicalStructure',\n", - " 'CellularComponent', 'PhysiologicalProcess', 'Cell',\n", - " 'ChemicalEntity', 'InformationContentEntity', 'ClinicalAttribute',\n", + " 'SmallMolecule', 'CellularComponent', 'PhysiologicalProcess',\n", + " 'Cell', 'InformationContentEntity', 'ClinicalAttribute',\n", " 'Procedure', 'BiologicalEntity', 'Protein', 'Event',\n", " 'DiseaseOrPhenotypicFeature', 'Fungus', 'Food',\n", " 'GeographicLocation', 'GenomicEntity', 'Agent', 'Human',\n", @@ -2069,8 +2069,8 @@ "id": "fc902a02", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.005486Z", - "start_time": "2024-04-10T05:27:46.996227Z" + "end_time": "2024-06-12T06:52:49.179178Z", + "start_time": "2024-06-12T06:52:49.170261Z" } }, "outputs": [ @@ -2103,139 +2103,43 @@ " \n", " \n", " \n", - " 0\n", - " T003\n", - " Alga\n", - " alga\n", - " None\n", - " \n", - " \n", - " 118\n", - " T194\n", - " Archaeon\n", - " arch\n", - " None\n", - " \n", - " \n", - " 17\n", - " T022\n", - " Body System\n", - " bdsy\n", - " None\n", - " \n", - " \n", - " 7\n", - " T012\n", - " Bird\n", - " bird\n", - " None\n", - " \n", - " \n", - " 81\n", - " T091\n", - " Biomedical Occupation or Discipline\n", - " bmod\n", - " None\n", - " \n", - " \n", - " 98\n", - " T120\n", - " Chemical Viewed Functionally\n", - " chvf\n", - " None\n", - " \n", - " \n", - " 94\n", - " T104\n", - " Chemical Viewed Structurally\n", - " chvs\n", - " None\n", - " \n", - " \n", - " 125\n", - " T204\n", - " Eukaryote\n", - " euka\n", - " None\n", - " \n", - " \n", - " 16\n", - " T021\n", - " Fully Formed Anatomical Structure\n", - " ffas\n", - " None\n", - " \n", - " \n", - " 8\n", - " T013\n", - " Fish\n", - " fish\n", - " None\n", - " \n", - " \n", - " 37\n", - " T045\n", - " Genetic Function\n", - " genf\n", - " None\n", - " \n", - " \n", - " 3\n", - " T009\n", - " Invertebrate\n", - " invt\n", - " None\n", - " \n", - " \n", - " 80\n", - " T090\n", - " Occupation or Discipline\n", - " ocdi\n", - " None\n", + " 101\n", + " T123\n", + " Biologically Active Substance\n", + " bacs\n", + " ChemicalEntity\n", " \n", " \n", - " 7\n", - " T001\n", - " Organism\n", - " orgm\n", - " None\n", + " 93\n", + " T103\n", + " Chemical\n", + " chem\n", + " ChemicalEntity\n", " \n", " \n", - " 9\n", - " T014\n", - " Reptile\n", - " rept\n", - " None\n", + " 107\n", + " T131\n", + " Hazardous or Poisonous Substance\n", + " hops\n", + " ChemicalEntity\n", " \n", " \n", - " 8\n", - " T006\n", - " Rickettsia or Chlamydia\n", - " rich\n", - " None\n", + " 108\n", + " T167\n", + " Substance\n", + " sbst\n", + " ChemicalEntity\n", " \n", " \n", "\n", "" ], "text/plain": [ - " UI FullName Abbrev BiolinkMapping\n", - "0 T003 Alga alga None\n", - "118 T194 Archaeon arch None\n", - "17 T022 Body System bdsy None\n", - "7 T012 Bird bird None\n", - "81 T091 Biomedical Occupation or Discipline bmod None\n", - "98 T120 Chemical Viewed Functionally chvf None\n", - "94 T104 Chemical Viewed Structurally chvs None\n", - "125 T204 Eukaryote euka None\n", - "16 T021 Fully Formed Anatomical Structure ffas None\n", - "8 T013 Fish fish None\n", - "37 T045 Genetic Function genf None\n", - "3 T009 Invertebrate invt None\n", - "80 T090 Occupation or Discipline ocdi None\n", - "7 T001 Organism orgm None\n", - "9 T014 Reptile rept None\n", - "8 T006 Rickettsia or Chlamydia rich None" + " UI FullName Abbrev BiolinkMapping\n", + "101 T123 Biologically Active Substance bacs ChemicalEntity\n", + "93 T103 Chemical chem ChemicalEntity\n", + "107 T131 Hazardous or Poisonous Substance hops ChemicalEntity\n", + "108 T167 Substance sbst ChemicalEntity" ] }, "execution_count": 27, @@ -2244,8 +2148,8 @@ } ], "source": [ - "# SEMMED_semtypes[SEMMED_semtypes['BiolinkMapping'] == 'Vertebrate']\n", - "SEMMED_semtypes[SEMMED_semtypes['BiolinkMapping'].isna()]" + "SEMMED_semtypes[SEMMED_semtypes['BiolinkMapping'] == 'ChemicalEntity']\n", + "# SEMMED_semtypes[SEMMED_semtypes['BiolinkMapping'].isna()]" ] }, { @@ -2262,8 +2166,8 @@ "id": "e641ae5c", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.026525Z", - "start_time": "2024-04-10T05:27:47.019619Z" + "end_time": "2024-06-12T06:52:49.198314Z", + "start_time": "2024-06-12T06:52:49.191826Z" } }, "outputs": [], @@ -2305,8 +2209,8 @@ "id": "882e7bde", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.032191Z", - "start_time": "2024-04-10T05:27:47.029014Z" + "end_time": "2024-06-12T06:52:49.204921Z", + "start_time": "2024-06-12T06:52:49.200653Z" } }, "outputs": [], @@ -2320,8 +2224,8 @@ "id": "f4220655", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.038412Z", - "start_time": "2024-04-10T05:27:47.034283Z" + "end_time": "2024-06-12T06:52:49.212821Z", + "start_time": "2024-06-12T06:52:49.207359Z" } }, "outputs": [ @@ -2369,8 +2273,8 @@ "id": "a3a9da81", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.044614Z", - "start_time": "2024-04-10T05:27:47.040793Z" + "end_time": "2024-06-12T06:52:49.219830Z", + "start_time": "2024-06-12T06:52:49.215410Z" } }, "outputs": [], @@ -2476,8 +2380,8 @@ "id": "8cf5b450", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.052717Z", - "start_time": "2024-04-10T05:27:47.047568Z" + "end_time": "2024-06-12T06:52:49.228477Z", + "start_time": "2024-06-12T06:52:49.222419Z" } }, "outputs": [ @@ -2528,8 +2432,8 @@ "id": "308358e6", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.064442Z", - "start_time": "2024-04-10T05:27:47.054762Z" + "end_time": "2024-06-12T06:52:49.241709Z", + "start_time": "2024-06-12T06:52:49.230414Z" } }, "outputs": [], @@ -2548,8 +2452,8 @@ "id": "67861c2e", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.077839Z", - "start_time": "2024-04-10T05:27:47.066946Z" + "end_time": "2024-06-12T06:52:49.257360Z", + "start_time": "2024-06-12T06:52:49.244380Z" } }, "outputs": [ @@ -2601,8 +2505,8 @@ "id": "647e4065", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.089896Z", - "start_time": "2024-04-10T05:27:47.080357Z" + "end_time": "2024-06-12T06:52:49.270009Z", + "start_time": "2024-06-12T06:52:49.259876Z" } }, "outputs": [ @@ -2777,8 +2681,8 @@ "id": "52496738", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.097093Z", - "start_time": "2024-04-10T05:27:47.092000Z" + "end_time": "2024-06-12T06:52:49.277726Z", + "start_time": "2024-06-12T06:52:49.272472Z" } }, "outputs": [], @@ -2807,8 +2711,8 @@ "id": "b05e90f6", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.104567Z", - "start_time": "2024-04-10T05:27:47.099114Z" + "end_time": "2024-06-12T06:52:49.285243Z", + "start_time": "2024-06-12T06:52:49.280060Z" } }, "outputs": [ @@ -2859,8 +2763,8 @@ "id": "6a3d217d", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.119306Z", - "start_time": "2024-04-10T05:27:47.106867Z" + "end_time": "2024-06-12T06:52:49.300157Z", + "start_time": "2024-06-12T06:52:49.287277Z" } }, "outputs": [], @@ -2886,8 +2790,8 @@ "id": "ec402da4", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.132235Z", - "start_time": "2024-04-10T05:27:47.121421Z" + "end_time": "2024-06-12T06:52:49.313938Z", + "start_time": "2024-06-12T06:52:49.302882Z" } }, "outputs": [ @@ -3018,8 +2922,8 @@ "id": "979e0da8", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.500487Z", - "start_time": "2024-04-10T05:27:47.134406Z" + "end_time": "2024-06-12T06:52:49.685571Z", + "start_time": "2024-06-12T06:52:49.315997Z" } }, "outputs": [], @@ -3035,8 +2939,8 @@ "id": "5d7f7944", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.519271Z", - "start_time": "2024-04-10T05:27:47.502957Z" + "end_time": "2024-06-12T06:52:49.704098Z", + "start_time": "2024-06-12T06:52:49.687656Z" } }, "outputs": [ @@ -3452,8 +3356,8 @@ "id": "77adf097", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.533655Z", - "start_time": "2024-04-10T05:27:47.521679Z" + "end_time": "2024-06-12T06:52:49.719118Z", + "start_time": "2024-06-12T06:52:49.706772Z" } }, "outputs": [], @@ -3514,8 +3418,8 @@ "id": "80e84505", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.539546Z", - "start_time": "2024-04-10T05:27:47.535745Z" + "end_time": "2024-06-12T06:52:49.724938Z", + "start_time": "2024-06-12T06:52:49.721156Z" } }, "outputs": [], @@ -3538,8 +3442,8 @@ "id": "f9acdf7f", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.544495Z", - "start_time": "2024-04-10T05:27:47.541920Z" + "end_time": "2024-06-12T06:52:49.729544Z", + "start_time": "2024-06-12T06:52:49.727052Z" } }, "outputs": [], @@ -3567,8 +3471,8 @@ "id": "52cfbbc4", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.553701Z", - "start_time": "2024-04-10T05:27:47.546681Z" + "end_time": "2024-06-12T06:52:49.738922Z", + "start_time": "2024-06-12T06:52:49.731639Z" } }, "outputs": [], @@ -3601,8 +3505,8 @@ "id": "9718fe3a", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.569460Z", - "start_time": "2024-04-10T05:27:47.555747Z" + "end_time": "2024-06-12T06:52:49.754769Z", + "start_time": "2024-06-12T06:52:49.740894Z" } }, "outputs": [ @@ -4128,8 +4032,8 @@ "id": "b121018d", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.581835Z", - "start_time": "2024-04-10T05:27:47.571680Z" + "end_time": "2024-06-12T06:52:49.766600Z", + "start_time": "2024-06-12T06:52:49.756728Z" }, "scrolled": true }, @@ -4235,8 +4139,8 @@ "id": "85224c41", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.588670Z", - "start_time": "2024-04-10T05:27:47.583931Z" + "end_time": "2024-06-12T06:52:49.773419Z", + "start_time": "2024-06-12T06:52:49.768764Z" } }, "outputs": [], @@ -4252,8 +4156,8 @@ "id": "50027e5e", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.597225Z", - "start_time": "2024-04-10T05:27:47.590806Z" + "end_time": "2024-06-12T06:52:49.782828Z", + "start_time": "2024-06-12T06:52:49.775367Z" } }, "outputs": [], @@ -4277,8 +4181,8 @@ "id": "946dd392", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.612195Z", - "start_time": "2024-04-10T05:27:47.599217Z" + "end_time": "2024-06-12T06:52:49.797868Z", + "start_time": "2024-06-12T06:52:49.785182Z" } }, "outputs": [ @@ -4794,8 +4698,8 @@ "id": "9079161f", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.621915Z", - "start_time": "2024-04-10T05:27:47.614301Z" + "end_time": "2024-06-12T06:52:49.806848Z", + "start_time": "2024-06-12T06:52:49.799781Z" } }, "outputs": [ @@ -4848,8 +4752,8 @@ "id": "ca959b8c", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.633949Z", - "start_time": "2024-04-10T05:27:47.623814Z" + "end_time": "2024-06-12T06:52:49.819171Z", + "start_time": "2024-06-12T06:52:49.809399Z" } }, "outputs": [ @@ -4941,8 +4845,8 @@ "id": "5e25a929", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.639812Z", - "start_time": "2024-04-10T05:27:47.635849Z" + "end_time": "2024-06-12T06:52:49.825451Z", + "start_time": "2024-06-12T06:52:49.821458Z" } }, "outputs": [ @@ -4968,8 +4872,8 @@ "id": "5a46158c", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.656583Z", - "start_time": "2024-04-10T05:27:47.641876Z" + "end_time": "2024-06-12T06:52:49.842543Z", + "start_time": "2024-06-12T06:52:49.827823Z" } }, "outputs": [ @@ -5448,8 +5352,8 @@ "id": "64cacd52", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.664460Z", - "start_time": "2024-04-10T05:27:47.658972Z" + "end_time": "2024-06-12T06:52:49.849733Z", + "start_time": "2024-06-12T06:52:49.844502Z" } }, "outputs": [], @@ -5464,8 +5368,8 @@ "id": "530e3631", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.677400Z", - "start_time": "2024-04-10T05:27:47.666281Z" + "end_time": "2024-06-12T06:52:49.862898Z", + "start_time": "2024-06-12T06:52:49.851857Z" } }, "outputs": [ @@ -5517,8 +5421,8 @@ "id": "863543b6", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.691724Z", - "start_time": "2024-04-10T05:27:47.679524Z" + "end_time": "2024-06-12T06:52:49.876531Z", + "start_time": "2024-06-12T06:52:49.865524Z" } }, "outputs": [ @@ -5738,8 +5642,8 @@ "id": "5f404ea6", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.707099Z", - "start_time": "2024-04-10T05:27:47.693895Z" + "end_time": "2024-06-12T06:52:49.891784Z", + "start_time": "2024-06-12T06:52:49.879071Z" } }, "outputs": [ @@ -5884,8 +5788,8 @@ "id": "efd0d556", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.718306Z", - "start_time": "2024-04-10T05:27:47.709235Z" + "end_time": "2024-06-12T06:52:49.902430Z", + "start_time": "2024-06-12T06:52:49.894117Z" } }, "outputs": [], @@ -5934,8 +5838,8 @@ "id": "32c37c3b", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.735751Z", - "start_time": "2024-04-10T05:27:47.720413Z" + "end_time": "2024-06-12T06:52:49.920125Z", + "start_time": "2024-06-12T06:52:49.904924Z" } }, "outputs": [ @@ -6227,8 +6131,8 @@ "id": "89bda465", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.741723Z", - "start_time": "2024-04-10T05:27:47.738120Z" + "end_time": "2024-06-12T06:52:49.926000Z", + "start_time": "2024-06-12T06:52:49.922141Z" } }, "outputs": [], @@ -6244,8 +6148,8 @@ "id": "1bb3d990", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:47.758891Z", - "start_time": "2024-04-10T05:27:47.743819Z" + "end_time": "2024-06-12T06:52:49.942948Z", + "start_time": "2024-06-12T06:52:49.927856Z" } }, "outputs": [ @@ -6553,8 +6457,8 @@ "id": "e5bb1ec1", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:51.762171Z", - "start_time": "2024-04-10T05:27:47.761051Z" + "end_time": "2024-06-12T06:52:53.896780Z", + "start_time": "2024-06-12T06:52:49.945112Z" } }, "outputs": [], @@ -6579,8 +6483,8 @@ "id": "bf7a6309", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:51.775598Z", - "start_time": "2024-04-10T05:27:51.764613Z" + "end_time": "2024-06-12T06:52:53.910346Z", + "start_time": "2024-06-12T06:52:53.899157Z" } }, "outputs": [ @@ -6771,8 +6675,8 @@ "id": "83675d58", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:51.791120Z", - "start_time": "2024-04-10T05:27:51.777521Z" + "end_time": "2024-06-12T06:52:53.927403Z", + "start_time": "2024-06-12T06:52:53.912892Z" } }, "outputs": [ @@ -6968,8 +6872,8 @@ "id": "b8f25836", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:51.808531Z", - "start_time": "2024-04-10T05:27:51.793381Z" + "end_time": "2024-06-12T06:52:53.942754Z", + "start_time": "2024-06-12T06:52:53.929564Z" } }, "outputs": [ @@ -7030,8 +6934,8 @@ "id": "3d0ed289", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:51.819456Z", - "start_time": "2024-04-10T05:27:51.810674Z" + "end_time": "2024-06-12T06:52:53.952668Z", + "start_time": "2024-06-12T06:52:53.944774Z" } }, "outputs": [ @@ -7072,8 +6976,8 @@ "id": "ddd78804", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.716609Z", - "start_time": "2024-04-10T05:27:51.821821Z" + "end_time": "2024-06-12T06:52:54.872191Z", + "start_time": "2024-06-12T06:52:53.955161Z" } }, "outputs": [ @@ -7108,8 +7012,8 @@ "id": "665de94a", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.737097Z", - "start_time": "2024-04-10T05:27:52.719088Z" + "end_time": "2024-06-12T06:52:54.891682Z", + "start_time": "2024-06-12T06:52:54.874466Z" } }, "outputs": [ @@ -7190,8 +7094,8 @@ "id": "86920c33", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.752219Z", - "start_time": "2024-04-10T05:27:52.739252Z" + "end_time": "2024-06-12T06:52:54.906723Z", + "start_time": "2024-06-12T06:52:54.894213Z" } }, "outputs": [ @@ -7346,8 +7250,8 @@ "id": "2c859df9", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.767949Z", - "start_time": "2024-04-10T05:27:52.754199Z" + "end_time": "2024-06-12T06:52:54.922459Z", + "start_time": "2024-06-12T06:52:54.909497Z" } }, "outputs": [ @@ -7451,8 +7355,8 @@ "id": "b53030eb", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.779038Z", - "start_time": "2024-04-10T05:27:52.769948Z" + "end_time": "2024-06-12T06:52:54.934145Z", + "start_time": "2024-06-12T06:52:54.925137Z" } }, "outputs": [], @@ -7480,8 +7384,8 @@ "id": "70092440", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.792370Z", - "start_time": "2024-04-10T05:27:52.781709Z" + "end_time": "2024-06-12T06:52:54.948076Z", + "start_time": "2024-06-12T06:52:54.936224Z" } }, "outputs": [ @@ -7664,8 +7568,8 @@ "id": "9e435399", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.804926Z", - "start_time": "2024-04-10T05:27:52.794422Z" + "end_time": "2024-06-12T06:52:54.959492Z", + "start_time": "2024-06-12T06:52:54.950371Z" } }, "outputs": [], @@ -7694,8 +7598,8 @@ "id": "a0fe51f5", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.817834Z", - "start_time": "2024-04-10T05:27:52.806661Z" + "end_time": "2024-06-12T06:52:54.973192Z", + "start_time": "2024-06-12T06:52:54.961799Z" } }, "outputs": [ @@ -7890,8 +7794,8 @@ "id": "3f42bd07", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.827839Z", - "start_time": "2024-04-10T05:27:52.820269Z" + "end_time": "2024-06-12T06:52:54.983330Z", + "start_time": "2024-06-12T06:52:54.975768Z" } }, "outputs": [], @@ -7910,8 +7814,8 @@ "id": "6c651d23", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.842824Z", - "start_time": "2024-04-10T05:27:52.829976Z" + "end_time": "2024-06-12T06:52:54.999097Z", + "start_time": "2024-06-12T06:52:54.985584Z" } }, "outputs": [ @@ -8049,8 +7953,8 @@ "id": "cc7864f5", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.873640Z", - "start_time": "2024-04-10T05:27:52.845199Z" + "end_time": "2024-06-12T06:52:55.029931Z", + "start_time": "2024-06-12T06:52:55.001145Z" } }, "outputs": [ @@ -8302,8 +8206,8 @@ "id": "b8d843fb", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:52.910605Z", - "start_time": "2024-04-10T05:27:52.875576Z" + "end_time": "2024-06-12T06:52:55.067851Z", + "start_time": "2024-06-12T06:52:55.032076Z" } }, "outputs": [ @@ -8353,7 +8257,7 @@ " PART_OF\n", " umls\n", " aapp\n", - " SmallMolecule\n", + " ChemicalEntity\n", " Polypeptide\n", " part_of\n", " None\n", @@ -8515,7 +8419,7 @@ " INTERACTS_WITH\n", " ncbigene\n", " aapp\n", - " SmallMolecule\n", + " ChemicalEntity\n", " Polypeptide\n", " interacts_with\n", " None\n", @@ -8564,7 +8468,7 @@ "5050 ncbigene horm TREATS umls \n", "\n", " OriginalObject BiolinkSubject BiolinkObject \\\n", - "146 aapp SmallMolecule Polypeptide \n", + "146 aapp ChemicalEntity Polypeptide \n", "149 gngm Polypeptide Gene \n", "151 aapp Polypeptide Polypeptide \n", "152 neop Polypeptide Disease \n", @@ -8573,7 +8477,7 @@ "4971 aapp SmallMolecule Polypeptide \n", "4993 neop BiologicalEntity Disease \n", "5004 nusq Polypeptide NucleicAcidEntity \n", - "5005 aapp SmallMolecule Polypeptide \n", + "5005 aapp ChemicalEntity Polypeptide \n", "5050 anab SmallMolecule PhenotypicFeature \n", "\n", " BMPred BMQualPred BMObjAsp \\\n", @@ -8722,7 +8626,7 @@ " PART_OF\n", " ncbigene\n", " aapp\n", - " SmallMolecule\n", + " ChemicalEntity\n", " Polypeptide\n", " part_of\n", " None\n", @@ -8776,7 +8680,7 @@ " INTERACTS_WITH\n", " ncbigene\n", " aapp\n", - " SmallMolecule\n", + " ChemicalEntity\n", " Polypeptide\n", " interacts_with\n", " None\n", @@ -8882,10 +8786,10 @@ "31 aapp AnatomicalEntity Polypeptide \n", "39 aapp GrossAnatomicalStructure Polypeptide \n", "40 aapp Cell Polypeptide \n", - "63 aapp SmallMolecule Polypeptide \n", + "63 aapp ChemicalEntity Polypeptide \n", "101 aapp GrossAnatomicalStructure Polypeptide \n", "... ... ... ... \n", - "5005 aapp SmallMolecule Polypeptide \n", + "5005 aapp ChemicalEntity Polypeptide \n", "5019 imft PhysiologicalProcess BiologicalEntity \n", "5032 aapp SmallMolecule Polypeptide \n", "5034 phsu Procedure SmallMolecule \n", @@ -8939,8 +8843,8 @@ "id": "480daedc", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.114504Z", - "start_time": "2024-04-10T05:27:52.913078Z" + "end_time": "2024-06-12T06:52:55.275933Z", + "start_time": "2024-06-12T06:52:55.070054Z" } }, "outputs": [], @@ -8959,8 +8863,8 @@ "id": "08e436d1", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.133631Z", - "start_time": "2024-04-10T05:27:53.116686Z" + "end_time": "2024-06-12T06:52:55.295517Z", + "start_time": "2024-06-12T06:52:55.278256Z" } }, "outputs": [ @@ -9116,8 +9020,8 @@ "id": "222c6bd1", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.158637Z", - "start_time": "2024-04-10T05:27:53.150510Z" + "end_time": "2024-06-12T06:52:55.320719Z", + "start_time": "2024-06-12T06:52:55.312809Z" } }, "outputs": [], @@ -9219,8 +9123,8 @@ "id": "83b2edf4", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.165220Z", - "start_time": "2024-04-10T05:27:53.160529Z" + "end_time": "2024-06-12T06:52:55.328192Z", + "start_time": "2024-06-12T06:52:55.323177Z" } }, "outputs": [ @@ -9264,8 +9168,8 @@ "id": "723f107d", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.173284Z", - "start_time": "2024-04-10T05:27:53.167606Z" + "end_time": "2024-06-12T06:52:55.335613Z", + "start_time": "2024-06-12T06:52:55.330210Z" } }, "outputs": [ @@ -9309,8 +9213,8 @@ "id": "c55ecc04", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.181272Z", - "start_time": "2024-04-10T05:27:53.176123Z" + "end_time": "2024-06-12T06:52:55.343338Z", + "start_time": "2024-06-12T06:52:55.338300Z" } }, "outputs": [ @@ -9357,8 +9261,8 @@ "id": "ba5c9ffa", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.188235Z", - "start_time": "2024-04-10T05:27:53.183101Z" + "end_time": "2024-06-12T06:52:55.350513Z", + "start_time": "2024-06-12T06:52:55.345755Z" } }, "outputs": [ @@ -9405,8 +9309,8 @@ "id": "8effdfd9", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.211701Z", - "start_time": "2024-04-10T05:27:53.190469Z" + "end_time": "2024-06-12T06:52:55.368649Z", + "start_time": "2024-06-12T06:52:55.352607Z" } }, "outputs": [ @@ -9450,31 +9354,13 @@ " \n", " \n", " \n", - " 265\n", - " ncbigene\n", - " aapp\n", - " STIMULATES\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " affects\n", - " causes\n", - " activity_or_abundance\n", - " increased\n", - " affected_by\n", - " caused_by\n", - " activity_or_abundance\n", - " increased\n", - " \n", - " \n", - " 336\n", - " ncbigene\n", - " gngm\n", + " 956\n", + " umls\n", + " hops\n", " STIMULATES\n", " ncbigene\n", " gngm\n", - " Gene\n", + " ChemicalEntity\n", " Gene\n", " affects\n", " causes\n", @@ -9486,67 +9372,13 @@ " increased\n", " \n", " \n", - " 343\n", - " ncbigene\n", - " aapp\n", - " INTERACTS_WITH\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 473\n", - " ncbigene\n", - " gngm\n", - " INTERACTS_WITH\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 478\n", - " ncbigene\n", - " gngm\n", - " INTERACTS_WITH\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 489\n", - " ncbigene\n", - " gngm\n", + " 1632\n", + " umls\n", + " hops\n", " INHIBITS\n", " ncbigene\n", " gngm\n", - " Gene\n", + " ChemicalEntity\n", " Gene\n", " affects\n", " causes\n", @@ -9558,13 +9390,13 @@ " decreased\n", " \n", " \n", - " 516\n", - " ncbigene\n", - " aapp\n", + " 2181\n", + " umls\n", + " hops\n", " INTERACTS_WITH\n", " ncbigene\n", " gngm\n", - " Gene\n", + " ChemicalEntity\n", " Gene\n", " interacts_with\n", " None\n", @@ -9576,67 +9408,31 @@ " None\n", " \n", " \n", - " 566\n", - " ncbigene\n", - " aapp\n", - " COEXISTS_WITH\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " coexists_with\n", - " None\n", - " None\n", - " None\n", - " coexists_with\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 591\n", - " ncbigene\n", - " bacs\n", - " PART_OF\n", + " 2239\n", + " umls\n", + " hops\n", + " INTERACTS_WITH\n", " ncbigene\n", " aapp\n", + " ChemicalEntity\n", " Gene\n", - " Gene\n", - " part_of\n", + " interacts_with\n", " None\n", " None\n", " None\n", - " has_part\n", + " interacts_with\n", " None\n", " None\n", " None\n", " \n", " \n", - " 659\n", - " ncbigene\n", - " aapp\n", - " INHIBITS\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " affects\n", - " causes\n", - " activity_or_abundance\n", - " decreased\n", - " affected_by\n", - " caused_by\n", - " activity_or_abundance\n", - " decreased\n", - " \n", - " \n", - " 719\n", - " ncbigene\n", - " gngm\n", + " 2736\n", + " umls\n", + " hops\n", " COEXISTS_WITH\n", " ncbigene\n", " gngm\n", - " Gene\n", + " ChemicalEntity\n", " Gene\n", " coexists_with\n", " None\n", @@ -9648,49 +9444,13 @@ " None\n", " \n", " \n", - " 868\n", - " ncbigene\n", - " aapp\n", - " INHIBITS\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " affects\n", - " causes\n", - " activity_or_abundance\n", - " decreased\n", - " affected_by\n", - " caused_by\n", - " activity_or_abundance\n", - " decreased\n", - " \n", - " \n", - " 902\n", - " ncbigene\n", - " gngm\n", - " PRODUCES\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " produces\n", - " None\n", - " None\n", - " None\n", - " produced_by\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 1174\n", - " ncbigene\n", - " gngm\n", + " 3029\n", + " umls\n", + " hops\n", " COEXISTS_WITH\n", " ncbigene\n", " aapp\n", - " Gene\n", + " ChemicalEntity\n", " Gene\n", " coexists_with\n", " None\n", @@ -9702,13 +9462,13 @@ " None\n", " \n", " \n", - " 1357\n", - " ncbigene\n", - " aapp\n", + " 3184\n", + " umls\n", + " hops\n", " STIMULATES\n", " ncbigene\n", " aapp\n", - " Gene\n", + " ChemicalEntity\n", " Gene\n", " affects\n", " causes\n", @@ -9720,346 +9480,22 @@ " increased\n", " \n", " \n", - " 1565\n", - " ncbigene\n", - " gngm\n", - " STIMULATES\n", + " 4671\n", + " umls\n", + " hops\n", + " INHIBITS\n", " ncbigene\n", " aapp\n", - " Gene\n", + " ChemicalEntity\n", " Gene\n", " affects\n", " causes\n", " activity_or_abundance\n", - " increased\n", + " decreased\n", " affected_by\n", " caused_by\n", " activity_or_abundance\n", - " increased\n", - " \n", - " \n", - " 1835\n", - " ncbigene\n", - " gngm\n", - " INHIBITS\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " affects\n", - " causes\n", - " activity_or_abundance\n", - " decreased\n", - " affected_by\n", - " caused_by\n", - " activity_or_abundance\n", - " decreased\n", - " \n", - " \n", - " 2281\n", - " ncbigene\n", - " aapp\n", - " COEXISTS_WITH\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " coexists_with\n", - " None\n", - " None\n", - " None\n", - " coexists_with\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 2803\n", - " ncbigene\n", - " aapp\n", - " PRODUCES\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " produces\n", - " None\n", - " None\n", - " None\n", - " produced_by\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 3246\n", - " ncbigene\n", - " aapp\n", - " PART_OF\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " part_of\n", - " None\n", - " None\n", - " None\n", - " has_part\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 3476\n", - " ncbigene\n", - " aapp\n", - " same_as\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " close_match\n", - " None\n", - " None\n", - " None\n", - " close_match\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 3790\n", - " ncbigene\n", - " aapp\n", - " INTERACTS_WITH\n", - " ncbigene\n", - " enzy\n", - " Gene\n", - " Gene\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 3986\n", - " ncbigene\n", - " aapp\n", - " CONVERTS_TO\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " derives_into\n", - " None\n", - " None\n", - " None\n", - " derives_from\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 4174\n", - " ncbigene\n", - " gngm\n", - " PRODUCES\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " produces\n", - " None\n", - " None\n", - " None\n", - " produced_by\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 4221\n", - " ncbigene\n", - " gngm\n", - " same_as\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " close_match\n", - " None\n", - " None\n", - " None\n", - " close_match\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 4433\n", - " ncbigene\n", - " phsu\n", - " INHIBITS\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " affects\n", - " causes\n", - " activity_or_abundance\n", - " decreased\n", - " affected_by\n", - " caused_by\n", - " activity_or_abundance\n", - " decreased\n", - " \n", - " \n", - " 4464\n", - " ncbigene\n", - " phsu\n", - " STIMULATES\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " affects\n", - " causes\n", - " activity_or_abundance\n", - " increased\n", - " affected_by\n", - " caused_by\n", - " activity_or_abundance\n", - " increased\n", - " \n", - " \n", - " 4480\n", - " ncbigene\n", - " bacs\n", - " STIMULATES\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " affects\n", - " causes\n", - " activity_or_abundance\n", - " increased\n", - " affected_by\n", - " caused_by\n", - " activity_or_abundance\n", - " increased\n", - " \n", - " \n", - " 4662\n", - " ncbigene\n", - " gngm\n", - " CONVERTS_TO\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " derives_into\n", - " None\n", - " None\n", - " None\n", - " derives_from\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 4713\n", - " ncbigene\n", - " horm\n", - " INTERACTS_WITH\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 4732\n", - " ncbigene\n", - " gngm\n", - " INTERACTS_WITH\n", - " ncbigene\n", - " phsu\n", - " Gene\n", - " Gene\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 4781\n", - " ncbigene\n", - " horm\n", - " STIMULATES\n", - " ncbigene\n", - " gngm\n", - " Gene\n", - " Gene\n", - " affects\n", - " causes\n", - " activity_or_abundance\n", - " increased\n", - " affected_by\n", - " caused_by\n", - " activity_or_abundance\n", - " increased\n", - " \n", - " \n", - " 4971\n", - " ncbigene\n", - " phsu\n", - " INTERACTS_WITH\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " \n", - " \n", - " 5005\n", - " ncbigene\n", - " bacs\n", - " INTERACTS_WITH\n", - " ncbigene\n", - " aapp\n", - " Gene\n", - " Gene\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", - " interacts_with\n", - " None\n", - " None\n", - " None\n", + " decreased\n", " \n", " \n", "\n", @@ -10067,148 +9503,44 @@ ], "text/plain": [ " SubjectPrefix OriginalSubject OriginalPredicate ObjectPrefix \\\n", - "265 ncbigene aapp STIMULATES ncbigene \n", - "336 ncbigene gngm STIMULATES ncbigene \n", - "343 ncbigene aapp INTERACTS_WITH ncbigene \n", - "473 ncbigene gngm INTERACTS_WITH ncbigene \n", - "478 ncbigene gngm INTERACTS_WITH ncbigene \n", - "489 ncbigene gngm INHIBITS ncbigene \n", - "516 ncbigene aapp INTERACTS_WITH ncbigene \n", - "566 ncbigene aapp COEXISTS_WITH ncbigene \n", - "591 ncbigene bacs PART_OF ncbigene \n", - "659 ncbigene aapp INHIBITS ncbigene \n", - "719 ncbigene gngm COEXISTS_WITH ncbigene \n", - "868 ncbigene aapp INHIBITS ncbigene \n", - "902 ncbigene gngm PRODUCES ncbigene \n", - "1174 ncbigene gngm COEXISTS_WITH ncbigene \n", - "1357 ncbigene aapp STIMULATES ncbigene \n", - "1565 ncbigene gngm STIMULATES ncbigene \n", - "1835 ncbigene gngm INHIBITS ncbigene \n", - "2281 ncbigene aapp COEXISTS_WITH ncbigene \n", - "2803 ncbigene aapp PRODUCES ncbigene \n", - "3246 ncbigene aapp PART_OF ncbigene \n", - "3476 ncbigene aapp same_as ncbigene \n", - "3790 ncbigene aapp INTERACTS_WITH ncbigene \n", - "3986 ncbigene aapp CONVERTS_TO ncbigene \n", - "4174 ncbigene gngm PRODUCES ncbigene \n", - "4221 ncbigene gngm same_as ncbigene \n", - "4433 ncbigene phsu INHIBITS ncbigene \n", - "4464 ncbigene phsu STIMULATES ncbigene \n", - "4480 ncbigene bacs STIMULATES ncbigene \n", - "4662 ncbigene gngm CONVERTS_TO ncbigene \n", - "4713 ncbigene horm INTERACTS_WITH ncbigene \n", - "4732 ncbigene gngm INTERACTS_WITH ncbigene \n", - "4781 ncbigene horm STIMULATES ncbigene \n", - "4971 ncbigene phsu INTERACTS_WITH ncbigene \n", - "5005 ncbigene bacs INTERACTS_WITH ncbigene \n", - "\n", - " OriginalObject BiolinkSubject BiolinkObject BMPred BMQualPred \\\n", - "265 gngm Gene Gene affects causes \n", - "336 gngm Gene Gene affects causes \n", - "343 aapp Gene Gene interacts_with None \n", - "473 aapp Gene Gene interacts_with None \n", - "478 gngm Gene Gene interacts_with None \n", - "489 gngm Gene Gene affects causes \n", - "516 gngm Gene Gene interacts_with None \n", - "566 gngm Gene Gene coexists_with None \n", - "591 aapp Gene Gene part_of None \n", - "659 aapp Gene Gene affects causes \n", - "719 gngm Gene Gene coexists_with None \n", - "868 gngm Gene Gene affects causes \n", - "902 aapp Gene Gene produces None \n", - "1174 aapp Gene Gene coexists_with None \n", - "1357 aapp Gene Gene affects causes \n", - "1565 aapp Gene Gene affects causes \n", - "1835 aapp Gene Gene affects causes \n", - "2281 aapp Gene Gene coexists_with None \n", - "2803 aapp Gene Gene produces None \n", - "3246 aapp Gene Gene part_of None \n", - "3476 aapp Gene Gene close_match None \n", - "3790 enzy Gene Gene interacts_with None \n", - "3986 gngm Gene Gene derives_into None \n", - "4174 gngm Gene Gene produces None \n", - "4221 gngm Gene Gene close_match None \n", - "4433 gngm Gene Gene affects causes \n", - "4464 gngm Gene Gene affects causes \n", - "4480 gngm Gene Gene affects causes \n", - "4662 gngm Gene Gene derives_into None \n", - "4713 aapp Gene Gene interacts_with None \n", - "4732 phsu Gene Gene interacts_with None \n", - "4781 gngm Gene Gene affects causes \n", - "4971 aapp Gene Gene interacts_with None \n", - "5005 aapp Gene Gene interacts_with None \n", + "956 umls hops STIMULATES ncbigene \n", + "1632 umls hops INHIBITS ncbigene \n", + "2181 umls hops INTERACTS_WITH ncbigene \n", + "2239 umls hops INTERACTS_WITH ncbigene \n", + "2736 umls hops COEXISTS_WITH ncbigene \n", + "3029 umls hops COEXISTS_WITH ncbigene \n", + "3184 umls hops STIMULATES ncbigene \n", + "4671 umls hops INHIBITS ncbigene \n", + "\n", + " OriginalObject BiolinkSubject BiolinkObject BMPred BMQualPred \\\n", + "956 gngm ChemicalEntity Gene affects causes \n", + "1632 gngm ChemicalEntity Gene affects causes \n", + "2181 gngm ChemicalEntity Gene interacts_with None \n", + "2239 aapp ChemicalEntity Gene interacts_with None \n", + "2736 gngm ChemicalEntity Gene coexists_with None \n", + "3029 aapp ChemicalEntity Gene coexists_with None \n", + "3184 aapp ChemicalEntity Gene affects causes \n", + "4671 aapp ChemicalEntity Gene affects causes \n", "\n", " BMObjAsp BMObjDirect BM_Inv_Pred BM_Inv_QualPred \\\n", - "265 activity_or_abundance increased affected_by caused_by \n", - "336 activity_or_abundance increased affected_by caused_by \n", - "343 None None interacts_with None \n", - "473 None None interacts_with None \n", - "478 None None interacts_with None \n", - "489 activity_or_abundance decreased affected_by caused_by \n", - "516 None None interacts_with None \n", - "566 None None coexists_with None \n", - "591 None None has_part None \n", - "659 activity_or_abundance decreased affected_by caused_by \n", - "719 None None coexists_with None \n", - "868 activity_or_abundance decreased affected_by caused_by \n", - "902 None None produced_by None \n", - "1174 None None coexists_with None \n", - "1357 activity_or_abundance increased affected_by caused_by \n", - "1565 activity_or_abundance increased affected_by caused_by \n", - "1835 activity_or_abundance decreased affected_by caused_by \n", - "2281 None None coexists_with None \n", - "2803 None None produced_by None \n", - "3246 None None has_part None \n", - "3476 None None close_match None \n", - "3790 None None interacts_with None \n", - "3986 None None derives_from None \n", - "4174 None None produced_by None \n", - "4221 None None close_match None \n", - "4433 activity_or_abundance decreased affected_by caused_by \n", - "4464 activity_or_abundance increased affected_by caused_by \n", - "4480 activity_or_abundance increased affected_by caused_by \n", - "4662 None None derives_from None \n", - "4713 None None interacts_with None \n", - "4732 None None interacts_with None \n", - "4781 activity_or_abundance increased affected_by caused_by \n", - "4971 None None interacts_with None \n", - "5005 None None interacts_with None \n", + "956 activity_or_abundance increased affected_by caused_by \n", + "1632 activity_or_abundance decreased affected_by caused_by \n", + "2181 None None interacts_with None \n", + "2239 None None interacts_with None \n", + "2736 None None coexists_with None \n", + "3029 None None coexists_with None \n", + "3184 activity_or_abundance increased affected_by caused_by \n", + "4671 activity_or_abundance decreased affected_by caused_by \n", "\n", " BM_Inv_SubjAsp BM_Inv_SubjDirect \n", - "265 activity_or_abundance increased \n", - "336 activity_or_abundance increased \n", - "343 None None \n", - "473 None None \n", - "478 None None \n", - "489 activity_or_abundance decreased \n", - "516 None None \n", - "566 None None \n", - "591 None None \n", - "659 activity_or_abundance decreased \n", - "719 None None \n", - "868 activity_or_abundance decreased \n", - "902 None None \n", - "1174 None None \n", - "1357 activity_or_abundance increased \n", - "1565 activity_or_abundance increased \n", - "1835 activity_or_abundance decreased \n", - "2281 None None \n", - "2803 None None \n", - "3246 None None \n", - "3476 None None \n", - "3790 None None \n", - "3986 None None \n", - "4174 None None \n", - "4221 None None \n", - "4433 activity_or_abundance decreased \n", - "4464 activity_or_abundance increased \n", - "4480 activity_or_abundance increased \n", - "4662 None None \n", - "4713 None None \n", - "4732 None None \n", - "4781 activity_or_abundance increased \n", - "4971 None None \n", - "5005 None None " + "956 activity_or_abundance increased \n", + "1632 activity_or_abundance decreased \n", + "2181 None None \n", + "2239 None None \n", + "2736 None None \n", + "3029 None None \n", + "3184 activity_or_abundance increased \n", + "4671 activity_or_abundance decreased " ] }, "execution_count": 87, @@ -10218,7 +9550,7 @@ ], "source": [ "## get an example to check on \n", - "final_metatriples[(final_metatriples['SubjectPrefix'] == 'ncbigene') &\n", + "final_metatriples[(final_metatriples['OriginalSubject'] == 'hops') &\n", " (final_metatriples['ObjectPrefix'] == 'ncbigene')]" ] }, @@ -10236,8 +9568,8 @@ "id": "912aa75d", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.222568Z", - "start_time": "2024-04-10T05:27:53.214179Z" + "end_time": "2024-06-12T06:52:55.378568Z", + "start_time": "2024-06-12T06:52:55.370976Z" } }, "outputs": [], @@ -10342,8 +9674,8 @@ "id": "955b36a2", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.245117Z", - "start_time": "2024-04-10T05:27:53.224720Z" + "end_time": "2024-06-12T06:52:55.401637Z", + "start_time": "2024-06-12T06:52:55.380902Z" } }, "outputs": [ @@ -10675,8 +10007,8 @@ "id": "98c5830f", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.252254Z", - "start_time": "2024-04-10T05:27:53.247250Z" + "end_time": "2024-06-12T06:52:55.408599Z", + "start_time": "2024-06-12T06:52:55.403965Z" } }, "outputs": [ @@ -10720,8 +10052,8 @@ "id": "b251cb75", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.258704Z", - "start_time": "2024-04-10T05:27:53.254173Z" + "end_time": "2024-06-12T06:52:55.415533Z", + "start_time": "2024-06-12T06:52:55.410838Z" } }, "outputs": [ @@ -10765,8 +10097,8 @@ "id": "586ebf88", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.265554Z", - "start_time": "2024-04-10T05:27:53.260941Z" + "end_time": "2024-06-12T06:52:55.422290Z", + "start_time": "2024-06-12T06:52:55.417612Z" } }, "outputs": [ @@ -10813,8 +10145,8 @@ "id": "a105373c", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.272041Z", - "start_time": "2024-04-10T05:27:53.267502Z" + "end_time": "2024-06-12T06:52:55.430308Z", + "start_time": "2024-06-12T06:52:55.424972Z" } }, "outputs": [ @@ -10869,8 +10201,8 @@ "id": "db9f9f81", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.281533Z", - "start_time": "2024-04-10T05:27:53.274307Z" + "end_time": "2024-06-12T06:52:55.441147Z", + "start_time": "2024-06-12T06:52:55.432814Z" } }, "outputs": [], @@ -10943,8 +10275,8 @@ "id": "3856781d", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.336511Z", - "start_time": "2024-04-10T05:27:53.283690Z" + "end_time": "2024-06-12T06:53:11.563011Z", + "start_time": "2024-06-12T06:53:11.509804Z" } }, "outputs": [], @@ -10958,15 +10290,15 @@ "id": "fdcd4202", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.342608Z", - "start_time": "2024-04-10T05:27:53.338996Z" + "end_time": "2024-06-12T06:53:13.139551Z", + "start_time": "2024-06-12T06:53:13.135627Z" } }, "outputs": [ { "data": { "text/plain": [ - "4767" + "5113" ] }, "execution_count": 96, @@ -10984,8 +10316,8 @@ "id": "5495d772", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.349452Z", - "start_time": "2024-04-10T05:27:53.344807Z" + "end_time": "2024-06-12T06:54:16.946870Z", + "start_time": "2024-06-12T06:54:16.941942Z" } }, "outputs": [ @@ -11027,12 +10359,12 @@ }, { "cell_type": "code", - "execution_count": 98, + "execution_count": 99, "id": "84637c6f", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:27:53.357762Z", - "start_time": "2024-04-10T05:27:53.351537Z" + "end_time": "2024-06-12T06:54:52.054089Z", + "start_time": "2024-06-12T06:54:52.049287Z" } }, "outputs": [ @@ -11040,7 +10372,7 @@ "name": "stdout", "output_type": "stream", "text": [ - "sbst-CAUSES-patf\n", + "hops-CAUSES-neop\n", "[{'supportBatch': True,\n", " 'useTemplating': True,\n", " 'inputs': [{'id': 'UMLS', 'semantic': 'ChemicalEntity'}],\n", @@ -11048,9 +10380,9 @@ " 'parameters': {'fields': 'object.umls,predication.pmid,predication.sentence,subject.name,object.name',\n", " 'size': 1000,\n", " 'filter': 'predicate:CAUSES AND '\n", - " 'object.semantic_type_abbreviation:patf AND '\n", + " 'object.semantic_type_abbreviation:neop AND '\n", " '_exists_:object.umls AND pmid_count:>3'},\n", - " 'outputs': [{'id': 'UMLS', 'semantic': 'PathologicalProcess'}],\n", + " 'outputs': [{'id': 'UMLS', 'semantic': 'Disease'}],\n", " 'predicate': 'causes',\n", " 'source': 'infores:semmeddb',\n", " 'knowledge_level': 'not_provided',\n", @@ -11060,9 +10392,9 @@ } ], "source": [ - "## double-check qualifier + rev operation is written properly?\n", + "## double-check specific semantic type is written properly?\n", "for i in kgs_operations['x-bte-kgs-operations'].keys():\n", - " if ('sbst' in i):\n", + " if ('hops' in i):\n", " print(i)\n", " pprint.pprint(kgs_operations['x-bte-kgs-operations'][i], sort_dicts = False)\n", " break" @@ -11083,12 +10415,12 @@ }, { "cell_type": "code", - "execution_count": 99, + "execution_count": 100, "id": "239dce9d", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:28:18.839746Z", - "start_time": "2024-04-10T05:28:03.290117Z" + "end_time": "2024-06-12T06:55:33.567237Z", + "start_time": "2024-06-12T06:55:17.353866Z" } }, "outputs": [], @@ -11109,12 +10441,12 @@ }, { "cell_type": "code", - "execution_count": 100, + "execution_count": 101, "id": "27403608", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:29:00.268747Z", - "start_time": "2024-04-10T05:29:00.265536Z" + "end_time": "2024-06-12T06:56:56.720256Z", + "start_time": "2024-06-12T06:56:56.716821Z" } }, "outputs": [], @@ -11129,12 +10461,12 @@ }, { "cell_type": "code", - "execution_count": 101, + "execution_count": 102, "id": "4bec97ed", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:29:00.957978Z", - "start_time": "2024-04-10T05:29:00.953912Z" + "end_time": "2024-06-12T06:56:57.979220Z", + "start_time": "2024-06-12T06:56:57.974902Z" } }, "outputs": [], @@ -11144,12 +10476,12 @@ }, { "cell_type": "code", - "execution_count": 102, + "execution_count": 103, "id": "e64c34db", "metadata": { "ExecuteTime": { - "end_time": "2024-04-10T05:29:02.561023Z", - "start_time": "2024-04-10T05:29:01.555604Z" + "end_time": "2024-06-12T06:57:00.029441Z", + "start_time": "2024-06-12T06:56:59.060139Z" } }, "outputs": [], diff --git a/semmeddb/generated_list.yaml b/semmeddb/generated_list.yaml index 868db876..5123a46f 100644 --- a/semmeddb/generated_list.yaml +++ b/semmeddb/generated_list.yaml @@ -49,6 +49,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-aapp' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-orch' +- $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-celc' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-celc-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-topp' @@ -77,6 +78,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-aapp' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-bacs' +- $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/dsyn-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-celf' @@ -251,6 +253,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_umls-INTERACTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-ortf' +- $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-gngm' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/patf-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/patf-CAUSES-dsyn-rev' @@ -309,9 +312,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-inch' - $ref: '#/components/x-bte-kgs-operations/topp-USES-lipd' +- $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-gngm' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-orch' +- $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-celf' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/emst-LOCATION_OF-aapp-rev' @@ -413,6 +419,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-blor_umls-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-virs-rev' +- $ref: '#/components/x-bte-kgs-operations/nsba-PART_OF-bpoc' - $ref: '#/components/x-bte-kgs-operations/nsba-PART_OF-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-celf' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-celf-rev' @@ -493,6 +500,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/neop-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-acab' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-acab-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/comd-COEXISTS_WITH-neop-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bact' @@ -507,6 +515,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bacs-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-aapp_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-aapp_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-STIMULATES-gngm_ncbigene-rev' @@ -517,6 +526,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-lipd' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-fndg' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-fndg-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-COEXISTS_WITH-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-lipd' @@ -544,6 +554,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/celc-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-bacs' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-bacs' +- $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/orch_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/orch_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-virs' @@ -565,6 +578,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/celf-PROCESS_OF-bact' - $ref: '#/components/x-bte-kgs-operations/celf-PROCESS_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-orch' +- $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-bact_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-bact_umls-rev' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-cell' @@ -577,6 +591,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-orgf-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-celf' - $ref: '#/components/x-bte-kgs-operations/food-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/food-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/neop-CAUSES-dsyn-rev' @@ -620,11 +635,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/horm-INTERACTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-ortf' +- $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-dsyn' - $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-ortf' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/phsu-INTERACTS_WITH-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-inch' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-COEXISTS_WITH-inpo' @@ -667,6 +685,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/inpo-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/inpo-CAUSES-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-bacs' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-TREATS-inpo' - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-gngm-rev' @@ -677,7 +696,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/diap-DIAGNOSES-cgab' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-celf' - $ref: '#/components/x-bte-kgs-operations/aapp-CAUSES-inpo' +- $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-bact' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-bact-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-bacs' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-dsyn-rev' @@ -694,7 +715,10 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-moft_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-moft_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-celf' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-celf-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-bacs' +- $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-bsoj' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-bsoj-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bacs_umls' @@ -707,6 +731,8 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-strd' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-cell' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-cell-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-orch' +- $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-dsyn' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-gngm-rev' @@ -719,6 +745,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/hops-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/cell_umls-LOCATION_OF-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-neop' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-ortf' - $ref: '#/components/x-bte-kgs-operations/orch-CAUSES-comd' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-carb' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-orch' @@ -733,17 +760,20 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-bact' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-bact-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-phsu' +- $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-phsu-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-cell' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-cell-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-TREATS-virs' - $ref: '#/components/x-bte-kgs-operations/phsu-TREATS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-bact_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-inpo' - $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-PRECEDES-orgf' - $ref: '#/components/x-bte-kgs-operations/orgf-PRECEDES-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-ASSOCIATED_WITH-fndg' - $ref: '#/components/x-bte-kgs-operations/bdsu-ASSOCIATED_WITH-fndg-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-celc' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-celc-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-celf' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-celf-rev' @@ -751,11 +781,15 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-LOCATION_OF-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-bacs_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-orch' +- $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-orch-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-comd' - $ref: '#/components/x-bte-kgs-operations/sosy-PROCESS_OF-aggp' - $ref: '#/components/x-bte-kgs-operations/sosy-PROCESS_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-virs-rev' +- $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-moft' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-dsyn' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-dsyn-rev' @@ -789,10 +823,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bsoj' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bsoj-rev' +- $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-moft' - $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-moft-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs_umls-INHIBITS-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/bact-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/bact-PRODUCES-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-orgf' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-orga' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-orga-rev' - $ref: '#/components/x-bte-kgs-operations/orch-PREVENTS-patf' @@ -818,6 +855,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/hops-ASSOCIATED_WITH-neop-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PREVENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-bacs' +- $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-diap' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-diap-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-neop' @@ -841,6 +879,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/fndg-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-celf' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-celf-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-gngm-rev' @@ -884,6 +923,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-celf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-bact' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-bact-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-orch' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-gngm_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-gngm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-gngm-rev' @@ -900,6 +940,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bacs_ncbigene-PART_OF-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/aapp-ASSOCIATED_WITH-sosy-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/inch-CAUSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-moft' @@ -917,6 +958,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-ortf' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-celc' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-celc-rev' +- $ref: '#/components/x-bte-kgs-operations/nnon-ADMINISTERED_TO-cell' - $ref: '#/components/x-bte-kgs-operations/nnon-ADMINISTERED_TO-cell-rev' - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-sosy' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-aapp' @@ -928,6 +970,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/antb-CAUSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-horm' +- $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-tisu' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-aapp' @@ -949,6 +992,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-TREATS-dsyn_umls' - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-TREATS-dsyn_umls-rev' - $ref: '#/components/x-bte-kgs-operations/cgab-COEXISTS_WITH-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-aapp' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-aapp-rev' @@ -959,6 +1003,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-strd' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-bacs' +- $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-neop_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-neop_umls-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-PROCESS_OF-aggp' @@ -968,6 +1013,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orch-PREVENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/topp-TREATS-virs' - $ref: '#/components/x-bte-kgs-operations/topp-TREATS-virs-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-moft' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/tisu-PRODUCES-aapp-rev' @@ -996,6 +1042,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/dsyn-ASSOCIATED_WITH-moft-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-ASSOCIATED_WITH-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-ortf' +- $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-neop' - $ref: '#/components/x-bte-kgs-operations/cgab-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-gngm-rev' @@ -1030,11 +1077,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-ASSOCIATED_WITH-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-gngm' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-gngm-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-cell' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-orch' +- $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-inch' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-patf' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-COMPLICATES-dsyn' - $ref: '#/components/x-bte-kgs-operations/dsyn-COMPLICATES-dsyn-rev' @@ -1043,11 +1093,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-tisu_umls' - $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-COEXISTS_WITH-phsf' +- $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/horm_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-ASSOCIATED_WITH-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-INTERACTS_WITH-gngm_ncbigene' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-ortf' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-ortf-rev' +- $ref: '#/components/x-bte-kgs-operations/phsu-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/horm-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/moft-AFFECTS-orgf' @@ -1116,8 +1169,11 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-cgab' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-phsu' +- $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/hops-INTERACTS_WITH-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-bsoj' - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-bsoj-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-ortf_umls' @@ -1130,6 +1186,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-bdsu' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-tisu' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-gngm' @@ -1142,9 +1199,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-patf' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-phsf' +- $ref: '#/components/x-bte-kgs-operations/orch-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/phsu-TREATS-acab' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-inpo' +- $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-neop' - $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-ASSOCIATED_WITH-patf_umls-rev' @@ -1179,6 +1239,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-phsu-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/antb-INTERACTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/antb-INTERACTS_WITH-antb-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-PRECEDES-mobd' @@ -1186,6 +1247,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/virs-COEXISTS_WITH-virs-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-eico' - $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-bpoc-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-sosy' - $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-bacs-rev' @@ -1200,7 +1262,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-irda' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-acab' +- $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-phsu' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-orch' +- $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-emst' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-phsf' - $ref: '#/components/x-bte-kgs-operations/phsu-INHIBITS-bacs-rev' @@ -1208,6 +1272,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-nsba' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-orch' +- $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PRECEDES-neop' - $ref: '#/components/x-bte-kgs-operations/neop-PRECEDES-neop-rev' @@ -1229,6 +1294,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/elii-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-dsyn-rev' @@ -1256,6 +1322,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/food-PREDISPOSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/food-PREDISPOSES-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-inch' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-orgf_umls' - $ref: '#/components/x-bte-kgs-operations/mobd-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/mobd-AFFECTS-mobd-rev' @@ -1265,6 +1332,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-nusq' - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/strd-TREATS-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/orch_umls-INTERACTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/orch_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-bpoc_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-bpoc_umls-rev' @@ -1287,12 +1355,16 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/emst-PART_OF-cell' - $ref: '#/components/x-bte-kgs-operations/emst-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-bacs' +- $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd-STIMULATES-aapp' - $ref: '#/components/x-bte-kgs-operations/lipd-STIMULATES-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-elii-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-emod' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-emod-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-AUGMENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/dsyn-AUGMENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-acab' +- $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-bacs_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-bacs_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-tisu' @@ -1333,6 +1405,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-orch' +- $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-bacs_umls-rev' @@ -1345,15 +1418,18 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/mobd-OCCURS_IN-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/hops_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-antb' +- $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-cell' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/medd-TREATS-mobd' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-bact' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-bact-rev' - $ref: '#/components/x-bte-kgs-operations/cell-INTERACTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/cell-INTERACTS_WITH-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-dsyn' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/orch_umls-INTERACTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/dora-TREATS-sosy' - $ref: '#/components/x-bte-kgs-operations/dora-TREATS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/antb-COEXISTS_WITH-antb' @@ -1365,6 +1441,8 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/inch-AUGMENTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-moft' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-moft-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-COEXISTS_WITH-hops' +- $ref: '#/components/x-bte-kgs-operations/hops-COEXISTS_WITH-hops-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-orgf_umls' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-bacs-rev' @@ -1375,6 +1453,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/ortf-AFFECTS-orga-rev' - $ref: '#/components/x-bte-kgs-operations/hops-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-horm_umls' +- $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-horm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-DISRUPTS-cell' - $ref: '#/components/x-bte-kgs-operations/dsyn-DISRUPTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-bacs' @@ -1390,11 +1469,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-ortf' - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-horm_umls' +- $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-horm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/antb-DISRUPTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bacs' +- $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu_umls-LOCATION_OF-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-patf_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-patf_umls-rev' @@ -1404,6 +1485,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/neop_umls-PRODUCES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/neop_umls-PRODUCES-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-aapp' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-ASSOCIATED_WITH-comd' - $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-bacs' @@ -1416,6 +1498,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-acab' - $ref: '#/components/x-bte-kgs-operations/mobd-AFFECTS-orgf-rev' +- $ref: '#/components/x-bte-kgs-operations/nsba-ASSOCIATED_WITH-mobd' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-orga-rev' @@ -1432,6 +1515,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/medd-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/medd-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-orch_umls' +- $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-orch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/mobd-MANIFESTATION_OF-dsyn' - $ref: '#/components/x-bte-kgs-operations/mobd-MANIFESTATION_OF-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-aapp' @@ -1504,19 +1588,23 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/nsba-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-moft' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-moft-rev' +- $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-patf' - $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-inch' - $ref: '#/components/x-bte-kgs-operations/nsba-INTERACTS_WITH-nsba-rev' +- $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/horm-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-phsu' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/elii-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-nsba' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-gngm' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-CAUSES-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd-COEXISTS_WITH-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AUGMENTS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-gngm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-CAUSES-dsyn-rev' @@ -1531,8 +1619,11 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/inch-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/comd-COEXISTS_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-elii' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-orch' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-ASSOCIATED_WITH-mobd_umls' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-tisu' +- $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/celc_umls-LOCATION_OF-gngm_ncbigene' @@ -1544,12 +1635,15 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-neop-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-inpo' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-ortf' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/diap-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-comd' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-nsba' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-orch' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CAUSES-mobd' - $ref: '#/components/x-bte-kgs-operations/antb-PREVENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-patf' @@ -1562,20 +1656,25 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-cgab' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-neop' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-imft' - $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/phsf-AFFECTS-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-INTERACTS_WITH-hops' +- $ref: '#/components/x-bte-kgs-operations/horm-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-CAUSES-sosy' - $ref: '#/components/x-bte-kgs-operations/sosy-CAUSES-sosy-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-horm' - $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-orch' - $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-anab' - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-anab-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-bpoc-rev' @@ -1589,12 +1688,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-dsyn_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-dsyn_umls-rev' - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-bacs' +- $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-PROCESS_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-celc' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-celc-rev' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-comd' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-biof' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-biof-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-phsf' - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-horm-rev' @@ -1613,6 +1714,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-celc_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-celc_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-tisu' +- $ref: '#/components/x-bte-kgs-operations/hops-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-comd' - $ref: '#/components/x-bte-kgs-operations/phsu-INHIBITS-aapp-rev' @@ -1628,6 +1730,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/dora-TREATS-patf' - $ref: '#/components/x-bte-kgs-operations/dora-TREATS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-aapp' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-phsu' @@ -1636,10 +1739,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bact_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bact_umls-rev' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-horm' +- $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/nsba_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-bacs' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-ASSOCIATED_WITH-sosy-rev' @@ -1653,16 +1758,17 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-bacs_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-dsyn' -- $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-phsf' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-COEXISTS_WITH-aapp_ncbigene' +- $ref: '#/components/x-bte-kgs-operations/lipd-INTERACTS_WITH-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/comd-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/comd-PRODUCES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/neop-COEXISTS_WITH-celf' - $ref: '#/components/x-bte-kgs-operations/neop-COEXISTS_WITH-celf-rev' +- $ref: '#/components/x-bte-kgs-operations/orch_umls-COEXISTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/orch_umls-COEXISTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-patf-rev' @@ -1673,6 +1779,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/dsyn-DISRUPTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-neop' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-neop-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-comd' - $ref: '#/components/x-bte-kgs-operations/carb-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-orch' @@ -1681,11 +1788,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/inch-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-elii' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-celc' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-eico' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/elii-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-horm' +- $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_umls-INTERACTS_WITH-aapp_ncbigene-rev' @@ -1695,7 +1804,6 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orch-PREVENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-aapp' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-aapp-rev' -- $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/nnon-AUGMENTS-bpoc-rev' @@ -1728,15 +1836,20 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/medd-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-imft' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-carb' +- $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-carb-rev' - $ref: '#/components/x-bte-kgs-operations/opco-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/anab-PART_OF-neop' - $ref: '#/components/x-bte-kgs-operations/anab-PART_OF-neop-rev' +- $ref: '#/components/x-bte-kgs-operations/nnon-INTERACTS_WITH-nnon' +- $ref: '#/components/x-bte-kgs-operations/nnon-INTERACTS_WITH-nnon-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-bacs' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-lipd' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-tisu' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-horm' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-imft' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-imft-rev' @@ -1746,9 +1859,15 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/antb_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/phsu-INHIBITS-horm' +- $ref: '#/components/x-bte-kgs-operations/phsu-INHIBITS-horm-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-nsba' +- $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-nsba-rev' - $ref: '#/components/x-bte-kgs-operations/dora-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/phsf-AFFECTS-orga-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-patf' - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/nsba-STIMULATES-nsba-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-cell' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-inch' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-biof-rev' @@ -1772,25 +1891,30 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-acab' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-patf' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/bpoc-PART_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/bpoc-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-bacs' +- $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/orch-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-virs' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-virs-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/acab-COEXISTS_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-PRODUCES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-PRODUCES-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-carb' +- $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/biof-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/biof-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/inbe-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/cgab-PART_OF-aggp' - $ref: '#/components/x-bte-kgs-operations/cgab-PART_OF-aggp-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-nsba' - $ref: '#/components/x-bte-kgs-operations/diap-DIAGNOSES-comd' - $ref: '#/components/x-bte-kgs-operations/lipd-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/inch-AUGMENTS-cell-rev' @@ -1801,11 +1925,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/patf-ASSOCIATED_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/patf-ASSOCIATED_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/hops-DISRUPTS-moft-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-biof' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/acab-AFFECTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-CAUSES-orgf' - $ref: '#/components/x-bte-kgs-operations/ortf-CAUSES-orgf-rev' +- $ref: '#/components/x-bte-kgs-operations/carb-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-celc' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-celc-rev' @@ -1816,6 +1942,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-hops' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-CAUSES-comd_umls' +- $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-eico' - $ref: '#/components/x-bte-kgs-operations/antb-TREATS-sosy-rev' @@ -1838,6 +1965,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-sosy' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-sosy-rev' +- $ref: '#/components/x-bte-kgs-operations/carb-COEXISTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/nsba-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-inch' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-nusq-rev' @@ -1875,8 +2003,10 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-bpoc-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-inch' - $ref: '#/components/x-bte-kgs-operations/nsba-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-orch' +- $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-eico' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-biof_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-biof_umls-rev' @@ -1889,11 +2019,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bpoc-PART_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/bact-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-phsu' +- $ref: '#/components/x-bte-kgs-operations/antb-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-nnon' - $ref: '#/components/x-bte-kgs-operations/carb-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-tisu' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-tisu-rev' - $ref: '#/components/x-bte-kgs-operations/elii-INHIBITS-elii' +- $ref: '#/components/x-bte-kgs-operations/elii-INHIBITS-elii-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-nnon' - $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/inch-INHIBITS-bacs-rev' @@ -1908,6 +2040,8 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-biof' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-biof-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-orch' +- $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/dora-PREVENTS-sosy' - $ref: '#/components/x-bte-kgs-operations/dora-PREVENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/imft-PREVENTS-virs' @@ -1923,10 +2057,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/blor-LOCATION_OF-biof-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/antb_umls-STIMULATES-gngm_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-mobd' +- $ref: '#/components/x-bte-kgs-operations/nsba-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-inch' +- $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/neop-MANIFESTATION_OF-neop' - $ref: '#/components/x-bte-kgs-operations/neop-MANIFESTATION_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-inch_umls' +- $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-inch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/horm_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-bacs' @@ -1939,6 +2077,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-patf' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-phsu' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-nusq' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-comd' @@ -1960,16 +2099,19 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/eico-INTERACTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/eico_umls-STIMULATES-gngm_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-elii' - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-inch' - $ref: '#/components/x-bte-kgs-operations/nsba-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-PRECEDES-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-comd' +- $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-dsyn' - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/hops-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/topp-PREVENTS-virs' - $ref: '#/components/x-bte-kgs-operations/topp-PREVENTS-virs-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-irda' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-lipd' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-dsyn' @@ -1978,6 +2120,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/emst-LOCATION_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-elii' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-COEXISTS_WITH-aapp_ncbigene' +- $ref: '#/components/x-bte-kgs-operations/antb-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/imft_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/imft_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/hops-ASSOCIATED_WITH-sosy-rev' @@ -1990,10 +2133,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-bodm' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-elii' +- $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-inpo' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-cell' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-ASSOCIATED_WITH-inpo_umls' - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/inch-INHIBITS-inch-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-PROCESS_OF-emod-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-tisu_umls' - $ref: '#/components/x-bte-kgs-operations/dsyn-PRECEDES-comd' @@ -2006,6 +2151,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-eico' - $ref: '#/components/x-bte-kgs-operations/hops_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-PART_OF-bact-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-hops' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-lipd' @@ -2049,11 +2195,16 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-celc_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-comd' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-comd' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-comd-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/anab-COEXISTS_WITH-anab' - $ref: '#/components/x-bte-kgs-operations/anab-COEXISTS_WITH-anab-rev' +- $ref: '#/components/x-bte-kgs-operations/eico-INTERACTS_WITH-eico' +- $ref: '#/components/x-bte-kgs-operations/eico-INTERACTS_WITH-eico-rev' +- $ref: '#/components/x-bte-kgs-operations/horm-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AUGMENTS-celc_umls-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/tisu_umls-PRODUCES-aapp_ncbigene-rev' @@ -2067,6 +2218,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-anst' - $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-anst-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-dsyn' +- $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-patf' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-plnt' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-plnt-rev' @@ -2087,6 +2239,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-nsba' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-anab' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-anab-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-phsu' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-bodm' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/bact-CAUSES-orgf' @@ -2096,6 +2249,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/lipd-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/eico-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/hops-AFFECTS-cell-rev' +- $ref: '#/components/x-bte-kgs-operations/inch-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/inch-ASSOCIATED_WITH-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-phsf_umls' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-phsf' @@ -2105,10 +2259,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PRODUCES-horm' +- $ref: '#/components/x-bte-kgs-operations/neop-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-cell_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AFFECTS-cell-rev' -- $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-inpo' +- $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-inch' +- $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-inch-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-COEXISTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-inpo' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-carb' @@ -2141,11 +2297,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/lipd-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-bacs' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd_umls-STIMULATES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/antb-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-PRODUCES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-PRODUCES-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-phsu_umls' +- $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-phsu_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-bodm' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-celc-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-ASSOCIATED_WITH-sosy' @@ -2169,10 +2328,10 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/topp-ADMINISTERED_TO-aggp' - $ref: '#/components/x-bte-kgs-operations/topp-ADMINISTERED_TO-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-orch' -- $ref: '#/components/x-bte-kgs-operations/sbst-AFFECTS-moft' - $ref: '#/components/x-bte-kgs-operations/sbst-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-cell' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-cell-rev' +- $ref: '#/components/x-bte-kgs-operations/nsba-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/cgab-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/diap-DIAGNOSES-emod' - $ref: '#/components/x-bte-kgs-operations/diap-DIAGNOSES-emod-rev' @@ -2188,6 +2347,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/orch-PREVENTS-acab' - $ref: '#/components/x-bte-kgs-operations/phsu-DISRUPTS-cell-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-elii' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-lipd_umls' - $ref: '#/components/x-bte-kgs-operations/mobd-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-fndg-rev' @@ -2195,12 +2355,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INTERACTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INTERACTS_WITH-aapp_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/nsba_umls-COEXISTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/nsba_umls-COEXISTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-bpoc' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-neop_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-neop_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/inch-STIMULATES-inch-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-COEXISTS_WITH-emod' - $ref: '#/components/x-bte-kgs-operations/inpo-COEXISTS_WITH-emod-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-tisu_umls' @@ -2208,8 +2370,10 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/strd-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/opco-CAUSES-inpo-rev' +- $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-nsba-rev' - $ref: '#/components/x-bte-kgs-operations/inch-CAUSES-phsf-rev' - $ref: '#/components/x-bte-kgs-operations/cell_umls-INTERACTS_WITH-aapp_ncbigene' +- $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-STIMULATES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-inpo_umls' @@ -2233,8 +2397,10 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-sosy' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-orch' +- $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-nsba' +- $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-patf' - $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-orch' @@ -2245,9 +2411,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/eico-AFFECTS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/mobd-COEXISTS_WITH-emod' - $ref: '#/components/x-bte-kgs-operations/mobd-COEXISTS_WITH-emod-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-celc' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-MANIFESTATION_OF-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-celf' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-inch' +- $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-comd' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-CAUSES-phsf_umls' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-nsba' @@ -2265,12 +2434,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-nsba' - $ref: '#/components/x-bte-kgs-operations/opco-INHIBITS-gngm-rev' +- $ref: '#/components/x-bte-kgs-operations/nsba-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/nsba-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/dora-PREVENTS-patf' - $ref: '#/components/x-bte-kgs-operations/dora-PREVENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AUGMENTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/nsba_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-antb_umls' +- $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-moft_umls-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AFFECTS-celc-rev' @@ -2284,11 +2455,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-ASSOCIATED_WITH-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/inch-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-fndg' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/eico-AUGMENTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/lipd_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-mobd' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-lipd' - $ref: '#/components/x-bte-kgs-operations/nsba-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-aapp-rev' @@ -2304,20 +2477,26 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/inch-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-neop' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-neop-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-nsba' - $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-nsba-rev' - $ref: '#/components/x-bte-kgs-operations/antb_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-celf' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-celf-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-bacs' +- $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-PART_OF-aggp' - $ref: '#/components/x-bte-kgs-operations/bdsu-PART_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CONVERTS_TO-orch' +- $ref: '#/components/x-bte-kgs-operations/aapp-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/cgab-COEXISTS_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PREDISPOSES-sosy' - $ref: '#/components/x-bte-kgs-operations/topp-PREDISPOSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/antb-INHIBITS-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-neop' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-horm' +- $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/comd-PROCESS_OF-emod-rev' - $ref: '#/components/x-bte-kgs-operations/carb-TREATS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-horm' @@ -2327,7 +2506,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/hops-AUGMENTS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-mobd' +- $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-strd' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AUGMENTS-neop_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-PART_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/nusq-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-PROCESS_OF-emod-rev' @@ -2341,6 +2522,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-PREVENTS-acab' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-nusq' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-nusq-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-carb' - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-moft' - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-moft-rev' @@ -2359,6 +2541,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bact-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/lipd_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-orch' +- $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-orch-rev' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/carb_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-ortf' @@ -2376,11 +2559,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-biof' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CAUSES-cgab_umls' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-comd' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/hops-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-neop' - $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-horm_umls' +- $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-horm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/elii_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-inpo' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-carb' @@ -2392,11 +2577,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-orch_umls' +- $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-orch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PREDISPOSES-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-OCCURS_IN-aggp' - $ref: '#/components/x-bte-kgs-operations/orgf-OCCURS_IN-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-lipd' +- $ref: '#/components/x-bte-kgs-operations/strd-INTERACTS_WITH-horm-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs_umls-INHIBITS-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/lbtr-COEXISTS_WITH-lbtr' - $ref: '#/components/x-bte-kgs-operations/lbtr-COEXISTS_WITH-lbtr-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-antb' @@ -2424,6 +2612,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-patf_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-DISRUPTS-celf-rev' +- $ref: '#/components/x-bte-kgs-operations/horm-DISRUPTS-ortf' - $ref: '#/components/x-bte-kgs-operations/antb-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-patf_umls' - $ref: '#/components/x-bte-kgs-operations/phsu-INTERACTS_WITH-gngm-rev' @@ -2434,16 +2623,19 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-inch_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PREDISPOSES-inpo_umls' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-inpo' +- $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-lipd' - $ref: '#/components/x-bte-kgs-operations/antb-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/mobd-PRECEDES-mobd-rev' - $ref: '#/components/x-bte-kgs-operations/biof-AFFECTS-neop' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-moft' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-horm_umls' +- $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-horm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AUGMENTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/food-CAUSES-inpo' - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-phsu' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-mobd-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-cell' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-cell-rev' @@ -2467,21 +2659,25 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/lipd-AFFECTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-antb' +- $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-acab' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-emst_umls' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-comd' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-bacs' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/strd-COEXISTS_WITH-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-neop' - $ref: '#/components/x-bte-kgs-operations/nnon-DISRUPTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-anst' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-strd' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-horm' - $ref: '#/components/x-bte-kgs-operations/horm-CONVERTS_TO-horm' - $ref: '#/components/x-bte-kgs-operations/horm-CONVERTS_TO-horm-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-inch' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-bacs' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-orch_umls' +- $ref: '#/components/x-bte-kgs-operations/emst-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/hops_umls-INTERACTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-rcpt-rev' @@ -2491,7 +2687,6 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/carb-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-tisu' -- $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-comd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-lipd_umls' - $ref: '#/components/x-bte-kgs-operations/emst-PART_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-ASSOCIATED_WITH-bact' @@ -2506,6 +2701,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-nusq_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-TREATS-patf' - $ref: '#/components/x-bte-kgs-operations/aapp-TREATS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/nsba-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-imft_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-imft_umls-rev' - $ref: '#/components/x-bte-kgs-operations/horm-PREDISPOSES-patf-rev' @@ -2525,6 +2721,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-celc' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/biof-AFFECTS-ortf' +- $ref: '#/components/x-bte-kgs-operations/lipd-STIMULATES-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/eico-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-fngs-rev' @@ -2536,9 +2733,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-lipd' +- $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-sosy-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-inch' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-hops' - $ref: '#/components/x-bte-kgs-operations/moft_umls-AFFECTS-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-mobd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-irda_umls' @@ -2546,10 +2746,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/acab-PART_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-PREDISPOSES-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-carb' - $ref: '#/components/x-bte-kgs-operations/hops-AFFECTS-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-phsf' - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-gngm' - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-gngm-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/inch-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-imft' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-imft-rev' @@ -2566,6 +2768,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-eico' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-phsu' - $ref: '#/components/x-bte-kgs-operations/opco-TREATS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-fndg-rev' @@ -2588,12 +2791,15 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AUGMENTS-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-acab' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-celc-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-tisu' - $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-celc-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-orgf' - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-eico' +- $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-eico-rev' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-biof' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-celc-rev' @@ -2606,6 +2812,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-phsu' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-comd' +- $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/lbtr-COEXISTS_WITH-sosy' @@ -2621,8 +2828,10 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/strd-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AUGMENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-celc-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-DISRUPTS-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CAUSES-sosy' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-strd' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-orgf' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-patf_umls-rev' @@ -2630,13 +2839,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/emst-LOCATION_OF-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-INHIBITS-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INHIBITS-orch_umls' +- $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INHIBITS-orch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-gngm' - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_umls-COEXISTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/horm-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-emod-rev' -- $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-mobd' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-fngs' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/anab-OCCURS_IN-aggp' @@ -2655,13 +2864,16 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bact_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-same_as-aapp' - $ref: '#/components/x-bte-kgs-operations/aapp-same_as-aapp-rev' +- $ref: '#/components/x-bte-kgs-operations/elii-ASSOCIATED_WITH-comd' - $ref: '#/components/x-bte-kgs-operations/strd-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-elii' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-eico' - $ref: '#/components/x-bte-kgs-operations/neop-COMPLICATES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/virs-CAUSES-ortf' - $ref: '#/components/x-bte-kgs-operations/virs-CAUSES-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/nusq-CAUSES-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-celf' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-celf-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-ASSOCIATED_WITH-neop' - $ref: '#/components/x-bte-kgs-operations/rcpt-ASSOCIATED_WITH-neop-rev' @@ -2674,11 +2886,11 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/virs-CAUSES-comd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-acab_umls' - $ref: '#/components/x-bte-kgs-operations/ortf-AFFECTS-biof-rev' -- $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/rcpt-INHIBITS-gngm' - $ref: '#/components/x-bte-kgs-operations/rcpt-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/dora-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/neop-AFFECTS-biof-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-acab' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-nsba' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-aapp' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-aapp-rev' @@ -2696,9 +2908,11 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/dsyn-MANIFESTATION_OF-orgf' - $ref: '#/components/x-bte-kgs-operations/dsyn-MANIFESTATION_OF-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-phsu' +- $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-phsu-rev' - $ref: '#/components/x-bte-kgs-operations/eico-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-orgf' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/antb-INHIBITS-antb-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-antb' - $ref: '#/components/x-bte-kgs-operations/phsu-DISRUPTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-biof-rev' @@ -2724,12 +2938,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/fngs-INTERACTS_WITH-bact-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-orch' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-eico' +- $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-elii' - $ref: '#/components/x-bte-kgs-operations/elii_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/antb-DISRUPTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-DISRUPTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/inpo-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-TREATS-patf_umls' - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-TREATS-patf_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/carb-CONVERTS_TO-carb' - $ref: '#/components/x-bte-kgs-operations/carb-CONVERTS_TO-carb-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-patf-rev' @@ -2758,6 +2974,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-COEXISTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-COEXISTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-orch' +- $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-emst' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-aggp' @@ -2780,7 +2997,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/sosy-DIAGNOSES-anab-rev' - $ref: '#/components/x-bte-kgs-operations/food-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/food-ASSOCIATED_WITH-inpo-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-bpoc-rev' +- $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-MANIFESTATION_OF-patf' - $ref: '#/components/x-bte-kgs-operations/sosy-MANIFESTATION_OF-patf-rev' @@ -2797,26 +3016,33 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-ADMINISTERED_TO-cell' - $ref: '#/components/x-bte-kgs-operations/gngm-ADMINISTERED_TO-cell-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-emst' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-antb' +- $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-neop' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-celf' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-rcpt_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-rcpt_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CONVERTS_TO-elii' +- $ref: '#/components/x-bte-kgs-operations/carb-INHIBITS-carb-rev' - $ref: '#/components/x-bte-kgs-operations/comd-OCCURS_IN-neop' - $ref: '#/components/x-bte-kgs-operations/comd-OCCURS_IN-neop-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-neop_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-neop_umls-rev' - $ref: '#/components/x-bte-kgs-operations/biof-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/biof-PRODUCES-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-orch-rev' - $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-cell-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/hops-PREDISPOSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-PART_OF-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-PART_OF-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/comd-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-orch' +- $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-orch-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-nsba' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/inch_umls-COEXISTS_WITH-gngm_ncbigene-rev' @@ -2837,6 +3063,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-hops' - $ref: '#/components/x-bte-kgs-operations/cgab-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/cgab-LOCATION_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/fngs_umls-LOCATION_OF-gngm_ncbigene' @@ -2862,7 +3089,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/carb_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-mobd_umls' - $ref: '#/components/x-bte-kgs-operations/phsf-PRODUCES-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-acab' - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-emst' - $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-moft' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-moft-rev' @@ -2872,6 +3101,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-carb' +- $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-carb-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-eico' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-fngs' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-fngs-rev' @@ -2885,6 +3115,8 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/eico-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INHIBITS-orch' +- $ref: '#/components/x-bte-kgs-operations/gngm-INHIBITS-orch-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-inpo' - $ref: '#/components/x-bte-kgs-operations/anst-PART_OF-neop' - $ref: '#/components/x-bte-kgs-operations/anst-PART_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-CONVERTS_TO-bacs-rev' @@ -2911,6 +3143,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-patf' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/tisu-PRODUCES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-PART_OF-emst' - $ref: '#/components/x-bte-kgs-operations/strd-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-nusq_umls' @@ -2930,6 +3163,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-bacs' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-neop_umls-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-fngs' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-fngs-rev' @@ -2944,6 +3178,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/nsba-STIMULATES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PRODUCES-tisu' - $ref: '#/components/x-bte-kgs-operations/neop-PRODUCES-tisu-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-mobd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREDISPOSES-mobd_umls' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-bdsu' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-bdsu-rev' @@ -2987,6 +3222,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-fngs' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-AFFECTS-celf-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-phsf' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-bdsu' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-bdsu-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-inpo' @@ -2996,6 +3232,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/patf-PRECEDES-comd' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-strd' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-biof-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-DISRUPTS-sosy' - $ref: '#/components/x-bte-kgs-operations/hops-DISRUPTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/celf_umls-PRODUCES-bacs_ncbigene' - $ref: '#/components/x-bte-kgs-operations/celf_umls-PRODUCES-bacs_ncbigene-rev' @@ -3009,6 +3246,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/hops-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/acab-COEXISTS_WITH-anab-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PRODUCES-aapp_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/strd-COEXISTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/opco-DISRUPTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-DISRUPTS-comd_umls' - $ref: '#/components/x-bte-kgs-operations/inch-PREDISPOSES-inpo-rev' @@ -3021,6 +3259,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-tisu' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-lipd' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-horm' +- $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bacs_ncbigene-PREVENTS-dsyn_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AUGMENTS-patf-rev' @@ -3037,6 +3276,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-orch' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-ADMINISTERED_TO-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/strd-DISRUPTS-orgf-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-horm' - $ref: '#/components/x-bte-kgs-operations/strd_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-inpo' @@ -3048,6 +3288,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/anab-AFFECTS-ortf' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/eico-CONVERTS_TO-eico' +- $ref: '#/components/x-bte-kgs-operations/eico-CONVERTS_TO-eico-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-strd' - $ref: '#/components/x-bte-kgs-operations/imft-PREDISPOSES-patf' - $ref: '#/components/x-bte-kgs-operations/imft-PREDISPOSES-patf-rev' @@ -3063,6 +3304,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-COEXISTS_WITH-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PRODUCES-bacs_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-tisu_umls' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-cell' @@ -3079,6 +3321,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/neop-AFFECTS-bact-rev' - $ref: '#/components/x-bte-kgs-operations/inch-AUGMENTS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-nusq' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/hops-DISRUPTS-neop-rev' @@ -3127,11 +3370,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/inch-DISRUPTS-cell-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/nnon-TREATS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/elii-PREDISPOSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/neop-MANIFESTATION_OF-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/opco-AUGMENTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/topp-USES-bacs' +- $ref: '#/components/x-bte-kgs-operations/topp-USES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-COEXISTS_WITH-comd' - $ref: '#/components/x-bte-kgs-operations/orch-ADMINISTERED_TO-aggp' - $ref: '#/components/x-bte-kgs-operations/orch-ADMINISTERED_TO-aggp-rev' @@ -3143,13 +3388,17 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/topp-USES-imft' - $ref: '#/components/x-bte-kgs-operations/topp-USES-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-antb' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-horm' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-antb' - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/food-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-patf' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-acab' - $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-acab-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-strd' - $ref: '#/components/x-bte-kgs-operations/imft-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/nsba-AUGMENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/patf-PRECEDES-neop' @@ -3196,6 +3445,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-mobd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-phsu_umls' - $ref: '#/components/x-bte-kgs-operations/topp-USES-inch' +- $ref: '#/components/x-bte-kgs-operations/antb-STIMULATES-antb-rev' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-bact' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-carb' @@ -3214,6 +3464,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/carb-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-horm' - $ref: '#/components/x-bte-kgs-operations/antb-INTERACTS_WITH-bodm-rev' +- $ref: '#/components/x-bte-kgs-operations/carb-STIMULATES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-carb_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-DISRUPTS-tisu_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-lipd' @@ -3242,9 +3493,11 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-imft' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/comd-MANIFESTATION_OF-comd' - $ref: '#/components/x-bte-kgs-operations/comd-MANIFESTATION_OF-comd-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-imft' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/topp-USES-topp' - $ref: '#/components/x-bte-kgs-operations/topp-USES-topp-rev' @@ -3264,6 +3517,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orch-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-imft' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-sosy-rev' @@ -3271,6 +3525,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-sosy' - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-emod-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-cell' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/opco-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-bdsu' @@ -3295,6 +3550,8 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/opco-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/hops-CONVERTS_TO-hops' +- $ref: '#/components/x-bte-kgs-operations/hops-CONVERTS_TO-hops-rev' +- $ref: '#/components/x-bte-kgs-operations/eico-COEXISTS_WITH-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/lbtr-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/medd-same_as-medd' - $ref: '#/components/x-bte-kgs-operations/medd-same_as-medd-rev' @@ -3319,6 +3576,8 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-lipd' - $ref: '#/components/x-bte-kgs-operations/lipd-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-antb' +- $ref: '#/components/x-bte-kgs-operations/inch-CONVERTS_TO-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/ortf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/cgab-MANIFESTATION_OF-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-horm' - $ref: '#/components/x-bte-kgs-operations/horm-DISRUPTS-bpoc-rev' @@ -3339,6 +3598,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/strd_umls-INHIBITS-gngm_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-eico' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-enzy' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-nnon' @@ -3354,8 +3614,10 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/nnon-COEXISTS_WITH-phsu-rev' - $ref: '#/components/x-bte-kgs-operations/opco-DISRUPTS-neop-rev' +- $ref: '#/components/x-bte-kgs-operations/elii-CONVERTS_TO-inch-rev' - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/carb-PREDISPOSES-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/eico-INHIBITS-eico-rev' - $ref: '#/components/x-bte-kgs-operations/carb-TREATS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-anab' - $ref: '#/components/x-bte-kgs-operations/lipd-INTERACTS_WITH-imft-rev' @@ -3375,6 +3637,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-rcpt' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-fndg-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-imft-rev' - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-emod' - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-emod-rev' @@ -3433,6 +3696,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-imft_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-rcpt-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-tisu' - $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-ASSOCIATED_WITH-dsyn' @@ -3441,18 +3705,22 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-patf' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/irda-COEXISTS_WITH-orch' +- $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-tisu' - $ref: '#/components/x-bte-kgs-operations/carb-COEXISTS_WITH-gngm-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-fndg' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-opco' +- $ref: '#/components/x-bte-kgs-operations/opco-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/eico-INHIBITS-aapp-rev' -- $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-acab' - $ref: '#/components/x-bte-kgs-operations/nnon-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-acab' +- $ref: '#/components/x-bte-kgs-operations/eico-COEXISTS_WITH-eico' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-nusq' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/anab-PART_OF-bact' - $ref: '#/components/x-bte-kgs-operations/anab-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-antb' +- $ref: '#/components/x-bte-kgs-operations/phsf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-opco' - $ref: '#/components/x-bte-kgs-operations/antb-PREDISPOSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-mobd' @@ -3462,6 +3730,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/eico-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-DISRUPTS-tisu' +- $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-anst' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-anst-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/clnd-CAUSES-dsyn' @@ -3471,6 +3740,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-eico' +- $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-eico-rev' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-phsu' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-PREDISPOSES-sosy-rev' @@ -3519,7 +3789,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/virs-CAUSES-mobd' - $ref: '#/components/x-bte-kgs-operations/nusq_umls-INTERACTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/nusq_umls-INTERACTS_WITH-aapp_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/phsu-CONVERTS_TO-gngm' - $ref: '#/components/x-bte-kgs-operations/phsu-CONVERTS_TO-gngm-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-patf' - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-same_as-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-same_as-aapp_ncbigene-rev' @@ -3534,6 +3806,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/medd-TREATS-comd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-acab_umls' +- $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-eico_umls' @@ -3548,6 +3821,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/elii-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-orch' +- $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CONVERTS_TO-gngm' - $ref: '#/components/x-bte-kgs-operations/gngm-CONVERTS_TO-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-CONVERTS_TO-phsu-rev' @@ -3566,12 +3840,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-STIMULATES-gngm_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-anab' - $ref: '#/components/x-bte-kgs-operations/bacs-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/bacs-PRODUCES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bodm_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bodm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/emod-COEXISTS_WITH-patf' - $ref: '#/components/x-bte-kgs-operations/emod-COEXISTS_WITH-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-fndg' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PREVENTS-comd' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-enzy' @@ -3593,6 +3869,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-acab' - $ref: '#/components/x-bte-kgs-operations/clnd-PREVENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/clnd-PREVENTS-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/strd-INHIBITS-horm-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-STIMULATES-gngm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-irda' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-irda-rev' @@ -3618,6 +3895,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-cell' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-cell-rev' - $ref: '#/components/x-bte-kgs-operations/eico-AUGMENTS-fndg-rev' +- $ref: '#/components/x-bte-kgs-operations/carb-CONVERTS_TO-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/eico-AFFECTS-dsyn-rev' @@ -3646,16 +3924,21 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-anst' - $ref: '#/components/x-bte-kgs-operations/carb-DISRUPTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-COMPLICATES-dsyn-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-mobd' - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/hops-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AUGMENTS-inpo-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-nusq' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-nusq-rev' +- $ref: '#/components/x-bte-kgs-operations/nnon-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-sosy_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-fngs-rev' +- $ref: '#/components/x-bte-kgs-operations/opco-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-inch' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-eico_umls' - $ref: '#/components/x-bte-kgs-operations/carb-same_as-carb' - $ref: '#/components/x-bte-kgs-operations/carb-same_as-carb-rev' @@ -3703,6 +3986,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-antb_umls' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-phsu' - $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-carb' +- $ref: '#/components/x-bte-kgs-operations/strd-STIMULATES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-patf-rev' @@ -3730,6 +4014,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_umls-same_as-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-same_as-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-nnon' +- $ref: '#/components/x-bte-kgs-operations/bacs-PREDISPOSES-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-PREDISPOSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-virs-rev' @@ -3756,8 +4041,11 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/antb-same_as-antb' - $ref: '#/components/x-bte-kgs-operations/antb-same_as-antb-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-horm' +- $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-strd' - $ref: '#/components/x-bte-kgs-operations/bacs_ncbigene-INTERACTS_WITH-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-horm' +- $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-horm' +- $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-acab' - $ref: '#/components/x-bte-kgs-operations/comd-PRECEDES-comd-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INHIBITS-inch' - $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-imft-rev' @@ -3766,6 +4054,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/horm-INTERACTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-INTERACTS_WITH-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-phsu' +- $ref: '#/components/x-bte-kgs-operations/opco-INTERACTS_WITH-opco' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-mobd' - $ref: '#/components/x-bte-kgs-operations/nnon_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/antb-CAUSES-celf-rev' @@ -3775,12 +4064,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/phsu-PART_OF-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/enzy_ncbigene-DISRUPTS-ortf_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/enzy-INTERACTS_WITH-nnon-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-biof_umls-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-PART_OF-bact' - $ref: '#/components/x-bte-kgs-operations/enzy-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/nusq_umls-INTERACTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm-INHIBITS-horm' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-hops' +- $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-hops' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CONVERTS_TO-lipd' - $ref: '#/components/x-bte-kgs-operations/nnon-same_as-nnon' @@ -3801,6 +4092,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_umls-INTERACTS_WITH-enzy_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREDISPOSES-sosy_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREDISPOSES-sosy_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-phsu' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-MANIFESTATION_OF-phsf' @@ -3816,6 +4108,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/nnon-PREVENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/neop-COMPLICATES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-LOCATION_OF-phsu_ncbigene' +- $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-enzy' - $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/eico-PREDISPOSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-celc' @@ -3883,6 +4176,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/dsyn-OCCURS_IN-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-acab_umls' - $ref: '#/components/x-bte-kgs-operations/phsu-ADMINISTERED_TO-cell-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-moft' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-moft-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-CAUSES-celf' @@ -3894,6 +4188,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-nsba' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-gngm_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-celc' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/anab-COMPLICATES-anab' @@ -3928,6 +4223,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-strd' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-TREATS-acab_umls' - $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-bacs' +- $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-nnon' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-emst_umls' - $ref: '#/components/x-bte-kgs-operations/comd-PRODUCES-enzy' @@ -3994,11 +4290,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-INHIBITS-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-INHIBITS-gngm_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-comd' - $ref: '#/components/x-bte-kgs-operations/elii-DISRUPTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/irda-ADMINISTERED_TO-cell' - $ref: '#/components/x-bte-kgs-operations/irda-ADMINISTERED_TO-cell-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-PRODUCES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/irda-COEXISTS_WITH-hops' +- $ref: '#/components/x-bte-kgs-operations/irda-COEXISTS_WITH-hops-rev' - $ref: '#/components/x-bte-kgs-operations/patf-COMPLICATES-neop' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-bact_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-orch' @@ -4029,21 +4327,27 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-strd_umls' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-orch' +- $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-TREATS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/horm-PREVENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-AFFECTS-phsf' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-emod' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-emod-rev' +- $ref: '#/components/x-bte-kgs-operations/nnon-PART_OF-virs' - $ref: '#/components/x-bte-kgs-operations/nnon-PART_OF-virs-rev' +- $ref: '#/components/x-bte-kgs-operations/carb-PART_OF-aapp' - $ref: '#/components/x-bte-kgs-operations/carb-PART_OF-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/diap-USES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-PRODUCES-bdsu-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-inpo' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-strd' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-lipd' - $ref: '#/components/x-bte-kgs-operations/horm-CAUSES-celf-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-AFFECTS-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-gngm_ncbigene' +- $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-phsf' +- $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-cgab' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-enzy_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INHIBITS-inch_umls' - $ref: '#/components/x-bte-kgs-operations/sosy-ASSOCIATED_WITH-cgab' @@ -4100,9 +4404,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/antb-STIMULATES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-imft_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-imft_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-mobd' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-anab' - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/orch-same_as-hops' +- $ref: '#/components/x-bte-kgs-operations/orch-same_as-hops-rev' +- $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-enzy' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INHIBITS-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-PRECEDES-emod' @@ -4115,9 +4422,11 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-inpo' - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-celf' - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-celf-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-ADMINISTERED_TO-aggp' - $ref: '#/components/x-bte-kgs-operations/hops-ADMINISTERED_TO-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-COEXISTS_WITH-bacs-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-nnon' - $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-nsba' - $ref: '#/components/x-bte-kgs-operations/strd-DISRUPTS-neop-rev' @@ -4127,7 +4436,6 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-CONVERTS_TO-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-CONVERTS_TO-gngm_ncbigene-rev' -- $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-anab' - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-anab-rev' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-celf' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-celf-rev' @@ -4152,6 +4460,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/nusq-AUGMENTS-celf' - $ref: '#/components/x-bte-kgs-operations/nusq-AUGMENTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-ADMINISTERED_TO-aggp-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-anab' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AUGMENTS-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-STIMULATES-horm_ncbigene' @@ -4202,10 +4511,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/eico-AUGMENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-TREATS-comd' - $ref: '#/components/x-bte-kgs-operations/opco_umls-INTERACTS_WITH-aapp_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-fndg' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-elii' +- $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-elii-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-DISRUPTS-mobd-rev' - $ref: '#/components/x-bte-kgs-operations/opco-AUGMENTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/horm-PRECEDES-topp' @@ -4217,6 +4528,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/nusq-AUGMENTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-STIMULATES-bacs_ncbigene' - $ref: '#/components/x-bte-kgs-operations/virs_umls-LOCATION_OF-gngm_ncbigene' +- $ref: '#/components/x-bte-kgs-operations/inch-AFFECTS-anst' - $ref: '#/components/x-bte-kgs-operations/inch-AFFECTS-anst-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-CAUSES-anab' - $ref: '#/components/x-bte-kgs-operations/bdsu-CAUSES-anab-rev' @@ -4232,6 +4544,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm-PREVENTS-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-PREVENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/orga-MANIFESTATION_OF-phsf' +- $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-emod' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-emod-rev' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-fngs' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-fngs-rev' @@ -4242,13 +4555,16 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/medd-USES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INTERACTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-bacs' +- $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-lipd' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-imft-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-ortf' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-hops' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CAUSES-sosy_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-mobd_umls' - $ref: '#/components/x-bte-kgs-operations/inch-TREATS-sosy-rev' @@ -4272,7 +4588,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/opco-STIMULATES-hops-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-mobd' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-STIMULATES-gngm_ncbigene-rev' +- $ref: '#/components/x-bte-kgs-operations/lipd-CONVERTS_TO-lipd' - $ref: '#/components/x-bte-kgs-operations/bact-PRODUCES-orch' +- $ref: '#/components/x-bte-kgs-operations/bact-PRODUCES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-phsu' - $ref: '#/components/x-bte-kgs-operations/enzy-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-TREATS-patf-rev' @@ -4289,12 +4607,14 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/antb-ADMINISTERED_TO-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/horm-PREDISPOSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-acab' +- $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-mobd' - $ref: '#/components/x-bte-kgs-operations/nusq-AUGMENTS-orgf' - $ref: '#/components/x-bte-kgs-operations/opco_umls-COEXISTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/orga-ASSOCIATED_WITH-cgab' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-orch_umls' +- $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-orch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/opco-INHIBITS-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-AFFECTS-acab' - $ref: '#/components/x-bte-kgs-operations/orga-MANIFESTATION_OF-ortf' @@ -4322,7 +4642,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/tisu-PRODUCES-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/orch-PART_OF-celc-rev' +- $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-aggp' - $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-aggp-rev' +- $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-acab' - $ref: '#/components/x-bte-kgs-operations/cell_umls-LOCATION_OF-bacs_ncbigene' - $ref: '#/components/x-bte-kgs-operations/lipd-PREVENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-aapp' @@ -4341,8 +4663,10 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/fndg-ASSOCIATED_WITH-dsyn' - $ref: '#/components/x-bte-kgs-operations/fndg-ASSOCIATED_WITH-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-INHIBITS-orch' +- $ref: '#/components/x-bte-kgs-operations/rcpt-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-moft' - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-moft-rev' +- $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-PRODUCES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-antb' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-ASSOCIATED_WITH-dsyn_umls-rev' @@ -4363,6 +4687,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-anst-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-PREVENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-TREATS-patf-rev' +- $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-nusq' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-phsu' - $ref: '#/components/x-bte-kgs-operations/cgab-PREDISPOSES-neop-rev' @@ -4386,9 +4711,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/acab-MANIFESTATION_OF-patf-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-orch' - $ref: '#/components/x-bte-kgs-operations/strd-DISRUPTS-sosy-rev' -- $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/fngs-INTERACTS_WITH-virs' - $ref: '#/components/x-bte-kgs-operations/fngs-INTERACTS_WITH-virs-rev' +- $ref: '#/components/x-bte-kgs-operations/enzy-COEXISTS_WITH-elii-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-anab_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-anab_umls-rev' - $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-rcpt' @@ -4426,6 +4751,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-moft-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-neop' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-rcpt_umls-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-ortf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-anab_umls' @@ -4492,10 +4818,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-phsu_ncbigene' - $ref: '#/components/x-bte-kgs-operations/opco-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-comd' +- $ref: '#/components/x-bte-kgs-operations/nsba-CONVERTS_TO-hops-rev' - $ref: '#/components/x-bte-kgs-operations/mobd-PRODUCES-tisu-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-hops' +- $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-hops-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-antb' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-nsba' +- $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-cell' - $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-cell-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-INHIBITS-imft-rev' - $ref: '#/components/x-bte-kgs-operations/strd-INTERACTS_WITH-rcpt-rev' @@ -4517,6 +4846,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/opco-AUGMENTS-comd-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-PREVENTS-emod' - $ref: '#/components/x-bte-kgs-operations/phsu-PREVENTS-emod-rev' +- $ref: '#/components/x-bte-kgs-operations/diap-USES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/lbtr-MANIFESTATION_OF-inpo' - $ref: '#/components/x-bte-kgs-operations/lbtr-MANIFESTATION_OF-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/ortf_umls-PRODUCES-horm_ncbigene-rev' @@ -4548,6 +4878,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-irda' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-irda-rev' +- $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-rcpt' - $ref: '#/components/x-bte-kgs-operations/lipd-CAUSES-celf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-hops' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PRODUCES-bdsu_umls-rev' @@ -4558,6 +4889,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/imft-PRECEDES-topp' - $ref: '#/components/x-bte-kgs-operations/imft-PRECEDES-topp-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-inch' +- $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-inch-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PRECEDES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-PRODUCES-gngm_ncbigene' @@ -4569,6 +4901,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/lbtr-MANIFESTATION_OF-dsyn' - $ref: '#/components/x-bte-kgs-operations/lbtr-MANIFESTATION_OF-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/biof-PRODUCES-horm' +- $ref: '#/components/x-bte-kgs-operations/biof-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-aapp' - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-aapp-rev' @@ -4578,6 +4911,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/orch-same_as-topp' - $ref: '#/components/x-bte-kgs-operations/orch-same_as-topp-rev' +- $ref: '#/components/x-bte-kgs-operations/mobd-PRODUCES-nsba-rev' - $ref: '#/components/x-bte-kgs-operations/neop-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-acab' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-phsu' @@ -4604,7 +4938,9 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-vita' - $ref: '#/components/x-bte-kgs-operations/emod-COEXISTS_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-eico_umls' +- $ref: '#/components/x-bte-kgs-operations/bacs_umls-INHIBITS-bacs_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-rcpt' +- $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-enzy' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-AFFECTS-orgf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-acab' @@ -4642,10 +4978,12 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-patf' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CONVERTS_TO-orch' +- $ref: '#/components/x-bte-kgs-operations/gngm-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-CONVERTS_TO-nusq' - $ref: '#/components/x-bte-kgs-operations/nusq-CONVERTS_TO-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-inpo' - $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-lipd' +- $ref: '#/components/x-bte-kgs-operations/phsu-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/phsu-PRODUCES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs_ncbigene-AFFECTS-celf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/opco-CAUSES-celf-rev' @@ -4654,6 +4992,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/diap-USES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/inch-DISRUPTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-CONVERTS_TO-inch_umls' +- $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-CONVERTS_TO-inch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/rcpt-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-PREVENTS-inpo-rev' @@ -4663,6 +5002,8 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-phsf' - $ref: '#/components/x-bte-kgs-operations/nnon-AUGMENTS-sosy-rev' +- $ref: '#/components/x-bte-kgs-operations/carb-same_as-bacs' +- $ref: '#/components/x-bte-kgs-operations/carb-same_as-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-rcpt' - $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-rcpt-rev' @@ -4673,11 +5014,13 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-aapp_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/celc_umls-LOCATION_OF-bacs_ncbigene' +- $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-biof' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-INTERACTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-strd' +- $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-opco' - $ref: '#/components/x-bte-kgs-operations/inch-TREATS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/irda-DISRUPTS-orgf' - $ref: '#/components/x-bte-kgs-operations/irda-DISRUPTS-orgf-rev' @@ -4700,6 +5043,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/inch-DISRUPTS-anst-rev' - $ref: '#/components/x-bte-kgs-operations/imft_ncbigene-ASSOCIATED_WITH-neop_umls-rev' - $ref: '#/components/x-bte-kgs-operations/strd-CONVERTS_TO-horm-rev' +- $ref: '#/components/x-bte-kgs-operations/opco-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-eico' - $ref: '#/components/x-bte-kgs-operations/bact-CAUSES-mobd' - $ref: '#/components/x-bte-kgs-operations/clnd-CAUSES-acab' @@ -4716,6 +5060,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/rcpt-AFFECTS-patf' - $ref: '#/components/x-bte-kgs-operations/rcpt-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-COEXISTS_WITH-rcpt-rev' +- $ref: '#/components/x-bte-kgs-operations/horm-CONVERTS_TO-strd' - $ref: '#/components/x-bte-kgs-operations/topp-COMPLICATES-orgf' - $ref: '#/components/x-bte-kgs-operations/topp-COMPLICATES-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-nusq-rev' @@ -4746,6 +5091,7 @@ x-bte-kgs-operations: - $ref: '#/components/x-bte-kgs-operations/anab-AFFECTS-bact' - $ref: '#/components/x-bte-kgs-operations/anab-AFFECTS-bact-rev' - $ref: '#/components/x-bte-kgs-operations/medd-USES-carb' +- $ref: '#/components/x-bte-kgs-operations/horm-CONVERTS_TO-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-DISRUPTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/irda-INHIBITS-inch' diff --git a/semmeddb/generated_operations.yaml b/semmeddb/generated_operations.yaml index dc3cd711..0bff862b 100644 --- a/semmeddb/generated_operations.yaml +++ b/semmeddb/generated_operations.yaml @@ -688,7 +688,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided @@ -700,7 +700,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -772,7 +772,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -808,7 +808,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -1207,6 +1207,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bdsu-LOCATION_OF-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:bdsu AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: AnatomicalEntity + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-PART_OF-celc: - supportBatch: True useTemplating: True @@ -1872,13 +1896,37 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bpoc-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:bpoc AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' dsyn-CAUSES-dsyn: - supportBatch: True useTemplating: True @@ -1980,7 +2028,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -2016,7 +2064,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -2732,7 +2780,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -2768,7 +2816,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -3312,7 +3360,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -3324,7 +3372,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -3444,7 +3492,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -3480,7 +3528,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -4124,7 +4172,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -4160,7 +4208,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -4460,7 +4508,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -4500,7 +4548,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -5124,7 +5172,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -5160,7 +5208,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -5676,7 +5724,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -5712,7 +5760,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -5748,7 +5796,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -5784,7 +5832,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -5796,7 +5844,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -5844,7 +5892,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -5880,7 +5928,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -6111,6 +6159,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-STIMULATES-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:gngm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orch-STIMULATES-gngm-rev: - supportBatch: True useTemplating: True @@ -6900,7 +6976,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -6912,7 +6988,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -6924,7 +7000,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -6936,7 +7012,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -6960,7 +7036,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -6976,7 +7052,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -7100,7 +7176,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -7112,7 +7188,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -7124,7 +7200,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -7136,7 +7212,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -7527,6 +7603,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-INTERACTS_WITH-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:aapp + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-INTERACTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -7551,6 +7651,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:gngm AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-gngm-rev: - supportBatch: True useTemplating: True @@ -7568,7 +7696,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -7603,12 +7731,36 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-AFFECTS-celf: + aapp-INTERACTS_WITH-orch-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:aapp + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -7644,7 +7796,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -8352,7 +8504,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -8508,7 +8660,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -8520,7 +8672,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -9072,7 +9224,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -10063,6 +10215,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-PART_OF-bpoc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:bpoc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nsba-PART_OF-bpoc-rev: - supportBatch: True useTemplating: True @@ -10968,7 +11144,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -10980,7 +11156,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -11240,7 +11416,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided @@ -11252,7 +11428,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -11432,7 +11608,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -11448,7 +11624,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -11888,7 +12064,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -11924,7 +12100,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -12027,6 +12203,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CAUSES-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -12044,7 +12244,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -12280,7 +12480,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -12316,7 +12516,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -12379,6 +12579,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + orch-AFFECTS-orgf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:orgf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-orgf-rev: - supportBatch: True useTemplating: True @@ -12408,7 +12632,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -12448,7 +12672,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -12627,6 +12851,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CAUSES-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-CAUSES-patf-rev: - supportBatch: True useTemplating: True @@ -12644,7 +12892,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -13248,7 +13496,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -13260,7 +13508,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -13276,7 +13524,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -13288,7 +13536,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -13299,6 +13547,82 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-INTERACTS_WITH-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:bacs + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:orch + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + orch_umls-STIMULATES-gngm_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:gngm AND + _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orch_umls-STIMULATES-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -13420,7 +13744,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -13436,7 +13760,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -13512,7 +13836,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -13548,7 +13872,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -13668,7 +13992,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -13680,7 +14004,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -13819,6 +14143,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bact-LOCATION_OF-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:bact AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Bacterium + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-PART_OF-bact_umls: - supportBatch: True useTemplating: True @@ -14115,6 +14463,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:celf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' food-CAUSES-dsyn: - supportBatch: True useTemplating: True @@ -14916,7 +15288,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -14952,7 +15324,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -15175,6 +15547,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-ASSOCIATED_WITH-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:dsyn + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm-ASSOCIATED_WITH-dsyn-rev: - supportBatch: True useTemplating: True @@ -15228,7 +15624,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -15295,6 +15691,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-inch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:inch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-COEXISTS_WITH-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:bacs + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm_umls-STIMULATES-gngm_ncbigene: - supportBatch: True useTemplating: True @@ -15756,7 +16200,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -15792,7 +16236,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -16116,7 +16560,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -16152,7 +16596,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -16327,12 +16771,40 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:bacs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-bacs-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -16344,7 +16816,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -16396,7 +16868,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -16579,6 +17051,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + lipd-PART_OF-bact: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:bact AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Bacterium + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-bact-rev: - supportBatch: True useTemplating: True @@ -16603,12 +17099,40 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - orch-STIMULATES-bacs-rev: + orch-STIMULATES-bacs: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:bacs AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased + orch-STIMULATES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -16860,7 +17384,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -16900,7 +17424,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -17007,6 +17531,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + bacs-DISRUPTS-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:celf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-celf-rev: - supportBatch: True useTemplating: True @@ -17024,13 +17572,61 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-COEXISTS_WITH-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:bacs AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:orch + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cell-LOCATION_OF-bsoj: - supportBatch: True useTemplating: True @@ -17096,7 +17692,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -17108,7 +17704,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -17319,6 +17915,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:orch + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:bacs + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' imft-ASSOCIATED_WITH-dsyn: - supportBatch: True useTemplating: True @@ -17564,7 +18208,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -17619,6 +18263,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-AFFECTS-ortf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:ortf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-CAUSES-comd: - supportBatch: True useTemplating: True @@ -17955,6 +18623,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp-COEXISTS_WITH-phsu-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:aapp + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-INTERACTS_WITH-cell: - supportBatch: True useTemplating: True @@ -18075,6 +18767,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + hops-CAUSES-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-CAUSES-inpo-rev: - supportBatch: True useTemplating: True @@ -18092,7 +18808,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -18219,6 +18935,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-PART_OF-celc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:celc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-celc-rev: - supportBatch: True useTemplating: True @@ -18376,7 +19116,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -18395,6 +19135,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + tisu-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:tisu AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' orch-INHIBITS-orch: - supportBatch: True useTemplating: True @@ -18423,6 +19187,58 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + orch-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:orch AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased + bacs-CAUSES-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' sosy-PROCESS_OF-aggp: - supportBatch: True useTemplating: True @@ -18519,6 +19335,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-AFFECTS-moft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:moft AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: MolecularActivity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' phsu-AFFECTS-moft-rev: - supportBatch: True useTemplating: True @@ -18664,7 +19504,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -18676,7 +19516,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -19319,6 +20159,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-AUGMENTS-moft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:moft AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: MolecularActivity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased phsu-AUGMENTS-moft-rev: - supportBatch: True useTemplating: True @@ -19347,6 +20215,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs_umls-INHIBITS-gngm_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:gngm AND _exists_:object.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs_umls-INHIBITS-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -19364,7 +20260,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -19392,7 +20288,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -19404,7 +20300,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -19423,6 +20319,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-orgf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:orgf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orgf-AFFECTS-orga: - supportBatch: True useTemplating: True @@ -19644,7 +20564,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -19680,7 +20600,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -19704,7 +20624,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -19716,7 +20636,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -19764,7 +20684,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -19800,7 +20720,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -19972,7 +20892,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -20020,13 +20940,37 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + fngs-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:fngs AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Fungus + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cell-LOCATION_OF-diap: - supportBatch: True useTemplating: True @@ -20104,7 +21048,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -20140,7 +21084,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -20200,7 +21144,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -20236,7 +21180,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -20583,6 +21527,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-PREVENTS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PREVENTS-dsyn-rev: - supportBatch: True useTemplating: True @@ -20600,7 +21568,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -20924,7 +21892,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -21020,7 +21988,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -21056,7 +22024,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -21627,6 +22595,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:orch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-INTERACTS_WITH-gngm_umls: - supportBatch: True useTemplating: True @@ -21692,7 +22684,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -21840,7 +22832,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -21852,7 +22844,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -22019,6 +23011,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-bpoc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:bpoc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -22431,6 +23447,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nnon-ADMINISTERED_TO-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ADMINISTERED_TO AND object.semantic_type_abbreviation:cell + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-ADMINISTERED_TO-cell-rev: - supportBatch: True useTemplating: True @@ -22699,6 +23739,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + aapp-STIMULATES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:aapp AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased aapp-AUGMENTS-tisu: - supportBatch: True useTemplating: True @@ -23215,6 +24283,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-COEXISTS_WITH-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:aapp AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-COEXISTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -23460,13 +24552,37 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + cell-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:cell AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm_ncbigene-PART_OF-neop_umls: - supportBatch: True useTemplating: True @@ -23691,6 +24807,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-moft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:moft AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: MolecularActivity + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-moft-rev: - supportBatch: True useTemplating: True @@ -23708,7 +24848,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -23984,7 +25124,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -24379,6 +25519,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-ASSOCIATED_WITH-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:neop + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' cgab-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -24408,7 +25572,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -24444,7 +25608,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -24456,7 +25620,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -24492,7 +25656,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -24760,7 +25924,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -24772,7 +25936,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -24892,7 +26056,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -24932,7 +26096,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -25008,7 +26172,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -25215,6 +26379,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-AFFECTS-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:cell AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-cell-rev: - supportBatch: True useTemplating: True @@ -25267,6 +26455,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + aapp-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:aapp AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased food-AFFECTS-orgf: - supportBatch: True useTemplating: True @@ -25339,6 +26555,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-AFFECTS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-patf-rev: - supportBatch: True useTemplating: True @@ -25416,7 +26656,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -25535,6 +26775,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-AFFECTS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm_umls-STIMULATES-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -25616,7 +26880,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -25635,6 +26899,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + bacs-AUGMENTS-ortf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:ortf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-ortf-rev: - supportBatch: True useTemplating: True @@ -25652,7 +26944,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -25663,6 +26955,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + phsu-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:phsu + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' orgf-AFFECTS-dsyn-rev: - supportBatch: True useTemplating: True @@ -25768,7 +27084,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -26080,7 +27396,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -26272,7 +27588,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -26284,7 +27600,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -26828,7 +28144,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -26844,7 +28160,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -27080,7 +28396,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -27331,7 +28647,31 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-INTERACTS_WITH-lipd: + bacs-COEXISTS_WITH-phsu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:phsu AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-COEXISTS_WITH-lipd: - supportBatch: True useTemplating: True inputs: @@ -27341,6 +28681,30 @@ x-bte-kgs-operations: body: q: '{{ queryInputs }}' scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:lipd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INTERACTS_WITH-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls parameters: fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 @@ -27371,6 +28735,30 @@ x-bte-kgs-operations: filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:hops AND _exists_:subject.umls AND pmid_count:>3 outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:elii + AND _exists_:subject.umls AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule predicate: interacts_with @@ -27667,6 +29055,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-PART_OF-tisu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:tisu AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nusq-COEXISTS_WITH-aapp: - supportBatch: True useTemplating: True @@ -27840,7 +29252,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -27876,7 +29288,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -27955,6 +29367,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-phsf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:phsf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-CAUSES-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' phsu-TREATS-acab: - supportBatch: True useTemplating: True @@ -28027,6 +29487,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + nnon-AFFECTS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-AFFECTS-neop-rev: - supportBatch: True useTemplating: True @@ -28256,7 +29740,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -28528,7 +30012,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -28564,7 +30048,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -28867,6 +30351,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:elii + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' antb-INTERACTS_WITH-antb: - supportBatch: True useTemplating: True @@ -29035,6 +30543,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-CAUSES-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-CAUSES-sosy-rev: - supportBatch: True useTemplating: True @@ -29052,7 +30584,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -29064,7 +30596,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -29088,7 +30620,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -29379,6 +30911,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INTERACTS_WITH-phsu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:phsu + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-PRODUCES-orch: - supportBatch: True useTemplating: True @@ -29403,6 +30959,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-PRODUCES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:gngm AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-PART_OF-emst: - supportBatch: True useTemplating: True @@ -29460,7 +31040,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -29583,6 +31163,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-STIMULATES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:orch AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased elii-INTERACTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -30095,12 +31703,36 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - bacs-COEXISTS_WITH-gngm: + elii-COEXISTS_WITH-bacs-rev: - supportBatch: True useTemplating: True inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:elii + AND _exists_:subject.umls AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -30136,7 +31768,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -30172,7 +31804,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -30196,7 +31828,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -30751,6 +32383,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-INTERACTS_WITH-inch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:inch + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' aapp_ncbigene-DISRUPTS-orgf_umls: - supportBatch: True useTemplating: True @@ -30967,6 +32623,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch_umls-INTERACTS_WITH-aapp_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:aapp + AND _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' orch_umls-INTERACTS_WITH-aapp_ncbigene-rev: - supportBatch: True useTemplating: True @@ -31044,7 +32724,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -31164,7 +32844,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -31188,7 +32868,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -31212,7 +32892,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -31248,7 +32928,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -31488,13 +33168,65 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bpoc-PRODUCES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:bpoc AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-STIMULATES-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:aapp AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased lipd-STIMULATES-aapp-rev: - supportBatch: True useTemplating: True @@ -31523,6 +33255,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + inch-INTERACTS_WITH-elii-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:inch + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' bpoc-LOCATION_OF-emod: - supportBatch: True useTemplating: True @@ -31651,6 +33407,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + inch-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:inch + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm_ncbigene-COEXISTS_WITH-bacs_umls: - supportBatch: True useTemplating: True @@ -31668,7 +33448,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -31680,7 +33460,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -31900,7 +33680,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -31936,7 +33716,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -32124,7 +33904,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -32160,7 +33940,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -32643,6 +34423,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-COEXISTS_WITH-imft: - supportBatch: True useTemplating: True @@ -32696,7 +34500,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -32904,7 +34708,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -32939,6 +34743,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + lipd-PART_OF-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:cell AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-cell-rev: - supportBatch: True useTemplating: True @@ -33083,6 +34911,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-PREDISPOSES-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:dsyn AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-PREDISPOSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -33155,6 +35007,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch_umls-INTERACTS_WITH-gngm_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:gngm + AND _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' dora-TREATS-sosy: - supportBatch: True useTemplating: True @@ -33427,6 +35303,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-COEXISTS_WITH-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:hops AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-COEXISTS_WITH-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:hops + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-AUGMENTS-orgf_umls: - supportBatch: True useTemplating: True @@ -33484,7 +35408,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -33532,7 +35456,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -33644,7 +35568,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -33675,6 +35599,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp_ncbigene-INTERACTS_WITH-horm_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:aapp + AND _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' dsyn-DISRUPTS-cell: - supportBatch: True useTemplating: True @@ -33740,7 +35688,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -33752,7 +35700,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -34039,6 +35987,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + aapp_ncbigene-STIMULATES-horm_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:aapp AND + _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased nsba-AFFECTS-orgf-rev: - supportBatch: True useTemplating: True @@ -34156,13 +36132,37 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + celc-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:celc AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' bdsu_umls-LOCATION_OF-gngm_ncbigene: - supportBatch: True useTemplating: True @@ -34276,7 +36276,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -34288,7 +36288,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -34379,6 +36379,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:aapp AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-aapp-rev: - supportBatch: True useTemplating: True @@ -34396,7 +36424,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -34412,7 +36440,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -34448,7 +36476,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided @@ -34460,7 +36488,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -34675,6 +36703,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-ASSOCIATED_WITH-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:mobd + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' aapp-DISRUPTS-bpoc: - supportBatch: True useTemplating: True @@ -34888,7 +36940,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -35067,6 +37119,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm_ncbigene-INTERACTS_WITH-orch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' mobd-MANIFESTATION_OF-dsyn: - supportBatch: True useTemplating: True @@ -35656,7 +37732,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -35848,7 +37924,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -35924,7 +38000,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -35960,7 +38036,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -36140,7 +38216,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -36680,7 +38756,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -36692,7 +38768,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -36831,6 +38907,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-ASSOCIATED_WITH-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:patf + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm-ASSOCIATED_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -36860,7 +38960,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -36931,6 +39031,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:phsu + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' horm-CAUSES-patf-rev: - supportBatch: True useTemplating: True @@ -37024,7 +39148,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -37083,6 +39207,30 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-COEXISTS_WITH-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:elii AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' cell-PRODUCES-gngm: - supportBatch: True useTemplating: True @@ -37155,6 +39303,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-COEXISTS_WITH-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:lipd + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nsba-AUGMENTS-ortf-rev: - supportBatch: True useTemplating: True @@ -37404,7 +39576,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -37416,7 +39588,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -37428,7 +39600,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -37503,6 +39675,62 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-INHIBITS-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:orch AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased + bacs-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:bacs AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased gngm_ncbigene-ASSOCIATED_WITH-mobd_umls: - supportBatch: True useTemplating: True @@ -37555,6 +39783,30 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-PREDISPOSES-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:neop AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' aapp_ncbigene-INTERACTS_WITH-cell_umls-rev: - supportBatch: True useTemplating: True @@ -37632,7 +39884,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -37720,7 +39972,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -37732,7 +39984,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -37827,6 +40079,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' imft-AUGMENTS-ortf: - supportBatch: True useTemplating: True @@ -37991,6 +40267,62 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + bacs-STIMULATES-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:orch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased + bacs-STIMULATES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:bacs AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased aapp-CAUSES-mobd: - supportBatch: True useTemplating: True @@ -38152,7 +40484,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -38164,7 +40496,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -38279,6 +40611,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-neop-rev: - supportBatch: True useTemplating: True @@ -38296,7 +40652,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -38356,7 +40712,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -38399,6 +40755,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-INTERACTS_WITH-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:hops + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:horm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' phsu-PREDISPOSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -38471,6 +40875,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-PREVENTS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PREVENTS-inpo-rev: - supportBatch: True useTemplating: True @@ -38488,7 +40916,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -38619,6 +41047,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:horm + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' patf-COEXISTS_WITH-anab: - supportBatch: True useTemplating: True @@ -38700,7 +41152,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -38736,7 +41188,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -38796,7 +41248,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -38808,7 +41260,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -38820,7 +41272,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -38832,7 +41284,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -38928,13 +41380,37 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + plnt-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:plnt AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Plant + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' ortf-PROCESS_OF-aggp-rev: - supportBatch: True useTemplating: True @@ -39079,12 +41555,36 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-phsf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:phsf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-STIMULATES-bacs-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -39096,7 +41596,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -39515,6 +42015,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:hops + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' horm-COEXISTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -39544,7 +42068,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -39620,7 +42144,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -39887,6 +42411,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-INTERACTS_WITH-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:lipd + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' aapp-PART_OF-aapp: - supportBatch: True useTemplating: True @@ -39996,7 +42544,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -40087,7 +42635,7 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - horm-STIMULATES-bacs-rev: + cell-PRODUCES-horm-rev: - supportBatch: True useTemplating: True inputs: @@ -40097,6 +42645,30 @@ x-bte-kgs-operations: body: q: '{{ queryInputs }}' scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:cell AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-STIMULATES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls parameters: fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 @@ -40160,7 +42732,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -40176,7 +42748,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -40199,6 +42771,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-INTERACTS_WITH-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:gngm + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-INTERACTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -40228,7 +42824,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -40264,7 +42860,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -40436,7 +43032,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -40452,7 +43048,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -40523,30 +43119,6 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - sbst-CAUSES-patf: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:patf AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: PathologicalProcess - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' sbst-CAUSES-patf-rev: - supportBatch: True useTemplating: True @@ -40624,7 +43196,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -40643,6 +43215,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + lipd-INTERACTS_WITH-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:lipd + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' orgf-AFFECTS-mobd: - supportBatch: True useTemplating: True @@ -40684,7 +43280,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -40696,7 +43292,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -40763,6 +43359,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch_umls-COEXISTS_WITH-gngm_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:gngm AND + _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' orch_umls-COEXISTS_WITH-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -41011,6 +43631,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-AFFECTS-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-COEXISTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -41128,7 +43772,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -41188,7 +43832,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -41211,6 +43855,30 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-AFFECTS-celc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:celc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-celc-rev: - supportBatch: True useTemplating: True @@ -41339,12 +44007,40 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased - bacs-COEXISTS_WITH-imft: + horm-STIMULATES-horm-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:horm AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased + bacs-COEXISTS_WITH-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -41380,7 +44076,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -41567,30 +44263,6 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased - sbst-CAUSES-dsyn: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' sbst-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -41720,7 +44392,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -42028,7 +44700,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -42371,6 +45043,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-INTERACTS_WITH-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:carb + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + carb-INTERACTS_WITH-carb-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:carb + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' opco-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -42443,6 +45163,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nnon-INTERACTS_WITH-nnon: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:nnon + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + nnon-INTERACTS_WITH-nnon-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:nnon + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' rcpt-COEXISTS_WITH-bacs: - supportBatch: True useTemplating: True @@ -42460,7 +45228,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -42472,7 +45240,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -42496,7 +45264,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -42591,6 +45359,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-tisu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:tisu AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-PRODUCES-horm: - supportBatch: True useTemplating: True @@ -42827,6 +45619,90 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + phsu-INHIBITS-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:phsu AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased + hops-STIMULATES-nsba: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:nsba AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased + hops-STIMULATES-nsba-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:hops AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased dora-PREDISPOSES-neop: - supportBatch: True useTemplating: True @@ -42875,6 +45751,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-PREDISPOSES-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:patf AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-PREDISPOSES-patf-rev: - supportBatch: True useTemplating: True @@ -42899,6 +45799,58 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-STIMULATES-nsba-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:nsba AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased + bacs-DISRUPTS-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:cell AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-cell-rev: - supportBatch: True useTemplating: True @@ -42916,7 +45868,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -43100,7 +46052,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -43280,7 +46232,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -43308,7 +46260,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -43475,6 +46427,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-DISRUPTS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-patf-rev: - supportBatch: True useTemplating: True @@ -43492,7 +46468,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -43588,13 +46564,37 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp-PRODUCES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:aapp AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' orch-CAUSES-cgab: - supportBatch: True useTemplating: True @@ -43667,6 +46667,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-antb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:antb + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' acab-COEXISTS_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -43744,7 +46768,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -43772,7 +46796,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -43823,6 +46847,30 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-AFFECTS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' biof-AFFECTS-orgf: - supportBatch: True useTemplating: True @@ -43943,6 +46991,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-nsba: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:nsba + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' diap-DIAGNOSES-comd: - supportBatch: True useTemplating: True @@ -44188,13 +47260,37 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-biof: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:biof AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Phenomenon + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-biof-rev: - supportBatch: True useTemplating: True @@ -44315,6 +47411,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-COEXISTS_WITH-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:carb + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' elii-AUGMENTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -44528,7 +47648,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -44563,6 +47683,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-COEXISTS_WITH-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:gngm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-COEXISTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -44756,7 +47900,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -45024,7 +48168,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -45036,7 +48180,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45103,6 +48247,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-COEXISTS_WITH-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:carb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nsba-ASSOCIATED_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -45232,7 +48400,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45576,7 +48744,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45700,7 +48868,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45740,7 +48908,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -45924,7 +49092,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45960,7 +49128,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -46019,6 +49187,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-INHIBITS-inch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:inch AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased nsba-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -46067,6 +49263,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + irda-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:irda + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiagnosticAid + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-PRODUCES-eico: - supportBatch: True useTemplating: True @@ -46240,7 +49460,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -46359,6 +49579,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + antb-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:antb + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cell-PRODUCES-nnon: - supportBatch: True useTemplating: True @@ -46388,7 +49632,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -46495,6 +49739,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + elii-INHIBITS-elii-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:elii AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased gngm-PRODUCES-nnon: - supportBatch: True useTemplating: True @@ -46552,7 +49824,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -46808,7 +50080,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -46844,13 +50116,61 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CONVERTS_TO-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:orch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-CONVERTS_TO-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:bacs AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' dora-PREVENTS-sosy: - supportBatch: True useTemplating: True @@ -47104,7 +50424,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -47227,6 +50547,54 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-CAUSES-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + nsba-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:nsba + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-COEXISTS_WITH-inch: - supportBatch: True useTemplating: True @@ -47251,6 +50619,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-COEXISTS_WITH-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' neop-MANIFESTATION_OF-neop: - supportBatch: True useTemplating: True @@ -47323,6 +50715,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm_ncbigene-COEXISTS_WITH-inch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' sosy-PREDISPOSES-mobd: - supportBatch: True useTemplating: True @@ -47392,7 +50808,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -47404,7 +50820,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -47615,6 +51031,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-STIMULATES-phsu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:phsu AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased gngm-COEXISTS_WITH-nusq: - supportBatch: True useTemplating: True @@ -47732,7 +51176,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -47864,7 +51308,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -48036,7 +51480,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -48131,6 +51575,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-INHIBITS-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:elii AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased horm-AFFECTS-patf-rev: - supportBatch: True useTemplating: True @@ -48251,6 +51723,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-TREATS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-TREATS-dsyn-rev: - supportBatch: True useTemplating: True @@ -48268,7 +51764,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: subject_of_treatment_application_or_study_for_treatment_by source: "infores:semmeddb" knowledge_level: not_provided @@ -48292,7 +51788,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -48371,6 +51867,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-INTERACTS_WITH-irda: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:irda + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiagnosticAid + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-INTERACTS_WITH-irda-rev: - supportBatch: True useTemplating: True @@ -48567,6 +52087,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + antb-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:antb + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' imft_umls-STIMULATES-gngm_ncbigene: - supportBatch: True useTemplating: True @@ -48640,7 +52184,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -48871,6 +52415,30 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + orch-PREDISPOSES-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:inpo AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' imft-AFFECTS-cell: - supportBatch: True useTemplating: True @@ -48948,7 +52516,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -48971,6 +52539,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + inch-INHIBITS-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:inch AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased ortf-PROCESS_OF-emod-rev: - supportBatch: True useTemplating: True @@ -49192,7 +52788,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -49228,7 +52824,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -49263,6 +52859,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-AFFECTS-sosy-rev: - supportBatch: True useTemplating: True @@ -49280,7 +52900,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -49304,7 +52924,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -49596,7 +53216,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -50284,7 +53904,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -50320,13 +53940,65 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-PREDISPOSES-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:comd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-AUGMENTS-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-comd-rev: - supportBatch: True useTemplating: True @@ -50344,7 +54016,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -50451,6 +54123,82 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + eico-INTERACTS_WITH-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:eico + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + eico-INTERACTS_WITH-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:eico + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-INHIBITS-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:horm AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased gngm_ncbigene-AUGMENTS-celc_umls-rev: - supportBatch: True useTemplating: True @@ -50704,7 +54452,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -50740,7 +54488,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -50752,7 +54500,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -50775,6 +54523,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-AUGMENTS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orch-AUGMENTS-patf-rev: - supportBatch: True useTemplating: True @@ -50940,7 +54716,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -51267,12 +55043,40 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - bacs-INTERACTS_WITH-bodm: + bacs-INHIBITS-phsu: - supportBatch: True useTemplating: True inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:phsu AND _exists_:object.umls + AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased + bacs-INTERACTS_WITH-bodm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -51308,7 +55112,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -51440,7 +55244,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -51476,13 +55280,37 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + inch-ASSOCIATED_WITH-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:inpo + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-ASSOCIATED_WITH-inpo-rev: - supportBatch: True useTemplating: True @@ -51707,6 +55535,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + neop-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:neop AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-DISRUPTS-cell_umls: - supportBatch: True useTemplating: True @@ -51779,12 +55631,12 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-inpo: + elii-STIMULATES-inch: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: ChemicalEntity + semantic: SmallMolecule requestBody: body: q: '{{ queryInputs }}' @@ -51792,17 +55644,49 @@ x-bte-kgs-operations: parameters: fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls - AND pmid_count:>3 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:inch AND + _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: PathologicalProcess - predicate: causes + semantic: SmallMolecule + predicate: affects source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased + elii-STIMULATES-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:elii AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased nsba-COEXISTS_WITH-orch-rev: - supportBatch: True useTemplating: True @@ -52156,7 +56040,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -52316,7 +56200,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -52428,7 +56312,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -52560,7 +56444,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -52572,7 +56456,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -52591,6 +56475,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd_umls-STIMULATES-aapp_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:aapp AND + _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased nnon-AFFECTS-patf-rev: - supportBatch: True useTemplating: True @@ -52620,7 +56532,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -52715,6 +56627,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp_ncbigene-COEXISTS_WITH-phsu_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:aapp + AND _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + orch-INTERACTS_WITH-bodm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:bodm + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Device + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-INTERACTS_WITH-bodm-rev: - supportBatch: True useTemplating: True @@ -52908,7 +56868,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -53275,30 +57235,6 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - sbst-AFFECTS-moft: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:AFFECTS AND object.semantic_type_abbreviation:moft AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: MolecularActivity - predicate: affects - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' sbst-AFFECTS-moft-rev: - supportBatch: True useTemplating: True @@ -53371,6 +57307,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:nsba + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cgab-AFFECTS-orgf-rev: - supportBatch: True useTemplating: True @@ -53448,7 +57408,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -53484,7 +57444,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -53616,7 +57576,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -53652,7 +57612,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -53735,6 +57695,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-STIMULATES-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:elii AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased aapp_ncbigene-STIMULATES-lipd_umls: - supportBatch: True useTemplating: True @@ -53911,6 +57899,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba_umls-COEXISTS_WITH-aapp_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:aapp AND + _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' nsba_umls-COEXISTS_WITH-aapp_ncbigene-rev: - supportBatch: True useTemplating: True @@ -54063,6 +58075,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + inch-STIMULATES-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:inch AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased inpo-COEXISTS_WITH-emod: - supportBatch: True useTemplating: True @@ -54243,6 +58283,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-STIMULATES-nsba-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:phsu AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased inch-CAUSES-phsf-rev: - supportBatch: True useTemplating: True @@ -54291,6 +58359,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + horm-AUGMENTS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased aapp-AUGMENTS-inpo: - supportBatch: True useTemplating: True @@ -54460,7 +58556,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -54476,7 +58572,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -54504,7 +58600,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -54871,6 +58967,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bodm-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:bodm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Device + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' tisu-PART_OF-fngs-rev: - supportBatch: True useTemplating: True @@ -54919,6 +59039,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-PREVENTS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-PREVENTS-patf-rev: - supportBatch: True useTemplating: True @@ -54936,7 +59080,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -55159,6 +59303,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-DISRUPTS-celc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:celc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-DISRUPTS-celc-rev: - supportBatch: True useTemplating: True @@ -55207,6 +59375,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:celf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bodm-INTERACTS_WITH-inch: - supportBatch: True useTemplating: True @@ -55231,6 +59427,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:horm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-AFFECTS-comd: - supportBatch: True useTemplating: True @@ -55476,7 +59696,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -55643,6 +59863,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + nsba-ASSOCIATED_WITH-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:sosy + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nsba-ASSOCIATED_WITH-sosy-rev: - supportBatch: True useTemplating: True @@ -55791,6 +60035,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-DISRUPTS-bpoc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:bpoc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-DISRUPTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -55884,7 +60152,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -56115,6 +60383,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-CAUSES-cgab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:cgab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-AUGMENTS-fndg: - supportBatch: True useTemplating: True @@ -56251,6 +60543,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INHIBITS-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:lipd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased nsba-DISRUPTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -56316,7 +60636,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -56623,6 +60943,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-INHIBITS-nsba: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:nsba AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased hops-INHIBITS-nsba-rev: - supportBatch: True useTemplating: True @@ -56640,7 +60988,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -56747,6 +61095,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-CONVERTS_TO-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:bacs AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-CONVERTS_TO-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:orch AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' bdsu-PART_OF-aggp: - supportBatch: True useTemplating: True @@ -56843,6 +61239,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp-CONVERTS_TO-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:aapp AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cgab-COEXISTS_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -56920,7 +61340,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -56943,6 +61363,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + bacs-AUGMENTS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orgf-PRODUCES-horm: - supportBatch: True useTemplating: True @@ -56967,6 +61415,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orgf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:orgf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' comd-PROCESS_OF-emod-rev: - supportBatch: True useTemplating: True @@ -57104,7 +61576,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -57152,7 +61624,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -57187,6 +61659,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INTERACTS_WITH-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:strd + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-AUGMENTS-neop_umls-rev: - supportBatch: True useTemplating: True @@ -57215,6 +61711,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + hops-INHIBITS-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:hops AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased nusq-PART_OF-fngs: - supportBatch: True useTemplating: True @@ -57339,198 +61863,226 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased - bact-INTERACTS_WITH-virs: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Bacterium - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:virs - AND _exists_:object.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Virus - predicate: interacts_with - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - bact-INTERACTS_WITH-virs-rev: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Virus - requestBody: - body: - q: '{{ queryInputs }}' - scopes: object.umls - parameters: - fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:bact - AND _exists_:subject.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Bacterium - predicate: interacts_with - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-subj' - food-PREDISPOSES-fndg: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Food - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:fndg AND - _exists_:object.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: DiseaseOrPhenotypicFeature - predicate: predisposes_to_condition - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - food-PREDISPOSES-fndg-rev: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: DiseaseOrPhenotypicFeature - requestBody: - body: - q: '{{ queryInputs }}' - scopes: object.umls - parameters: - fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:PREDISPOSES AND subject.semantic_type_abbreviation:food AND - _exists_:subject.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Food - predicate: condition_predisposed_by - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-subj' - phsf-PRECEDES-orgf-rev: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: PhysiologicalProcess - requestBody: - body: - q: '{{ queryInputs }}' - scopes: object.umls - parameters: - fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:PRECEDES AND subject.semantic_type_abbreviation:phsf AND _exists_:subject.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: PhysiologicalProcess - predicate: preceded_by - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-subj' - aapp-PREVENTS-acab: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Polypeptide - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:PREVENTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: preventative_for_condition - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - gngm-INTERACTS_WITH-nusq: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Gene - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:nusq - AND _exists_:object.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: NucleicAcidEntity - predicate: interacts_with - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - gngm-INTERACTS_WITH-nusq-rev: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: NucleicAcidEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: object.umls - parameters: - fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:gngm - AND _exists_:subject.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Gene - predicate: interacts_with - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-subj' + bact-INTERACTS_WITH-virs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Bacterium + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:virs + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Virus + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bact-INTERACTS_WITH-virs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Virus + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:bact + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Bacterium + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + food-PREDISPOSES-fndg: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Food + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:fndg AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + food-PREDISPOSES-fndg-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND subject.semantic_type_abbreviation:food AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Food + predicate: condition_predisposed_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + phsf-PRECEDES-orgf-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: PhysiologicalProcess + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRECEDES AND subject.semantic_type_abbreviation:phsf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: preceded_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + aapp-PREVENTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Polypeptide + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-INTERACTS_WITH-nusq: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Gene + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:nusq + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-INTERACTS_WITH-nusq-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: NucleicAcidEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-STIMULATES-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:carb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased strd-AUGMENTS-dsyn-rev: - supportBatch: True useTemplating: True @@ -57987,6 +62539,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + virs-LOCATION_OF-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:virs AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Virus + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' patf-PREDISPOSES-mobd: - supportBatch: True useTemplating: True @@ -58403,6 +62979,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-DISRUPTS-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-INTERACTS_WITH-lipd: - supportBatch: True useTemplating: True @@ -58444,7 +63044,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -58523,6 +63123,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm_ncbigene-PRODUCES-horm_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:gngm AND _exists_:subject.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' elii_umls-STIMULATES-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -58580,7 +63204,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -58807,6 +63431,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + gngm_ncbigene-STIMULATES-orch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:gngm AND + _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased inch-INTERACTS_WITH-bodm-rev: - supportBatch: True useTemplating: True @@ -58927,6 +63579,58 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + strd-INTERACTS_WITH-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:strd + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs_umls-INHIBITS-aapp_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:aapp AND _exists_:object.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased lbtr-COEXISTS_WITH-lbtr: - supportBatch: True useTemplating: True @@ -59104,7 +63808,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -59164,7 +63868,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -59603,6 +64307,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-DISRUPTS-ortf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:ortf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' antb-CAUSES-sosy-rev: - supportBatch: True useTemplating: True @@ -59847,6 +64575,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-STIMULATES-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:lipd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased antb-PREDISPOSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -59995,6 +64751,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + aapp_ncbigene-INHIBITS-horm_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:aapp AND _exists_:subject.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased antb-AFFECTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -60095,6 +64879,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-DISRUPTS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nsba-AFFECTS-mobd-rev: - supportBatch: True useTemplating: True @@ -60667,6 +65475,30 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-CAUSES-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-PART_OF-emst_umls: - supportBatch: True useTemplating: True @@ -60732,7 +65564,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -60744,7 +65576,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -60768,7 +65600,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -60787,6 +65619,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-TREATS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-DISRUPTS-neop-rev: - supportBatch: True useTemplating: True @@ -60883,6 +65739,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-STIMULATES-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:horm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased horm-CONVERTS_TO-horm: - supportBatch: True useTemplating: True @@ -60972,7 +65856,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -60988,7 +65872,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -61035,6 +65919,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + emst-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:emst AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' hops_umls-INTERACTS_WITH-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -61052,7 +65960,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -61124,7 +66032,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -61232,7 +66140,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -61251,30 +66159,6 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - sbst-CAUSES-comd: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:comd AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' aapp_ncbigene-COEXISTS_WITH-lipd_umls: - supportBatch: True useTemplating: True @@ -61615,6 +66499,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-INHIBITS-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:nsba AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased gngm_ncbigene-INTERACTS_WITH-imft_umls: - supportBatch: True useTemplating: True @@ -61984,7 +66896,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -62087,6 +66999,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + lipd-STIMULATES-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:lipd AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased eico-ASSOCIATED_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -62359,6 +67299,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + gngm-STIMULATES-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:gngm AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased horm-AFFECTS-sosy-rev: - supportBatch: True useTemplating: True @@ -62383,6 +67351,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-PART_OF-fngs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:fngs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Fungus + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-fngs-rev: - supportBatch: True useTemplating: True @@ -62431,6 +67423,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-STIMULATES-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:hops AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased moft_umls-AFFECTS-aapp_ncbigene: - supportBatch: True useTemplating: True @@ -62603,6 +67623,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-INHIBITS-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:carb AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased hops-AFFECTS-inpo-rev: - supportBatch: True useTemplating: True @@ -62620,7 +67668,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -62699,6 +67747,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:lipd AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased inch-ASSOCIATED_WITH-sosy-rev: - supportBatch: True useTemplating: True @@ -63091,6 +68167,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:eico AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased celc-LOCATION_OF-phsu: - supportBatch: True useTemplating: True @@ -63635,6 +68739,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-rcpt: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:rcpt + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-INTERACTS_WITH-rcpt-rev: - supportBatch: True useTemplating: True @@ -63652,7 +68780,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -63700,7 +68828,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -63763,6 +68891,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-orgf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:orgf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased eico-STIMULATES-eico: - supportBatch: True useTemplating: True @@ -63791,6 +68947,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + eico-STIMULATES-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:eico AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased food-AFFECTS-biof: - supportBatch: True useTemplating: True @@ -64083,6 +69267,30 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-COEXISTS_WITH-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:imft AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-COEXISTS_WITH-imft-rev: - supportBatch: True useTemplating: True @@ -64392,7 +69600,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -64467,6 +69675,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased gngm_ncbigene-DISRUPTS-patf_umls-rev: - supportBatch: True useTemplating: True @@ -64515,6 +69751,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INHIBITS-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:strd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased patf-MANIFESTATION_OF-orgf: - supportBatch: True useTemplating: True @@ -64695,12 +69959,40 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased - bacs-CONVERTS_TO-gngm: + gngm_ncbigene-INHIBITS-orch_umls-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:gngm AND _exists_:subject.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased + bacs-CONVERTS_TO-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -64736,7 +70028,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -64839,30 +70131,6 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-mobd: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' bact-INTERACTS_WITH-fngs: - supportBatch: True useTemplating: True @@ -65303,6 +70571,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-ASSOCIATED_WITH-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:comd + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' strd-ASSOCIATED_WITH-sosy-rev: - supportBatch: True useTemplating: True @@ -65351,6 +70643,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-STIMULATES-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:eico AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased neop-COMPLICATES-dsyn-rev: - supportBatch: True useTemplating: True @@ -65471,6 +70791,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CAUSES-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:celf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-CAUSES-celf-rev: - supportBatch: True useTemplating: True @@ -65488,7 +70832,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -65548,7 +70892,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -65771,30 +71115,6 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-neop: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:neop AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' rcpt-INHIBITS-gngm: - supportBatch: True useTemplating: True @@ -65899,6 +71219,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' celc-LOCATION_OF-nsba: - supportBatch: True useTemplating: True @@ -66311,6 +71655,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + imft-COEXISTS_WITH-phsu-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:imft + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' eico-AFFECTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -66383,6 +71751,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + antb-INHIBITS-antb-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:antb AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased bact-LOCATION_OF-antb: - supportBatch: True useTemplating: True @@ -66991,6 +72387,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-CONVERTS_TO-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:elii AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' elii_umls-INTERACTS_WITH-aapp_ncbigene-rev: - supportBatch: True useTemplating: True @@ -67135,6 +72555,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + carb-CONVERTS_TO-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:carb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-CONVERTS_TO-carb-rev: - supportBatch: True useTemplating: True @@ -67304,7 +72748,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -67831,12 +73275,36 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-AFFECTS-emst: + rcpt-INTERACTS_WITH-orch-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:rcpt + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-emst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -68363,6 +73831,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-bpoc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:bpoc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -68380,7 +73876,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -68391,6 +73887,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + carb-INTERACTS_WITH-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:imft + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-INTERACTS_WITH-imft-rev: - supportBatch: True useTemplating: True @@ -68775,6 +74295,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-PART_OF-emst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:emst AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' tisu-LOCATION_OF-antb: - supportBatch: True useTemplating: True @@ -68799,6 +74343,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-PREVENTS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' patf-MANIFESTATION_OF-celf: - supportBatch: True useTemplating: True @@ -68943,6 +74511,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + carb-INHIBITS-carb-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:carb AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased comd-OCCURS_IN-neop: - supportBatch: True useTemplating: True @@ -69056,7 +74652,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -69068,7 +74664,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -69087,6 +74683,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:horm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' anst-LOCATION_OF-orch-rev: - supportBatch: True useTemplating: True @@ -69135,6 +74755,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-antb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:antb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-PREDISPOSES-patf-rev: - supportBatch: True useTemplating: True @@ -69152,7 +74796,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -69255,12 +74899,60 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-STIMULATES-imft: + celc-PRODUCES-orch-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:celc AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-nsba: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:nsba AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-STIMULATES-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -69300,7 +74992,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -69588,7 +75280,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -69755,6 +75447,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:hops AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased cgab-LOCATION_OF-virs: - supportBatch: True useTemplating: True @@ -70359,6 +76079,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' strd-AFFECTS-patf-rev: - supportBatch: True useTemplating: True @@ -70383,6 +76127,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-emst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:emst AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' phsu-COEXISTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -70611,12 +76379,36 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-COEXISTS_WITH-eico: + imft-INTERACTS_WITH-carb-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:imft + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -70896,7 +76688,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -70947,6 +76739,58 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + gngm-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:gngm AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased + bacs-DISRUPTS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' anst-PART_OF-neop: - supportBatch: True useTemplating: True @@ -71000,7 +76844,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -71208,7 +77052,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -71603,6 +77447,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + tisu-PRODUCES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:tisu AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nusq-PART_OF-emst: - supportBatch: True useTemplating: True @@ -71848,7 +77716,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -71884,7 +77752,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -71956,7 +77824,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -72028,7 +77896,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -72044,7 +77912,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -72067,6 +77935,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + celf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:celf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-PART_OF-neop_umls-rev: - supportBatch: True useTemplating: True @@ -72411,6 +78303,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased aapp_ncbigene-PREDISPOSES-mobd_umls: - supportBatch: True useTemplating: True @@ -72548,7 +78468,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -72576,7 +78496,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -73204,7 +79124,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -73396,7 +79316,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -73432,7 +79352,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -73463,6 +79383,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-phsf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:phsf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased patf-PRODUCES-bdsu: - supportBatch: True useTemplating: True @@ -73640,7 +79588,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -73687,6 +79635,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-DISRUPTS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-DISRUPTS-sosy-rev: - supportBatch: True useTemplating: True @@ -73704,7 +79676,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -73948,7 +79920,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -74003,6 +79975,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + strd-COEXISTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:strd + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' opco-DISRUPTS-orgf-rev: - supportBatch: True useTemplating: True @@ -74299,6 +80295,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + patf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:patf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-AFFECTS-sosy_umls-rev: - supportBatch: True useTemplating: True @@ -74468,7 +80488,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -74616,7 +80636,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -74695,6 +80715,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:horm AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased strd_umls-STIMULATES-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -74967,6 +81015,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + eico-CONVERTS_TO-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:eico AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-PRODUCES-strd: - supportBatch: True useTemplating: True @@ -75128,7 +81200,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -75339,6 +81411,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + aapp_ncbigene-PRODUCES-bacs_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:aapp AND _exists_:subject.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' imft-ASSOCIATED_WITH-inpo: - supportBatch: True useTemplating: True @@ -75731,6 +81827,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-COEXISTS_WITH-nusq: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:nusq AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-COEXISTS_WITH-nusq-rev: - supportBatch: True useTemplating: True @@ -75796,7 +81916,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -75832,7 +81952,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -75844,7 +81964,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: close_match source: "infores:semmeddb" knowledge_level: not_provided @@ -75856,7 +81976,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -75868,7 +81988,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: close_match source: "infores:semmeddb" knowledge_level: not_provided @@ -76312,7 +82432,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -76728,7 +82848,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -76740,7 +82860,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -76915,6 +83035,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-PREDISPOSES-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:mobd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-TREATS-virs-rev: - supportBatch: True useTemplating: True @@ -77032,13 +83176,37 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_input source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + topp-USES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:USES AND subject.semantic_type_abbreviation:topp AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Procedure + predicate: is_input_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' sosy-COEXISTS_WITH-comd: - supportBatch: True useTemplating: True @@ -77311,6 +83479,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-STIMULATES-antb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:antb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased rcpt-INTERACTS_WITH-horm: - supportBatch: True useTemplating: True @@ -77335,6 +83531,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INHIBITS-antb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:antb AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased carb-AFFECTS-celc-rev: - supportBatch: True useTemplating: True @@ -77467,6 +83691,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + elii-AUGMENTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased elii-AUGMENTS-acab-rev: - supportBatch: True useTemplating: True @@ -77495,6 +83747,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-COEXISTS_WITH-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:strd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' imft-PREDISPOSES-neop: - supportBatch: True useTemplating: True @@ -77660,7 +83936,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -77996,7 +84272,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -78056,7 +84332,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -78280,7 +84556,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -78316,7 +84592,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -78464,7 +84740,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -78643,6 +84919,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + antb-STIMULATES-antb-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:antb AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased anab-LOCATION_OF-bact: - supportBatch: True useTemplating: True @@ -78852,7 +85156,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -78972,7 +85276,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -78984,7 +85288,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -79075,6 +85379,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-STIMULATES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:carb AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased aapp_ncbigene-STIMULATES-carb_umls: - supportBatch: True useTemplating: True @@ -79180,7 +85512,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -79216,7 +85548,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -79388,7 +85720,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -79795,6 +86127,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + lipd-CONVERTS_TO-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:lipd AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' dsyn-AFFECTS-virs-rev: - supportBatch: True useTemplating: True @@ -79867,6 +86223,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-STIMULATES-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:imft AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orch-STIMULATES-imft-rev: - supportBatch: True useTemplating: True @@ -80160,7 +86544,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -80256,7 +86640,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -80347,6 +86731,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-AUGMENTS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-sosy-rev: - supportBatch: True useTemplating: True @@ -80364,7 +86776,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -80519,6 +86931,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:cell AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-cell-rev: - supportBatch: True useTemplating: True @@ -80536,7 +86976,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -80672,7 +87112,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -80708,7 +87148,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -80844,7 +87284,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -80892,7 +87332,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -81064,7 +87504,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -81088,7 +87528,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -81100,13 +87540,61 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-CONVERTS_TO-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:hops AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + eico-COEXISTS_WITH-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:eico + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' lbtr-PREDISPOSES-neop: - supportBatch: True useTemplating: True @@ -81256,7 +87744,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -81296,7 +87784,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -81699,6 +88187,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + inch-CONVERTS_TO-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:inch AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + ortf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:ortf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cgab-MANIFESTATION_OF-dsyn-rev: - supportBatch: True useTemplating: True @@ -81948,7 +88484,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -82187,6 +88723,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + bacs-CONVERTS_TO-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:eico AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' patf-PRODUCES-enzy: - supportBatch: True useTemplating: True @@ -82264,7 +88824,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -82304,7 +88864,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -82559,6 +89119,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-CONVERTS_TO-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:elii AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' carb-INTERACTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -82607,6 +89191,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + eico-INHIBITS-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:eico AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased carb-TREATS-patf-rev: - supportBatch: True useTemplating: True @@ -83071,6 +89683,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:imft AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-imft-rev: - supportBatch: True useTemplating: True @@ -83088,7 +89728,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -83200,7 +89840,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -84356,7 +90996,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -84511,6 +91151,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-tisu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:tisu AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased anst-LOCATION_OF-virs: - supportBatch: True useTemplating: True @@ -84703,6 +91371,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-DISRUPTS-tisu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:tisu AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-COEXISTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -84727,6 +91419,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-fndg: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:fndg AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-fndg-rev: - supportBatch: True useTemplating: True @@ -84744,7 +91464,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -84779,12 +91499,12 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - eico-INHIBITS-aapp-rev: + opco-INTERACTS_WITH-orch-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: Polypeptide + semantic: SmallMolecule requestBody: body: q: '{{ queryInputs }}' @@ -84792,45 +91512,45 @@ x-bte-kgs-operations: parameters: fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:eico AND _exists_:subject.umls - AND pmid_count:>3 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:opco + AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS semantic: SmallMolecule - predicate: affected_by + predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - qualifiers: - qualified_predicate: caused_by - subject_aspect_qualifier: activity_or_abundance - subject_direction_qualifier: decreased - sbst-CAUSES-acab: + eico-INHIBITS-aapp-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: ChemicalEntity + semantic: Polypeptide requestBody: body: q: '{{ queryInputs }}' - scopes: subject.umls + scopes: object.umls parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:eico AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: Disease - predicate: causes + semantic: SmallMolecule + predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased nnon-INHIBITS-gngm-rev: - supportBatch: True useTemplating: True @@ -84883,6 +91603,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + eico-COEXISTS_WITH-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:eico AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-STIMULATES-nusq: - supportBatch: True useTemplating: True @@ -85011,6 +91755,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + phsf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:phsf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' bact-LOCATION_OF-opco: - supportBatch: True useTemplating: True @@ -85235,6 +92003,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + lipd-PART_OF-anst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:anst AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: AnatomicalEntity + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-anst-rev: - supportBatch: True useTemplating: True @@ -85455,6 +92247,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + imft-STIMULATES-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:imft AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased bodm-INTERACTS_WITH-phsu: - supportBatch: True useTemplating: True @@ -85768,7 +92588,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -85864,7 +92684,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -85892,7 +92712,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -86464,7 +93284,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -86643,6 +93463,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-CONVERTS_TO-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:gngm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' phsu-CONVERTS_TO-gngm-rev: - supportBatch: True useTemplating: True @@ -86667,6 +93511,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-TREATS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-TREATS-patf-rev: - supportBatch: True useTemplating: True @@ -86684,7 +93552,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: subject_of_treatment_application_or_study_for_treatment_by source: "infores:semmeddb" knowledge_level: not_provided @@ -87003,6 +93871,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + inch-COEXISTS_WITH-rcpt: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:rcpt AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-COEXISTS_WITH-rcpt-rev: - supportBatch: True useTemplating: True @@ -87347,6 +94239,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + nusq-COEXISTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:nusq + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-CONVERTS_TO-gngm: - supportBatch: True useTemplating: True @@ -87448,7 +94364,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -87484,7 +94400,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -87496,7 +94412,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -87791,12 +94707,36 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-CAUSES-anab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:anab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PRODUCES-bacs: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -87808,7 +94748,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -87820,7 +94760,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -87832,7 +94772,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produced_by source: "infores:semmeddb" knowledge_level: not_provided @@ -87935,6 +94875,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-fndg: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:fndg AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-AFFECTS-fndg-rev: - supportBatch: True useTemplating: True @@ -87952,7 +94916,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -88439,6 +95403,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + strd-INHIBITS-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:strd AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased phsu_ncbigene-STIMULATES-gngm_umls-rev: - supportBatch: True useTemplating: True @@ -88912,7 +95904,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_input source: "infores:semmeddb" knowledge_level: not_provided @@ -89075,6 +96067,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + carb-CONVERTS_TO-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:carb AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' irda-INTERACTS_WITH-rcpt: - supportBatch: True useTemplating: True @@ -89759,6 +96775,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' strd-AFFECTS-sosy-rev: - supportBatch: True useTemplating: True @@ -89800,7 +96840,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -89835,6 +96875,34 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-STIMULATES-nusq: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:nusq AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-STIMULATES-nusq-rev: - supportBatch: True useTemplating: True @@ -89852,7 +96920,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -89863,6 +96931,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + nnon-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:nnon + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-DISRUPTS-sosy_umls: - supportBatch: True useTemplating: True @@ -89959,12 +97051,36 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - bacs-CONVERTS_TO-imft: + opco-COEXISTS_WITH-bacs-rev: - supportBatch: True useTemplating: True inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:opco + AND _exists_:subject.umls AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CONVERTS_TO-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -90000,13 +97116,37 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CONVERTS_TO-inch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:inch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-PRODUCES-eico_umls: - supportBatch: True useTemplating: True @@ -90260,7 +97400,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -90300,7 +97440,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -90328,7 +97468,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -90344,7 +97484,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -90380,7 +97520,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -90392,7 +97532,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -90428,7 +97568,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -90628,7 +97768,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -90848,7 +97988,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -90860,7 +98000,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -90972,7 +98112,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -91092,7 +98232,7 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -91171,6 +98311,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + strd-STIMULATES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:strd AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased imft-ASSOCIATED_WITH-sosy: - supportBatch: True useTemplating: True @@ -91560,7 +98728,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -91831,6 +98999,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-PREDISPOSES-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:sosy AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PREDISPOSES-sosy-rev: - supportBatch: True useTemplating: True @@ -91848,7 +99040,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -92459,6 +99651,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + phsu-STIMULATES-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:strd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs_ncbigene-INTERACTS_WITH-aapp_umls-rev: - supportBatch: True useTemplating: True @@ -92511,6 +99731,54 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-CONVERTS_TO-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:horm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-TREATS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' comd-PRECEDES-comd-rev: - supportBatch: True useTemplating: True @@ -92608,7 +99876,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -92719,6 +99987,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + opco-INTERACTS_WITH-opco: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:opco + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-AUGMENTS-mobd: - supportBatch: True useTemplating: True @@ -92943,6 +100235,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + enzy-INTERACTS_WITH-nnon-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:enzy + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm_ncbigene-AFFECTS-biof_umls-rev: - supportBatch: True useTemplating: True @@ -93084,13 +100400,37 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-CONVERTS_TO-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:hops AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm-AUGMENTS-sosy-rev: - supportBatch: True useTemplating: True @@ -93356,7 +100696,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -93380,7 +100720,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -93396,7 +100736,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -93591,6 +100931,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + bacs-CONVERTS_TO-phsu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:phsu AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' irda-INTERACTS_WITH-gngm: - supportBatch: True useTemplating: True @@ -93951,6 +101315,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + elii-STIMULATES-enzy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:enzy AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased elii-STIMULATES-enzy-rev: - supportBatch: True useTemplating: True @@ -95148,7 +102540,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -95184,7 +102576,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produced_by source: "infores:semmeddb" knowledge_level: not_provided @@ -95611,6 +103003,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-STIMULATES-moft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:moft AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: MolecularActivity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-STIMULATES-moft-rev: - supportBatch: True useTemplating: True @@ -95628,7 +103048,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -95891,6 +103311,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + bacs-AUGMENTS-celc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:celc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-celc-rev: - supportBatch: True useTemplating: True @@ -95908,7 +103356,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -96668,7 +104116,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -96728,13 +104176,37 @@ x-bte-kgs-operations: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + phsf-ASSOCIATED_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND subject.semantic_type_abbreviation:phsf + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' phsu-COEXISTS_WITH-nnon: - supportBatch: True useTemplating: True @@ -96964,7 +104436,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -97000,7 +104472,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -97012,7 +104484,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -97848,7 +105320,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -97884,7 +105356,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -98375,6 +105847,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + bacs-PREVENTS-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' elii-DISRUPTS-biof-rev: - supportBatch: True useTemplating: True @@ -98488,13 +105984,37 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + irda-COEXISTS_WITH-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:irda + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiagnosticAid + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' patf-COMPLICATES-neop: - supportBatch: True useTemplating: True @@ -99048,7 +106568,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -99088,7 +106608,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -99247,6 +106767,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + imft-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:imft AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased nsba-TREATS-patf-rev: - supportBatch: True useTemplating: True @@ -99391,6 +106939,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nnon-PART_OF-virs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:virs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Virus + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-PART_OF-virs-rev: - supportBatch: True useTemplating: True @@ -99415,6 +106987,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-PART_OF-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:aapp AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-PART_OF-aapp-rev: - supportBatch: True useTemplating: True @@ -99487,6 +107083,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-TREATS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' rcpt-INTERACTS_WITH-strd: - supportBatch: True useTemplating: True @@ -99611,6 +107231,54 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + bacs-CAUSES-phsf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:phsf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-AFFECTS-cgab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:cgab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-INTERACTS_WITH-enzy_umls: - supportBatch: True useTemplating: True @@ -99752,7 +107420,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -100588,7 +108256,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -100983,6 +108651,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + hops-PREVENTS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm-AUGMENTS-anab: - supportBatch: True useTemplating: True @@ -101028,7 +108720,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -101055,12 +108747,60 @@ x-bte-kgs-operations: filter: predicate:same_as AND object.semantic_type_abbreviation:hops AND _exists_:object.umls AND pmid_count:>3 outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: close_match + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-same_as-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:same_as AND subject.semantic_type_abbreviation:orch AND _exists_:subject.umls + AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule predicate: close_match source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-INTERACTS_WITH-enzy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:enzy + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' irda_umls-INHIBITS-gngm_ncbigene: @@ -101359,6 +109099,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-ADMINISTERED_TO-aggp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ADMINISTERED_TO AND object.semantic_type_abbreviation:aggp + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cohort + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-ADMINISTERED_TO-aggp-rev: - supportBatch: True useTemplating: True @@ -101376,7 +109140,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -101416,7 +109180,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -101435,6 +109199,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-nnon: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:nnon AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-INTERACTS_WITH-imft-rev: - supportBatch: True useTemplating: True @@ -101651,30 +109439,6 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-anab: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:anab AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: PhenotypicFeature - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' sbst-CAUSES-anab-rev: - supportBatch: True useTemplating: True @@ -102152,7 +109916,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -102168,7 +109932,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -102288,13 +110052,37 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-anab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:anab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' imft-INTERACTS_WITH-antb: - supportBatch: True useTemplating: True @@ -103523,6 +111311,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-fndg: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:fndg AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-fndg-rev: - supportBatch: True useTemplating: True @@ -103540,7 +111356,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -103623,6 +111439,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + rcpt-COEXISTS_WITH-elii-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:rcpt + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nsba-DISRUPTS-mobd-rev: - supportBatch: True useTemplating: True @@ -103728,7 +111568,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -103907,6 +111747,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + inch-AFFECTS-anst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:anst AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: AnatomicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-AFFECTS-anst-rev: - supportBatch: True useTemplating: True @@ -104267,6 +112131,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-AFFECTS-emod: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:emod AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-AFFECTS-emod-rev: - supportBatch: True useTemplating: True @@ -104284,7 +112172,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -104488,7 +112376,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -104500,13 +112388,37 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: part_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-PART_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND subject.semantic_type_abbreviation:bacs AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: has_part + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' imft-INHIBITS-lipd: - supportBatch: True useTemplating: True @@ -104583,6 +112495,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-ortf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:ortf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-ortf-rev: - supportBatch: True useTemplating: True @@ -104600,7 +112540,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -104656,7 +112596,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -104687,6 +112627,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + bacs-TREATS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-TREATS-sosy-rev: - supportBatch: True useTemplating: True @@ -104704,7 +112668,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: subject_of_treatment_application_or_study_for_treatment_by source: "infores:semmeddb" knowledge_level: not_provided @@ -104776,7 +112740,7 @@ x-bte-kgs-operations: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -104848,7 +112812,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -105188,7 +113152,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -105263,6 +113227,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + lipd-CONVERTS_TO-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:lipd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bact-PRODUCES-orch: - supportBatch: True useTemplating: True @@ -105287,6 +113275,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bact-PRODUCES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:bact AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Bacterium + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-PRODUCES-phsu: - supportBatch: True useTemplating: True @@ -105687,6 +113699,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-TREATS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nusq-AUGMENTS-orgf: - supportBatch: True useTemplating: True @@ -105835,6 +113871,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp_ncbigene-CONVERTS_TO-orch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:aapp AND + _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' opco-INHIBITS-aapp-rev: - supportBatch: True useTemplating: True @@ -106172,7 +114232,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -106188,7 +114248,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -106264,7 +114324,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -106352,7 +114412,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -106364,7 +114424,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -106507,6 +114567,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + strd-PART_OF-aggp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:aggp AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cohort + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' strd-PART_OF-aggp-rev: - supportBatch: True useTemplating: True @@ -106531,6 +114615,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-PREVENTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' cell_umls-LOCATION_OF-bacs_ncbigene: - supportBatch: True useTemplating: True @@ -106971,6 +115079,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + rcpt-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:rcpt AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased dsyn-COEXISTS_WITH-moft: - supportBatch: True useTemplating: True @@ -107019,6 +115155,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + anst-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:anst AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: AnatomicalEntity + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' ortf-PRODUCES-aapp-rev: - supportBatch: True useTemplating: True @@ -107507,6 +115667,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-INHIBITS-nusq: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:nusq AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased orch-INHIBITS-nusq-rev: - supportBatch: True useTemplating: True @@ -108063,12 +116251,12 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-cgab: + fngs-INTERACTS_WITH-virs: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: ChemicalEntity + semantic: Fungus requestBody: body: q: '{{ queryInputs }}' @@ -108076,47 +116264,47 @@ x-bte-kgs-operations: parameters: fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:cgab AND _exists_:object.umls - AND pmid_count:>3 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:virs + AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: Disease - predicate: causes + semantic: Virus + predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - fngs-INTERACTS_WITH-virs: + fngs-INTERACTS_WITH-virs-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: Fungus + semantic: Virus requestBody: body: q: '{{ queryInputs }}' - scopes: subject.umls + scopes: object.umls parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:virs - AND _exists_:object.umls AND pmid_count:>3 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:fngs + AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: Virus + semantic: Fungus predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - fngs-INTERACTS_WITH-virs-rev: + $ref: '#/components/x-bte-response-mapping/umls-subj' + enzy-COEXISTS_WITH-elii-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: Virus + semantic: SmallMolecule requestBody: body: q: '{{ queryInputs }}' @@ -108124,12 +116312,12 @@ x-bte-kgs-operations: parameters: fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:fngs + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:enzy AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: Fungus - predicate: interacts_with + semantic: Protein + predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent @@ -109055,6 +117243,30 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-PREVENTS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PREVENTS-sosy-rev: - supportBatch: True useTemplating: True @@ -109072,7 +117284,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -109640,7 +117852,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -110148,7 +118360,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -110444,7 +118656,7 @@ x-bte-kgs-operations: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -110492,7 +118704,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -110691,6 +118903,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + nsba-CONVERTS_TO-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:nsba AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' mobd-PRODUCES-tisu-rev: - supportBatch: True useTemplating: True @@ -110732,13 +118968,37 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: precedes source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + topp-PRECEDES-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRECEDES AND subject.semantic_type_abbreviation:topp AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Procedure + predicate: preceded_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' topp-PRECEDES-antb: - supportBatch: True useTemplating: True @@ -110787,6 +119047,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + phsu-STIMULATES-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:cell AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased phsu-STIMULATES-cell-rev: - supportBatch: True useTemplating: True @@ -111104,7 +119392,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -111228,7 +119516,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -111315,6 +119603,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + diap-USES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:USES AND subject.semantic_type_abbreviation:diap AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Procedure + predicate: is_input_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' lbtr-MANIFESTATION_OF-inpo: - supportBatch: True useTemplating: True @@ -111984,7 +120296,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -112020,7 +120332,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -112099,6 +120411,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-STIMULATES-rcpt: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:rcpt AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased lipd-CAUSES-celf-rev: - supportBatch: True useTemplating: True @@ -112140,7 +120480,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -112248,7 +120588,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -112359,6 +120699,34 @@ x-bte-kgs-operations: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + nusq-INHIBITS-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:nusq AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased nnon-PART_OF-bact-rev: - supportBatch: True useTemplating: True @@ -112536,7 +120904,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -112631,6 +120999,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + biof-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:biof AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Phenomenon + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' enzy-ASSOCIATED_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -112760,7 +121152,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -112851,6 +121243,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + mobd-PRODUCES-nsba-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:mobd AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' neop-CAUSES-patf-rev: - supportBatch: True useTemplating: True @@ -113483,6 +121899,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs_umls-INHIBITS-bacs_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:bacs AND _exists_:object.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bpoc-LOCATION_OF-rcpt: - supportBatch: True useTemplating: True @@ -113507,6 +121951,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INHIBITS-enzy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:enzy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-enzy-rev: - supportBatch: True useTemplating: True @@ -113524,7 +121996,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -113592,7 +122064,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -113628,7 +122100,7 @@ x-bte-kgs-operations: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -113784,7 +122256,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -113932,7 +122404,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -113992,7 +122464,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -114080,7 +122552,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -114216,7 +122688,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: precedes source: "infores:semmeddb" knowledge_level: not_provided @@ -114415,6 +122887,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-CONVERTS_TO-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:gngm AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nusq-CONVERTS_TO-nusq: - supportBatch: True useTemplating: True @@ -114511,12 +123007,36 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - phsu-PRODUCES-bacs-rev: + phsu-PRODUCES-bacs: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND object.semantic_type_abbreviation:bacs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: produces + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + phsu-PRODUCES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -114703,6 +123223,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm_ncbigene-CONVERTS_TO-inch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:gngm AND + _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' rcpt-ASSOCIATED_WITH-sosy: - supportBatch: True useTemplating: True @@ -114780,7 +123324,7 @@ x-bte-kgs-operations: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -114935,6 +123479,54 @@ x-bte-kgs-operations: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + carb-same_as-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:same_as AND object.semantic_type_abbreviation:bacs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: close_match + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + carb-same_as-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:same_as AND subject.semantic_type_abbreviation:carb AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: close_match + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' horm-COEXISTS_WITH-rcpt-rev: - supportBatch: True useTemplating: True @@ -115187,6 +123779,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + bacs-AUGMENTS-biof: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:biof AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Phenomenon + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-biof-rev: - supportBatch: True useTemplating: True @@ -115204,7 +123824,7 @@ x-bte-kgs-operations: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -115311,6 +123931,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-COEXISTS_WITH-opco: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:opco AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-TREATS-patf-rev: - supportBatch: True useTemplating: True @@ -115843,6 +124487,34 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + opco-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:opco AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased fngs-LOCATION_OF-eico: - supportBatch: True useTemplating: True @@ -116243,6 +124915,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-CONVERTS_TO-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:strd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' topp-COMPLICATES-orgf: - supportBatch: True useTemplating: True @@ -116967,6 +125663,30 @@ x-bte-kgs-operations: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-CONVERTS_TO-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:horm AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nsba-DISRUPTS-celc-rev: - supportBatch: True useTemplating: True diff --git a/semmeddb/smartapi.yaml b/semmeddb/smartapi.yaml index 28b31a1d..497962be 100644 --- a/semmeddb/smartapi.yaml +++ b/semmeddb/smartapi.yaml @@ -19,7 +19,7 @@ info: component: KP team: - Service Provider - biolink-version: "4.1.6" + biolink-version: "4.2.1" servers: - description: Production server url: https://biothings.ncats.io/semmeddb @@ -416,6 +416,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-aapp' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-orch' + - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-celc' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-celc-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-topp' @@ -444,6 +445,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-aapp' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-bacs' + - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/dsyn-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-celf' @@ -618,6 +620,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_umls-INTERACTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-ortf' + - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-gngm' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/patf-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/patf-CAUSES-dsyn-rev' @@ -676,9 +679,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-inch' - $ref: '#/components/x-bte-kgs-operations/topp-USES-lipd' + - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-gngm' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-orch' + - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-celf' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/emst-LOCATION_OF-aapp-rev' @@ -780,6 +786,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-blor_umls-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-virs-rev' + - $ref: '#/components/x-bte-kgs-operations/nsba-PART_OF-bpoc' - $ref: '#/components/x-bte-kgs-operations/nsba-PART_OF-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-celf' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-celf-rev' @@ -860,6 +867,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/neop-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-acab' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-acab-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/comd-COEXISTS_WITH-neop-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bact' @@ -874,6 +882,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bacs-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-aapp_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-aapp_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-STIMULATES-gngm_ncbigene-rev' @@ -884,6 +893,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-lipd' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-fndg' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-fndg-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-COEXISTS_WITH-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-lipd' @@ -911,6 +921,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/celc-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-bacs' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-bacs' + - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/orch_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/orch_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-virs' @@ -932,6 +945,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/celf-PROCESS_OF-bact' - $ref: '#/components/x-bte-kgs-operations/celf-PROCESS_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-orch' + - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-bact_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-bact_umls-rev' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-cell' @@ -944,6 +958,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-orgf-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-celf' - $ref: '#/components/x-bte-kgs-operations/food-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/food-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/neop-CAUSES-dsyn-rev' @@ -987,11 +1002,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/horm-INTERACTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-ortf' + - $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-dsyn' - $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-ortf' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/phsu-INTERACTS_WITH-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-inch' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-COEXISTS_WITH-inpo' @@ -1034,6 +1052,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/inpo-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/inpo-CAUSES-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-bacs' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-TREATS-inpo' - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-gngm-rev' @@ -1044,7 +1063,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/diap-DIAGNOSES-cgab' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-celf' - $ref: '#/components/x-bte-kgs-operations/aapp-CAUSES-inpo' + - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-bact' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-bact-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-bacs' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-dsyn-rev' @@ -1061,7 +1082,10 @@ paths: - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-moft_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-moft_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-celf' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-celf-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-bacs' + - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-bsoj' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-bsoj-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bacs_umls' @@ -1074,6 +1098,8 @@ paths: - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-strd' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-cell' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-cell-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-orch' + - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-dsyn' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-gngm-rev' @@ -1086,6 +1112,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/hops-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/cell_umls-LOCATION_OF-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-neop' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-ortf' - $ref: '#/components/x-bte-kgs-operations/orch-CAUSES-comd' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-carb' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-orch' @@ -1100,17 +1127,20 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-bact' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-bact-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-phsu' + - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-phsu-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-cell' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-cell-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-TREATS-virs' - $ref: '#/components/x-bte-kgs-operations/phsu-TREATS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-bact_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-inpo' - $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-PRECEDES-orgf' - $ref: '#/components/x-bte-kgs-operations/orgf-PRECEDES-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-ASSOCIATED_WITH-fndg' - $ref: '#/components/x-bte-kgs-operations/bdsu-ASSOCIATED_WITH-fndg-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-celc' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-celc-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-celf' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-celf-rev' @@ -1118,11 +1148,15 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-LOCATION_OF-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-bacs_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-orch' + - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-orch-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-comd' - $ref: '#/components/x-bte-kgs-operations/sosy-PROCESS_OF-aggp' - $ref: '#/components/x-bte-kgs-operations/sosy-PROCESS_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-virs-rev' + - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-moft' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-dsyn' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-dsyn-rev' @@ -1156,10 +1190,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bsoj' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bsoj-rev' + - $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-moft' - $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-moft-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs_umls-INHIBITS-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/bact-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/bact-PRODUCES-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-orgf' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-orga' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-orga-rev' - $ref: '#/components/x-bte-kgs-operations/orch-PREVENTS-patf' @@ -1185,6 +1222,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/hops-ASSOCIATED_WITH-neop-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PREVENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-bacs' + - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-diap' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-diap-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-neop' @@ -1208,6 +1246,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/fndg-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-celf' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-celf-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-gngm-rev' @@ -1251,6 +1290,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-celf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-bact' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-bact-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-orch' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-gngm_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-gngm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-gngm-rev' @@ -1267,6 +1307,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bacs_ncbigene-PART_OF-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/aapp-ASSOCIATED_WITH-sosy-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/inch-CAUSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-moft' @@ -1284,6 +1325,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-ortf' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-celc' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-celc-rev' + - $ref: '#/components/x-bte-kgs-operations/nnon-ADMINISTERED_TO-cell' - $ref: '#/components/x-bte-kgs-operations/nnon-ADMINISTERED_TO-cell-rev' - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-sosy' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-aapp' @@ -1295,6 +1337,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/antb-CAUSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-horm' + - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-tisu' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-aapp' @@ -1316,6 +1359,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-TREATS-dsyn_umls' - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-TREATS-dsyn_umls-rev' - $ref: '#/components/x-bte-kgs-operations/cgab-COEXISTS_WITH-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-aapp' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-aapp-rev' @@ -1326,6 +1370,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-strd' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-bacs' + - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-neop_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-neop_umls-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-PROCESS_OF-aggp' @@ -1335,6 +1380,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orch-PREVENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/topp-TREATS-virs' - $ref: '#/components/x-bte-kgs-operations/topp-TREATS-virs-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-moft' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/tisu-PRODUCES-aapp-rev' @@ -1363,6 +1409,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/dsyn-ASSOCIATED_WITH-moft-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-ASSOCIATED_WITH-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-ortf' + - $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-neop' - $ref: '#/components/x-bte-kgs-operations/cgab-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-gngm-rev' @@ -1397,11 +1444,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-ASSOCIATED_WITH-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-gngm' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-gngm-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-cell' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-orch' + - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-inch' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-patf' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-COMPLICATES-dsyn' - $ref: '#/components/x-bte-kgs-operations/dsyn-COMPLICATES-dsyn-rev' @@ -1410,11 +1460,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-tisu_umls' - $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-COEXISTS_WITH-phsf' + - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/horm_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-ASSOCIATED_WITH-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-INTERACTS_WITH-gngm_ncbigene' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-ortf' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-ortf-rev' + - $ref: '#/components/x-bte-kgs-operations/phsu-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/horm-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/moft-AFFECTS-orgf' @@ -1483,8 +1536,11 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-cgab' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-phsu' + - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/hops-INTERACTS_WITH-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-bsoj' - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-bsoj-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-ortf_umls' @@ -1497,6 +1553,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bsoj-LOCATION_OF-bdsu' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-tisu' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-gngm' @@ -1509,9 +1566,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-patf' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-phsf' + - $ref: '#/components/x-bte-kgs-operations/orch-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/phsu-TREATS-acab' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-inpo' + - $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-neop' - $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-ASSOCIATED_WITH-patf_umls-rev' @@ -1546,6 +1606,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-phsu-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/antb-INTERACTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/antb-INTERACTS_WITH-antb-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-PRECEDES-mobd' @@ -1553,6 +1614,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/virs-COEXISTS_WITH-virs-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-eico' - $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-bpoc-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-sosy' - $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-bacs-rev' @@ -1567,7 +1629,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-irda' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-acab' + - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-phsu' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-orch' + - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-emst' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-phsf' - $ref: '#/components/x-bte-kgs-operations/phsu-INHIBITS-bacs-rev' @@ -1575,6 +1639,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-nsba' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-orch' + - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PRECEDES-neop' - $ref: '#/components/x-bte-kgs-operations/neop-PRECEDES-neop-rev' @@ -1596,6 +1661,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/elii-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-dsyn-rev' @@ -1623,6 +1689,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/food-PREDISPOSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/food-PREDISPOSES-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-inch' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-orgf_umls' - $ref: '#/components/x-bte-kgs-operations/mobd-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/mobd-AFFECTS-mobd-rev' @@ -1632,6 +1699,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-nusq' - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/strd-TREATS-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/orch_umls-INTERACTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/orch_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-bpoc_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-bpoc_umls-rev' @@ -1654,12 +1722,16 @@ paths: - $ref: '#/components/x-bte-kgs-operations/emst-PART_OF-cell' - $ref: '#/components/x-bte-kgs-operations/emst-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-bacs' + - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd-STIMULATES-aapp' - $ref: '#/components/x-bte-kgs-operations/lipd-STIMULATES-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-elii-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-emod' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-emod-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-AUGMENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/dsyn-AUGMENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-acab' + - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-bacs_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-bacs_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-PART_OF-tisu' @@ -1700,6 +1772,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-orch' + - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-bacs_umls-rev' @@ -1712,15 +1785,18 @@ paths: - $ref: '#/components/x-bte-kgs-operations/mobd-OCCURS_IN-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/hops_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-antb' + - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-cell' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/medd-TREATS-mobd' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-bact' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-bact-rev' - $ref: '#/components/x-bte-kgs-operations/cell-INTERACTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/cell-INTERACTS_WITH-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-dsyn' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/orch_umls-INTERACTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/dora-TREATS-sosy' - $ref: '#/components/x-bte-kgs-operations/dora-TREATS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/antb-COEXISTS_WITH-antb' @@ -1732,6 +1808,8 @@ paths: - $ref: '#/components/x-bte-kgs-operations/inch-AUGMENTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-moft' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-moft-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-COEXISTS_WITH-hops' + - $ref: '#/components/x-bte-kgs-operations/hops-COEXISTS_WITH-hops-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-orgf_umls' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-bacs-rev' @@ -1742,6 +1820,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/ortf-AFFECTS-orga-rev' - $ref: '#/components/x-bte-kgs-operations/hops-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-horm_umls' + - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-horm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-DISRUPTS-cell' - $ref: '#/components/x-bte-kgs-operations/dsyn-DISRUPTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-bacs' @@ -1757,11 +1836,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-ortf' - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-horm_umls' + - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-horm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/antb-DISRUPTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bacs' + - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu_umls-LOCATION_OF-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-patf_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-patf_umls-rev' @@ -1771,6 +1852,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/neop_umls-PRODUCES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/neop_umls-PRODUCES-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-aapp' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-ASSOCIATED_WITH-comd' - $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-bacs' @@ -1783,6 +1865,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-acab' - $ref: '#/components/x-bte-kgs-operations/mobd-AFFECTS-orgf-rev' + - $ref: '#/components/x-bte-kgs-operations/nsba-ASSOCIATED_WITH-mobd' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-orga-rev' @@ -1799,6 +1882,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/medd-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/medd-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-orch_umls' + - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-orch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/mobd-MANIFESTATION_OF-dsyn' - $ref: '#/components/x-bte-kgs-operations/mobd-MANIFESTATION_OF-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-aapp' @@ -1871,19 +1955,23 @@ paths: - $ref: '#/components/x-bte-kgs-operations/nsba-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-moft' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-moft-rev' + - $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-patf' - $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-inch' - $ref: '#/components/x-bte-kgs-operations/nsba-INTERACTS_WITH-nsba-rev' + - $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/horm-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-phsu' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/elii-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-nsba' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-gngm' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-CAUSES-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd-COEXISTS_WITH-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AUGMENTS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-gngm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-CAUSES-dsyn-rev' @@ -1898,8 +1986,11 @@ paths: - $ref: '#/components/x-bte-kgs-operations/inch-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/comd-COEXISTS_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-elii' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-orch' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-ASSOCIATED_WITH-mobd_umls' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-tisu' + - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/celc_umls-LOCATION_OF-gngm_ncbigene' @@ -1911,12 +2002,15 @@ paths: - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-neop-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-inpo' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-ortf' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/diap-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-comd' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-nsba' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-orch' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CAUSES-mobd' - $ref: '#/components/x-bte-kgs-operations/antb-PREVENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-patf' @@ -1929,20 +2023,25 @@ paths: - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-cgab' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-neop' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-imft' - $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/phsf-AFFECTS-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-INTERACTS_WITH-hops' + - $ref: '#/components/x-bte-kgs-operations/horm-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-CAUSES-sosy' - $ref: '#/components/x-bte-kgs-operations/sosy-CAUSES-sosy-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-horm' - $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-orch' - $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-anab' - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-anab-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-bpoc-rev' @@ -1956,12 +2055,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-dsyn_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-dsyn_umls-rev' - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-bacs' + - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-PROCESS_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-celc' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-celc-rev' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-comd' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-biof' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-biof-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-phsf' - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-horm-rev' @@ -1980,6 +2081,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-celc_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-celc_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-tisu' + - $ref: '#/components/x-bte-kgs-operations/hops-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-comd' - $ref: '#/components/x-bte-kgs-operations/phsu-INHIBITS-aapp-rev' @@ -1995,6 +2097,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/dora-TREATS-patf' - $ref: '#/components/x-bte-kgs-operations/dora-TREATS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-aapp' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-phsu' @@ -2003,10 +2106,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bact_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bact_umls-rev' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-horm' + - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/nsba_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-bacs' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-ASSOCIATED_WITH-sosy-rev' @@ -2020,16 +2125,17 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-bacs_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-dsyn' - - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-phsf' - $ref: '#/components/x-bte-kgs-operations/bacs_umls-COEXISTS_WITH-aapp_ncbigene' + - $ref: '#/components/x-bte-kgs-operations/lipd-INTERACTS_WITH-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/comd-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/comd-PRODUCES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/neop-COEXISTS_WITH-celf' - $ref: '#/components/x-bte-kgs-operations/neop-COEXISTS_WITH-celf-rev' + - $ref: '#/components/x-bte-kgs-operations/orch_umls-COEXISTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/orch_umls-COEXISTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-patf-rev' @@ -2040,6 +2146,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/dsyn-DISRUPTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-neop' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-neop-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-comd' - $ref: '#/components/x-bte-kgs-operations/carb-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-orch' @@ -2048,11 +2155,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/inch-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-elii' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-celc' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INTERACTS_WITH-eico' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/elii-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-horm' + - $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_umls-INTERACTS_WITH-aapp_ncbigene-rev' @@ -2062,7 +2171,6 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orch-PREVENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-aapp' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-aapp-rev' - - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/nnon-AUGMENTS-bpoc-rev' @@ -2095,15 +2203,20 @@ paths: - $ref: '#/components/x-bte-kgs-operations/medd-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-imft' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-carb' + - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-carb-rev' - $ref: '#/components/x-bte-kgs-operations/opco-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/anab-PART_OF-neop' - $ref: '#/components/x-bte-kgs-operations/anab-PART_OF-neop-rev' + - $ref: '#/components/x-bte-kgs-operations/nnon-INTERACTS_WITH-nnon' + - $ref: '#/components/x-bte-kgs-operations/nnon-INTERACTS_WITH-nnon-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-bacs' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-lipd' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-tisu' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-horm' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-imft' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-imft-rev' @@ -2113,9 +2226,15 @@ paths: - $ref: '#/components/x-bte-kgs-operations/antb_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/topp-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/phsu-INHIBITS-horm' + - $ref: '#/components/x-bte-kgs-operations/phsu-INHIBITS-horm-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-nsba' + - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-nsba-rev' - $ref: '#/components/x-bte-kgs-operations/dora-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/phsf-AFFECTS-orga-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-patf' - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/nsba-STIMULATES-nsba-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-cell' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-inch' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-biof-rev' @@ -2139,25 +2258,30 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-acab' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-patf' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/bpoc-PART_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/bpoc-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-bacs' + - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/orch-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-virs' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-virs-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/acab-COEXISTS_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-PRODUCES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-PRODUCES-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-carb' + - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-mobd' - $ref: '#/components/x-bte-kgs-operations/biof-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/biof-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/inbe-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/cgab-PART_OF-aggp' - $ref: '#/components/x-bte-kgs-operations/cgab-PART_OF-aggp-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-nsba' - $ref: '#/components/x-bte-kgs-operations/diap-DIAGNOSES-comd' - $ref: '#/components/x-bte-kgs-operations/lipd-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/inch-AUGMENTS-cell-rev' @@ -2168,11 +2292,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/patf-ASSOCIATED_WITH-aapp' - $ref: '#/components/x-bte-kgs-operations/patf-ASSOCIATED_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/hops-DISRUPTS-moft-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-biof' - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/acab-AFFECTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-CAUSES-orgf' - $ref: '#/components/x-bte-kgs-operations/ortf-CAUSES-orgf-rev' + - $ref: '#/components/x-bte-kgs-operations/carb-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-celc' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-celc-rev' @@ -2183,6 +2309,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-hops' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-CAUSES-comd_umls' + - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-eico' - $ref: '#/components/x-bte-kgs-operations/antb-TREATS-sosy-rev' @@ -2205,6 +2332,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-sosy' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-sosy-rev' + - $ref: '#/components/x-bte-kgs-operations/carb-COEXISTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/nsba-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-inch' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-nusq-rev' @@ -2242,8 +2370,10 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-bpoc-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-inch' - $ref: '#/components/x-bte-kgs-operations/nsba-CAUSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-orch' + - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-eico' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-biof_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-biof_umls-rev' @@ -2256,11 +2386,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bpoc-PART_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/bact-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-phsu' + - $ref: '#/components/x-bte-kgs-operations/antb-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-nnon' - $ref: '#/components/x-bte-kgs-operations/carb-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-tisu' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-tisu-rev' - $ref: '#/components/x-bte-kgs-operations/elii-INHIBITS-elii' + - $ref: '#/components/x-bte-kgs-operations/elii-INHIBITS-elii-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-nnon' - $ref: '#/components/x-bte-kgs-operations/phsu-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/inch-INHIBITS-bacs-rev' @@ -2275,6 +2407,8 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-biof' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-biof-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-orch' + - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/dora-PREVENTS-sosy' - $ref: '#/components/x-bte-kgs-operations/dora-PREVENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/imft-PREVENTS-virs' @@ -2290,10 +2424,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/blor-LOCATION_OF-biof-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/antb_umls-STIMULATES-gngm_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-mobd' + - $ref: '#/components/x-bte-kgs-operations/nsba-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-inch' + - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/neop-MANIFESTATION_OF-neop' - $ref: '#/components/x-bte-kgs-operations/neop-MANIFESTATION_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-inch_umls' + - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-COEXISTS_WITH-inch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/horm_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-bacs' @@ -2306,6 +2444,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-patf' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-phsu' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-nusq' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-comd' @@ -2327,16 +2466,19 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/eico-INTERACTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/eico_umls-STIMULATES-gngm_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-elii' - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-inch' - $ref: '#/components/x-bte-kgs-operations/nsba-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-PRECEDES-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-comd' + - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-dsyn' - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/hops-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/topp-PREVENTS-virs' - $ref: '#/components/x-bte-kgs-operations/topp-PREVENTS-virs-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-irda' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-lipd' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-dsyn' @@ -2345,6 +2487,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/emst-LOCATION_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-elii' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-COEXISTS_WITH-aapp_ncbigene' + - $ref: '#/components/x-bte-kgs-operations/antb-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/imft_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/imft_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/hops-ASSOCIATED_WITH-sosy-rev' @@ -2357,10 +2500,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-bodm' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-elii' + - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-inpo' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-cell' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-ASSOCIATED_WITH-inpo_umls' - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/inch-INHIBITS-inch-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-PROCESS_OF-emod-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-tisu_umls' - $ref: '#/components/x-bte-kgs-operations/dsyn-PRECEDES-comd' @@ -2373,6 +2518,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-eico' - $ref: '#/components/x-bte-kgs-operations/hops_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-PART_OF-bact-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-hops' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-lipd' @@ -2416,11 +2562,16 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-celc_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-comd' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-comd' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-comd-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/anab-COEXISTS_WITH-anab' - $ref: '#/components/x-bte-kgs-operations/anab-COEXISTS_WITH-anab-rev' + - $ref: '#/components/x-bte-kgs-operations/eico-INTERACTS_WITH-eico' + - $ref: '#/components/x-bte-kgs-operations/eico-INTERACTS_WITH-eico-rev' + - $ref: '#/components/x-bte-kgs-operations/horm-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AUGMENTS-celc_umls-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/tisu_umls-PRODUCES-aapp_ncbigene-rev' @@ -2434,6 +2585,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-anst' - $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-anst-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-dsyn' + - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-patf' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-plnt' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-plnt-rev' @@ -2454,6 +2606,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-nsba' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-anab' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-anab-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-phsu' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-bodm' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/bact-CAUSES-orgf' @@ -2463,6 +2616,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/lipd-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/eico-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/hops-AFFECTS-cell-rev' + - $ref: '#/components/x-bte-kgs-operations/inch-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/inch-ASSOCIATED_WITH-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-phsf_umls' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-phsf' @@ -2472,10 +2626,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PRODUCES-horm' + - $ref: '#/components/x-bte-kgs-operations/neop-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-cell_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AFFECTS-cell-rev' - - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-inpo' + - $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-inch' + - $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-inch-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-COEXISTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-inpo' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-carb' @@ -2508,11 +2664,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/lipd-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-bacs' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd_umls-STIMULATES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/antb-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-PRODUCES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-PRODUCES-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-phsu_umls' + - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-phsu_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-bodm' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-celc-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-ASSOCIATED_WITH-sosy' @@ -2536,10 +2695,10 @@ paths: - $ref: '#/components/x-bte-kgs-operations/topp-ADMINISTERED_TO-aggp' - $ref: '#/components/x-bte-kgs-operations/topp-ADMINISTERED_TO-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-orch' - - $ref: '#/components/x-bte-kgs-operations/sbst-AFFECTS-moft' - $ref: '#/components/x-bte-kgs-operations/sbst-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-cell' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-cell-rev' + - $ref: '#/components/x-bte-kgs-operations/nsba-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/cgab-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/diap-DIAGNOSES-emod' - $ref: '#/components/x-bte-kgs-operations/diap-DIAGNOSES-emod-rev' @@ -2555,6 +2714,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/orch-PREVENTS-acab' - $ref: '#/components/x-bte-kgs-operations/phsu-DISRUPTS-cell-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-elii' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-lipd_umls' - $ref: '#/components/x-bte-kgs-operations/mobd-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-fndg-rev' @@ -2562,12 +2722,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INTERACTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INTERACTS_WITH-aapp_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/nsba_umls-COEXISTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/nsba_umls-COEXISTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-bpoc' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-neop_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-neop_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/inch-STIMULATES-inch-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-COEXISTS_WITH-emod' - $ref: '#/components/x-bte-kgs-operations/inpo-COEXISTS_WITH-emod-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-tisu_umls' @@ -2575,8 +2737,10 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/strd-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/opco-CAUSES-inpo-rev' + - $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-nsba-rev' - $ref: '#/components/x-bte-kgs-operations/inch-CAUSES-phsf-rev' - $ref: '#/components/x-bte-kgs-operations/cell_umls-INTERACTS_WITH-aapp_ncbigene' + - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-STIMULATES-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-inpo_umls' @@ -2600,8 +2764,10 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-sosy' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-orch' + - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-nsba' + - $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-patf' - $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-orch' @@ -2612,9 +2778,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/eico-AFFECTS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/mobd-COEXISTS_WITH-emod' - $ref: '#/components/x-bte-kgs-operations/mobd-COEXISTS_WITH-emod-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-celc' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-MANIFESTATION_OF-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-celf' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-inch' + - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-comd' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-CAUSES-phsf_umls' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-nsba' @@ -2632,12 +2801,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-nsba' - $ref: '#/components/x-bte-kgs-operations/opco-INHIBITS-gngm-rev' + - $ref: '#/components/x-bte-kgs-operations/nsba-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/nsba-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/dora-PREVENTS-patf' - $ref: '#/components/x-bte-kgs-operations/dora-PREVENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AUGMENTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/nsba_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-antb_umls' + - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-moft_umls-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AFFECTS-celc-rev' @@ -2651,11 +2822,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-ASSOCIATED_WITH-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/inch-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-fndg' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/eico-AUGMENTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/lipd_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-mobd' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-lipd' - $ref: '#/components/x-bte-kgs-operations/nsba-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-aapp-rev' @@ -2671,20 +2844,26 @@ paths: - $ref: '#/components/x-bte-kgs-operations/inch-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-neop' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-neop-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-nsba' - $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-nsba-rev' - $ref: '#/components/x-bte-kgs-operations/antb_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-celf' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-celf-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-bacs' + - $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-PART_OF-aggp' - $ref: '#/components/x-bte-kgs-operations/bdsu-PART_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CONVERTS_TO-orch' + - $ref: '#/components/x-bte-kgs-operations/aapp-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/cgab-COEXISTS_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PREDISPOSES-sosy' - $ref: '#/components/x-bte-kgs-operations/topp-PREDISPOSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/antb-INHIBITS-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-neop' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-horm' + - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/comd-PROCESS_OF-emod-rev' - $ref: '#/components/x-bte-kgs-operations/carb-TREATS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-horm' @@ -2694,7 +2873,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/horm-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/hops-AUGMENTS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-mobd' + - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-strd' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AUGMENTS-neop_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-PART_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/nusq-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-PROCESS_OF-emod-rev' @@ -2708,6 +2889,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-PREVENTS-acab' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-nusq' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-nusq-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-carb' - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-moft' - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-moft-rev' @@ -2726,6 +2908,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bact-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/lipd_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-orch' + - $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-orch-rev' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/carb_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-ortf' @@ -2743,11 +2926,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-biof' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CAUSES-cgab_umls' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-comd' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/hops-COEXISTS_WITH-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-neop' - $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-horm_umls' + - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-horm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/elii_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-inpo' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-carb' @@ -2759,11 +2944,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-orch_umls' + - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-orch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PREDISPOSES-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-OCCURS_IN-aggp' - $ref: '#/components/x-bte-kgs-operations/orgf-OCCURS_IN-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-lipd' + - $ref: '#/components/x-bte-kgs-operations/strd-INTERACTS_WITH-horm-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs_umls-INHIBITS-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/lbtr-COEXISTS_WITH-lbtr' - $ref: '#/components/x-bte-kgs-operations/lbtr-COEXISTS_WITH-lbtr-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-antb' @@ -2791,6 +2979,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-patf_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-DISRUPTS-celf-rev' + - $ref: '#/components/x-bte-kgs-operations/horm-DISRUPTS-ortf' - $ref: '#/components/x-bte-kgs-operations/antb-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-patf_umls' - $ref: '#/components/x-bte-kgs-operations/phsu-INTERACTS_WITH-gngm-rev' @@ -2801,16 +2990,19 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-inch_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PREDISPOSES-inpo_umls' - $ref: '#/components/x-bte-kgs-operations/aapp-DISRUPTS-inpo' + - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-lipd' - $ref: '#/components/x-bte-kgs-operations/antb-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/mobd-PRECEDES-mobd-rev' - $ref: '#/components/x-bte-kgs-operations/biof-AFFECTS-neop' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-moft' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-horm_umls' + - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-horm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AUGMENTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/food-CAUSES-inpo' - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-phsu' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-mobd-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-cell' - $ref: '#/components/x-bte-kgs-operations/aapp-AUGMENTS-cell-rev' @@ -2834,21 +3026,25 @@ paths: - $ref: '#/components/x-bte-kgs-operations/lipd-AFFECTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-STIMULATES-antb' + - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-acab' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-emst_umls' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-comd' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-bacs' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/strd-COEXISTS_WITH-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-neop' - $ref: '#/components/x-bte-kgs-operations/nnon-DISRUPTS-neop-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PART_OF-anst' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-strd' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-horm' - $ref: '#/components/x-bte-kgs-operations/horm-CONVERTS_TO-horm' - $ref: '#/components/x-bte-kgs-operations/horm-CONVERTS_TO-horm-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-inch' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-bacs' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-orch_umls' + - $ref: '#/components/x-bte-kgs-operations/emst-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/hops_umls-INTERACTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/orch-INTERACTS_WITH-rcpt-rev' @@ -2858,7 +3054,6 @@ paths: - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/carb-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-tisu' - - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-comd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-lipd_umls' - $ref: '#/components/x-bte-kgs-operations/emst-PART_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-ASSOCIATED_WITH-bact' @@ -2873,6 +3068,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PART_OF-nusq_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-TREATS-patf' - $ref: '#/components/x-bte-kgs-operations/aapp-TREATS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/nsba-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-imft_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-imft_umls-rev' - $ref: '#/components/x-bte-kgs-operations/horm-PREDISPOSES-patf-rev' @@ -2892,6 +3088,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-celc' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/biof-AFFECTS-ortf' + - $ref: '#/components/x-bte-kgs-operations/lipd-STIMULATES-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/eico-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-fngs-rev' @@ -2903,9 +3100,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-lipd' + - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-sosy-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-inch' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-hops' - $ref: '#/components/x-bte-kgs-operations/moft_umls-AFFECTS-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/orch-AUGMENTS-mobd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-irda_umls' @@ -2913,10 +3113,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/acab-PART_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-PREDISPOSES-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-carb' - $ref: '#/components/x-bte-kgs-operations/hops-AFFECTS-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-phsf' - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-gngm' - $ref: '#/components/x-bte-kgs-operations/plnt-LOCATION_OF-gngm-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/inch-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-imft' - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-imft-rev' @@ -2933,6 +3135,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-eico' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-phsu' - $ref: '#/components/x-bte-kgs-operations/opco-TREATS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-fndg-rev' @@ -2955,12 +3158,15 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AUGMENTS-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-acab' - $ref: '#/components/x-bte-kgs-operations/phsu-AFFECTS-celc-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/bacs-INTERACTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-tisu' - $ref: '#/components/x-bte-kgs-operations/hops-INHIBITS-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AFFECTS-celc-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-orgf' - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-eico' + - $ref: '#/components/x-bte-kgs-operations/eico-STIMULATES-eico-rev' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-biof' - $ref: '#/components/x-bte-kgs-operations/food-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-celc-rev' @@ -2973,6 +3179,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-phsu' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-comd' + - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/lbtr-COEXISTS_WITH-sosy' @@ -2988,8 +3195,10 @@ paths: - $ref: '#/components/x-bte-kgs-operations/strd-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AUGMENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-celc-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-inpo' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-DISRUPTS-patf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CAUSES-sosy' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-strd' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-orgf' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AUGMENTS-patf_umls-rev' @@ -2997,13 +3206,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/emst-LOCATION_OF-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-INHIBITS-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INHIBITS-orch_umls' + - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INHIBITS-orch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-gngm' - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_umls-COEXISTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/horm-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-emod-rev' - - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-mobd' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-fngs' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/anab-OCCURS_IN-aggp' @@ -3022,13 +3231,16 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bact_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-same_as-aapp' - $ref: '#/components/x-bte-kgs-operations/aapp-same_as-aapp-rev' + - $ref: '#/components/x-bte-kgs-operations/elii-ASSOCIATED_WITH-comd' - $ref: '#/components/x-bte-kgs-operations/strd-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-elii' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-eico' - $ref: '#/components/x-bte-kgs-operations/neop-COMPLICATES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/virs-CAUSES-ortf' - $ref: '#/components/x-bte-kgs-operations/virs-CAUSES-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-CAUSES-dsyn' - $ref: '#/components/x-bte-kgs-operations/nusq-CAUSES-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-celf' - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-celf-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-ASSOCIATED_WITH-neop' - $ref: '#/components/x-bte-kgs-operations/rcpt-ASSOCIATED_WITH-neop-rev' @@ -3041,11 +3253,11 @@ paths: - $ref: '#/components/x-bte-kgs-operations/virs-CAUSES-comd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-acab_umls' - $ref: '#/components/x-bte-kgs-operations/ortf-AFFECTS-biof-rev' - - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/rcpt-INHIBITS-gngm' - $ref: '#/components/x-bte-kgs-operations/rcpt-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/dora-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/neop-AFFECTS-biof-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-acab' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-nsba' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-aapp' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-aapp-rev' @@ -3063,9 +3275,11 @@ paths: - $ref: '#/components/x-bte-kgs-operations/dsyn-MANIFESTATION_OF-orgf' - $ref: '#/components/x-bte-kgs-operations/dsyn-MANIFESTATION_OF-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-phsu' + - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-phsu-rev' - $ref: '#/components/x-bte-kgs-operations/eico-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-orgf' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/antb-INHIBITS-antb-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-antb' - $ref: '#/components/x-bte-kgs-operations/phsu-DISRUPTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-biof-rev' @@ -3091,12 +3305,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/fngs-INTERACTS_WITH-bact-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-orch' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-eico' + - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-elii' - $ref: '#/components/x-bte-kgs-operations/elii_umls-INTERACTS_WITH-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/antb-DISRUPTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-DISRUPTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/inpo-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-TREATS-patf_umls' - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-TREATS-patf_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/carb-CONVERTS_TO-carb' - $ref: '#/components/x-bte-kgs-operations/carb-CONVERTS_TO-carb-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-patf-rev' @@ -3125,6 +3341,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-COEXISTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-COEXISTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-orch' + - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-emst' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-aggp' @@ -3147,7 +3364,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/sosy-DIAGNOSES-anab-rev' - $ref: '#/components/x-bte-kgs-operations/food-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/food-ASSOCIATED_WITH-inpo-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-bpoc' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-bpoc-rev' + - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-MANIFESTATION_OF-patf' - $ref: '#/components/x-bte-kgs-operations/sosy-MANIFESTATION_OF-patf-rev' @@ -3164,26 +3383,33 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-neop' - $ref: '#/components/x-bte-kgs-operations/gngm-ADMINISTERED_TO-cell' - $ref: '#/components/x-bte-kgs-operations/gngm-ADMINISTERED_TO-cell-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-emst' - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-antb' + - $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-neop' - $ref: '#/components/x-bte-kgs-operations/patf-MANIFESTATION_OF-celf' - $ref: '#/components/x-bte-kgs-operations/neop-PART_OF-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-rcpt_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-rcpt_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CONVERTS_TO-elii' + - $ref: '#/components/x-bte-kgs-operations/carb-INHIBITS-carb-rev' - $ref: '#/components/x-bte-kgs-operations/comd-OCCURS_IN-neop' - $ref: '#/components/x-bte-kgs-operations/comd-OCCURS_IN-neop-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-neop_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-neop_umls-rev' - $ref: '#/components/x-bte-kgs-operations/biof-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/biof-PRODUCES-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-horm' - $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-orch-rev' - $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-cell-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/hops-PREDISPOSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-PART_OF-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-PART_OF-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/comd-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-orch' + - $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-orch-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-nsba' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/inch_umls-COEXISTS_WITH-gngm_ncbigene-rev' @@ -3204,6 +3430,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-hops' - $ref: '#/components/x-bte-kgs-operations/cgab-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/cgab-LOCATION_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/fngs_umls-LOCATION_OF-gngm_ncbigene' @@ -3229,7 +3456,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/carb_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-mobd_umls' - $ref: '#/components/x-bte-kgs-operations/phsf-PRODUCES-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-acab' - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-emst' - $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-moft' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-moft-rev' @@ -3239,6 +3468,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-carb' + - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-carb-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-eico' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-fngs' - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-fngs-rev' @@ -3252,6 +3482,8 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/eico-INHIBITS-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INHIBITS-orch' + - $ref: '#/components/x-bte-kgs-operations/gngm-INHIBITS-orch-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-inpo' - $ref: '#/components/x-bte-kgs-operations/anst-PART_OF-neop' - $ref: '#/components/x-bte-kgs-operations/anst-PART_OF-neop-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-CONVERTS_TO-bacs-rev' @@ -3278,6 +3510,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-patf' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/tisu-PRODUCES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-PART_OF-emst' - $ref: '#/components/x-bte-kgs-operations/strd-PREDISPOSES-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-nusq_umls' @@ -3297,6 +3530,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orgf-AFFECTS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-bacs' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-neop_umls-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-fngs' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-fngs-rev' @@ -3311,6 +3545,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/nsba-STIMULATES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PRODUCES-tisu' - $ref: '#/components/x-bte-kgs-operations/neop-PRODUCES-tisu-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-mobd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREDISPOSES-mobd_umls' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-bdsu' - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-bdsu-rev' @@ -3354,6 +3589,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-fngs' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-AFFECTS-celf-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-phsf' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-bdsu' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-bdsu-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-ASSOCIATED_WITH-inpo' @@ -3363,6 +3599,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/patf-PRECEDES-comd' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-strd' - $ref: '#/components/x-bte-kgs-operations/antb-AFFECTS-biof-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-DISRUPTS-sosy' - $ref: '#/components/x-bte-kgs-operations/hops-DISRUPTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/celf_umls-PRODUCES-bacs_ncbigene' - $ref: '#/components/x-bte-kgs-operations/celf_umls-PRODUCES-bacs_ncbigene-rev' @@ -3376,6 +3613,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/hops-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/acab-COEXISTS_WITH-anab-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PRODUCES-aapp_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/strd-COEXISTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/opco-DISRUPTS-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-DISRUPTS-comd_umls' - $ref: '#/components/x-bte-kgs-operations/inch-PREDISPOSES-inpo-rev' @@ -3388,6 +3626,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-tisu' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-lipd' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-horm' + - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bacs_ncbigene-PREVENTS-dsyn_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AUGMENTS-patf-rev' @@ -3404,6 +3643,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-orch' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-ADMINISTERED_TO-cell_umls-rev' - $ref: '#/components/x-bte-kgs-operations/strd-DISRUPTS-orgf-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-horm' - $ref: '#/components/x-bte-kgs-operations/strd_umls-STIMULATES-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-inpo' @@ -3415,6 +3655,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/anab-AFFECTS-ortf' - $ref: '#/components/x-bte-kgs-operations/gngm-INTERACTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/eico-CONVERTS_TO-eico' + - $ref: '#/components/x-bte-kgs-operations/eico-CONVERTS_TO-eico-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PRODUCES-strd' - $ref: '#/components/x-bte-kgs-operations/imft-PREDISPOSES-patf' - $ref: '#/components/x-bte-kgs-operations/imft-PREDISPOSES-patf-rev' @@ -3430,6 +3671,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-COEXISTS_WITH-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PRODUCES-bacs_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-tisu_umls' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-cell' @@ -3446,6 +3688,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/neop-AFFECTS-bact-rev' - $ref: '#/components/x-bte-kgs-operations/inch-AUGMENTS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-nusq' - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-DISRUPTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/hops-DISRUPTS-neop-rev' @@ -3494,11 +3737,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/inch-DISRUPTS-cell-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/nnon-TREATS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/elii-PREDISPOSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/neop-MANIFESTATION_OF-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/opco-AUGMENTS-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/topp-USES-bacs' + - $ref: '#/components/x-bte-kgs-operations/topp-USES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/sosy-COEXISTS_WITH-comd' - $ref: '#/components/x-bte-kgs-operations/orch-ADMINISTERED_TO-aggp' - $ref: '#/components/x-bte-kgs-operations/orch-ADMINISTERED_TO-aggp-rev' @@ -3510,13 +3755,17 @@ paths: - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/topp-USES-imft' - $ref: '#/components/x-bte-kgs-operations/topp-USES-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-antb' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-horm' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-antb' - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/food-PREDISPOSES-mobd' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-patf' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-acab' - $ref: '#/components/x-bte-kgs-operations/elii-AUGMENTS-acab-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-COEXISTS_WITH-strd' - $ref: '#/components/x-bte-kgs-operations/imft-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/nsba-AUGMENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/patf-PRECEDES-neop' @@ -3563,6 +3812,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-mobd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-phsu_umls' - $ref: '#/components/x-bte-kgs-operations/topp-USES-inch' + - $ref: '#/components/x-bte-kgs-operations/antb-STIMULATES-antb-rev' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-bact' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-carb' @@ -3581,6 +3831,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/carb-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-horm' - $ref: '#/components/x-bte-kgs-operations/antb-INTERACTS_WITH-bodm-rev' + - $ref: '#/components/x-bte-kgs-operations/carb-STIMULATES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-carb_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-DISRUPTS-tisu_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-lipd' @@ -3609,9 +3860,11 @@ paths: - $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-imft' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-AFFECTS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/comd-MANIFESTATION_OF-comd' - $ref: '#/components/x-bte-kgs-operations/comd-MANIFESTATION_OF-comd-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-imft' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/topp-USES-topp' - $ref: '#/components/x-bte-kgs-operations/topp-USES-topp-rev' @@ -3631,6 +3884,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orch-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-imft' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/elii-AFFECTS-sosy-rev' @@ -3638,6 +3892,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-sosy' - $ref: '#/components/x-bte-kgs-operations/orch-PREDISPOSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/patf-COEXISTS_WITH-emod-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-cell' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-cell-rev' - $ref: '#/components/x-bte-kgs-operations/opco-COEXISTS_WITH-inch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-bdsu' @@ -3662,6 +3917,8 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-neop' - $ref: '#/components/x-bte-kgs-operations/opco-INTERACTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/hops-CONVERTS_TO-hops' + - $ref: '#/components/x-bte-kgs-operations/hops-CONVERTS_TO-hops-rev' + - $ref: '#/components/x-bte-kgs-operations/eico-COEXISTS_WITH-lipd-rev' - $ref: '#/components/x-bte-kgs-operations/lbtr-PREDISPOSES-neop' - $ref: '#/components/x-bte-kgs-operations/medd-same_as-medd' - $ref: '#/components/x-bte-kgs-operations/medd-same_as-medd-rev' @@ -3686,6 +3943,8 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-lipd' - $ref: '#/components/x-bte-kgs-operations/lipd-INTERACTS_WITH-irda-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-antb' + - $ref: '#/components/x-bte-kgs-operations/inch-CONVERTS_TO-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/ortf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/cgab-MANIFESTATION_OF-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/celc-LOCATION_OF-horm' - $ref: '#/components/x-bte-kgs-operations/horm-DISRUPTS-bpoc-rev' @@ -3706,6 +3965,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-lipd' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-carb' - $ref: '#/components/x-bte-kgs-operations/strd_umls-INHIBITS-gngm_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-eico' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-enzy' - $ref: '#/components/x-bte-kgs-operations/patf-PRODUCES-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-nnon' @@ -3721,8 +3981,10 @@ paths: - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-elii' - $ref: '#/components/x-bte-kgs-operations/nnon-COEXISTS_WITH-phsu-rev' - $ref: '#/components/x-bte-kgs-operations/opco-DISRUPTS-neop-rev' + - $ref: '#/components/x-bte-kgs-operations/elii-CONVERTS_TO-inch-rev' - $ref: '#/components/x-bte-kgs-operations/carb-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/carb-PREDISPOSES-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/eico-INHIBITS-eico-rev' - $ref: '#/components/x-bte-kgs-operations/carb-TREATS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-AFFECTS-anab' - $ref: '#/components/x-bte-kgs-operations/lipd-INTERACTS_WITH-imft-rev' @@ -3742,6 +4004,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-rcpt' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AFFECTS-fndg-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-imft-rev' - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-emod' - $ref: '#/components/x-bte-kgs-operations/acab-LOCATION_OF-emod-rev' @@ -3800,6 +4063,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-imft_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-rcpt-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-tisu' - $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-virs-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-ASSOCIATED_WITH-dsyn' @@ -3808,18 +4072,22 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-patf' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/irda-COEXISTS_WITH-orch' + - $ref: '#/components/x-bte-kgs-operations/orch-DISRUPTS-tisu' - $ref: '#/components/x-bte-kgs-operations/carb-COEXISTS_WITH-gngm-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-fndg' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-COEXISTS_WITH-opco' + - $ref: '#/components/x-bte-kgs-operations/opco-INTERACTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/eico-INHIBITS-aapp-rev' - - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-acab' - $ref: '#/components/x-bte-kgs-operations/nnon-INHIBITS-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-acab' + - $ref: '#/components/x-bte-kgs-operations/eico-COEXISTS_WITH-eico' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-nusq' - $ref: '#/components/x-bte-kgs-operations/orch-STIMULATES-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/anab-PART_OF-bact' - $ref: '#/components/x-bte-kgs-operations/anab-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/cell-LOCATION_OF-antb' + - $ref: '#/components/x-bte-kgs-operations/phsf-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/bact-LOCATION_OF-opco' - $ref: '#/components/x-bte-kgs-operations/antb-PREDISPOSES-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-TREATS-mobd' @@ -3829,6 +4097,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp-INHIBITS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/eico-CAUSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-DISRUPTS-tisu' + - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-anst' - $ref: '#/components/x-bte-kgs-operations/lipd-PART_OF-anst-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/clnd-CAUSES-dsyn' @@ -3838,6 +4107,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-eico' + - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-eico-rev' - $ref: '#/components/x-bte-kgs-operations/bodm-INTERACTS_WITH-phsu' - $ref: '#/components/x-bte-kgs-operations/celf-AFFECTS-virs-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-PREDISPOSES-sosy-rev' @@ -3886,7 +4156,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/virs-CAUSES-mobd' - $ref: '#/components/x-bte-kgs-operations/nusq_umls-INTERACTS_WITH-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/nusq_umls-INTERACTS_WITH-aapp_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/phsu-CONVERTS_TO-gngm' - $ref: '#/components/x-bte-kgs-operations/phsu-CONVERTS_TO-gngm-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-patf' - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-same_as-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-same_as-aapp_ncbigene-rev' @@ -3901,6 +4173,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/medd-TREATS-comd' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-acab_umls' + - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-AFFECTS-orgf' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-STIMULATES-eico_umls' @@ -3915,6 +4188,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/strd-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/elii-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-orch' + - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-orch-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CONVERTS_TO-gngm' - $ref: '#/components/x-bte-kgs-operations/gngm-CONVERTS_TO-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-CONVERTS_TO-phsu-rev' @@ -3933,12 +4207,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-AFFECTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-STIMULATES-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-STIMULATES-gngm_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-anab' - $ref: '#/components/x-bte-kgs-operations/bacs-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/bacs-PRODUCES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bodm_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INTERACTS_WITH-bodm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/emod-COEXISTS_WITH-patf' - $ref: '#/components/x-bte-kgs-operations/emod-COEXISTS_WITH-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-fndg' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PREVENTS-comd' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-enzy' @@ -3960,6 +4236,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-acab' - $ref: '#/components/x-bte-kgs-operations/clnd-PREVENTS-dsyn' - $ref: '#/components/x-bte-kgs-operations/clnd-PREVENTS-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/strd-INHIBITS-horm-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-STIMULATES-gngm_umls-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-irda' - $ref: '#/components/x-bte-kgs-operations/bdsu-LOCATION_OF-irda-rev' @@ -3985,6 +4262,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-cell' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-cell-rev' - $ref: '#/components/x-bte-kgs-operations/eico-AUGMENTS-fndg-rev' + - $ref: '#/components/x-bte-kgs-operations/carb-CONVERTS_TO-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/eico-AFFECTS-dsyn-rev' @@ -4013,16 +4291,21 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-anst' - $ref: '#/components/x-bte-kgs-operations/carb-DISRUPTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/inpo-COMPLICATES-dsyn-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-DISRUPTS-mobd' - $ref: '#/components/x-bte-kgs-operations/strd-AFFECTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/hops-PART_OF-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/antb-AUGMENTS-inpo-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-nusq' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-nusq-rev' + - $ref: '#/components/x-bte-kgs-operations/nnon-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-sosy_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-DISRUPTS-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-fngs' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-fngs-rev' + - $ref: '#/components/x-bte-kgs-operations/opco-COEXISTS_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-imft' - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-inch' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-eico_umls' - $ref: '#/components/x-bte-kgs-operations/carb-same_as-carb' - $ref: '#/components/x-bte-kgs-operations/carb-same_as-carb-rev' @@ -4070,6 +4353,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-antb_umls' - $ref: '#/components/x-bte-kgs-operations/cell-PRODUCES-phsu' - $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-carb' + - $ref: '#/components/x-bte-kgs-operations/strd-STIMULATES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/imft-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/carb-AUGMENTS-patf-rev' @@ -4097,6 +4381,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_umls-same_as-aapp_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-same_as-aapp_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-nnon' + - $ref: '#/components/x-bte-kgs-operations/bacs-PREDISPOSES-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-PREDISPOSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-virs' - $ref: '#/components/x-bte-kgs-operations/anab-LOCATION_OF-virs-rev' @@ -4123,8 +4408,11 @@ paths: - $ref: '#/components/x-bte-kgs-operations/antb-same_as-antb' - $ref: '#/components/x-bte-kgs-operations/antb-same_as-antb-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-horm' + - $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-strd' - $ref: '#/components/x-bte-kgs-operations/bacs_ncbigene-INTERACTS_WITH-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-STIMULATES-horm' + - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-horm' + - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-acab' - $ref: '#/components/x-bte-kgs-operations/comd-PRECEDES-comd-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-INHIBITS-inch' - $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-imft-rev' @@ -4133,6 +4421,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/horm-INTERACTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-INTERACTS_WITH-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-phsu' + - $ref: '#/components/x-bte-kgs-operations/opco-INTERACTS_WITH-opco' - $ref: '#/components/x-bte-kgs-operations/gngm-AUGMENTS-mobd' - $ref: '#/components/x-bte-kgs-operations/nnon_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/antb-CAUSES-celf-rev' @@ -4142,12 +4431,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/phsu-PART_OF-bpoc-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/enzy_ncbigene-DISRUPTS-ortf_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/enzy-INTERACTS_WITH-nnon-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AFFECTS-biof_umls-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-PART_OF-bact' - $ref: '#/components/x-bte-kgs-operations/enzy-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/nusq_umls-INTERACTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm-INHIBITS-horm' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-hops' + - $ref: '#/components/x-bte-kgs-operations/orch-CONVERTS_TO-hops' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-CONVERTS_TO-lipd' - $ref: '#/components/x-bte-kgs-operations/nnon-same_as-nnon' @@ -4168,6 +4459,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_umls-INTERACTS_WITH-enzy_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREDISPOSES-sosy_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREDISPOSES-sosy_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-phsu' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/irda-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-MANIFESTATION_OF-phsf' @@ -4183,6 +4475,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/nnon-PREVENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/neop-COMPLICATES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-LOCATION_OF-phsu_ncbigene' + - $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-enzy' - $ref: '#/components/x-bte-kgs-operations/elii-STIMULATES-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/eico-PREDISPOSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AFFECTS-celc' @@ -4250,6 +4543,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/dsyn-OCCURS_IN-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-acab_umls' - $ref: '#/components/x-bte-kgs-operations/phsu-ADMINISTERED_TO-cell-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-moft' - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-moft-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-CAUSES-celf' @@ -4261,6 +4555,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-nsba' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-gngm_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-celc' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/anab-COMPLICATES-anab' @@ -4295,6 +4590,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/bacs-CONVERTS_TO-strd' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-TREATS-acab_umls' - $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-bacs' + - $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-COEXISTS_WITH-nnon' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-emst_umls' - $ref: '#/components/x-bte-kgs-operations/comd-PRODUCES-enzy' @@ -4361,11 +4657,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-INHIBITS-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/rcpt_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-INHIBITS-gngm_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-comd' - $ref: '#/components/x-bte-kgs-operations/elii-DISRUPTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/irda-ADMINISTERED_TO-cell' - $ref: '#/components/x-bte-kgs-operations/irda-ADMINISTERED_TO-cell-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-PRODUCES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/irda-COEXISTS_WITH-hops' + - $ref: '#/components/x-bte-kgs-operations/irda-COEXISTS_WITH-hops-rev' - $ref: '#/components/x-bte-kgs-operations/patf-COMPLICATES-neop' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-bact_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-orch' @@ -4396,21 +4694,27 @@ paths: - $ref: '#/components/x-bte-kgs-operations/celc-PRODUCES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-COEXISTS_WITH-strd_umls' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-orch' + - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-TREATS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/horm-PREVENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-AFFECTS-phsf' - $ref: '#/components/x-bte-kgs-operations/gngm-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-emod' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-emod-rev' + - $ref: '#/components/x-bte-kgs-operations/nnon-PART_OF-virs' - $ref: '#/components/x-bte-kgs-operations/nnon-PART_OF-virs-rev' + - $ref: '#/components/x-bte-kgs-operations/carb-PART_OF-aapp' - $ref: '#/components/x-bte-kgs-operations/carb-PART_OF-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/diap-USES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-PRODUCES-bdsu-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-inpo' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-strd' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-lipd' - $ref: '#/components/x-bte-kgs-operations/horm-CAUSES-celf-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-AFFECTS-fngs-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-PRODUCES-gngm_ncbigene' + - $ref: '#/components/x-bte-kgs-operations/bacs-CAUSES-phsf' + - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-cgab' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-enzy_umls' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INHIBITS-inch_umls' - $ref: '#/components/x-bte-kgs-operations/sosy-ASSOCIATED_WITH-cgab' @@ -4467,9 +4771,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/antb-STIMULATES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-imft_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-imft_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-mobd' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-anab' - $ref: '#/components/x-bte-kgs-operations/hops-STIMULATES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/orch-same_as-hops' + - $ref: '#/components/x-bte-kgs-operations/orch-same_as-hops-rev' + - $ref: '#/components/x-bte-kgs-operations/elii-INTERACTS_WITH-enzy' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INHIBITS-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-PRECEDES-emod' @@ -4482,9 +4789,11 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-inpo' - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-celf' - $ref: '#/components/x-bte-kgs-operations/irda-CAUSES-celf-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-ADMINISTERED_TO-aggp' - $ref: '#/components/x-bte-kgs-operations/hops-ADMINISTERED_TO-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/horm-AUGMENTS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-COEXISTS_WITH-bacs-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-nnon' - $ref: '#/components/x-bte-kgs-operations/inch-INTERACTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-nsba' - $ref: '#/components/x-bte-kgs-operations/strd-DISRUPTS-neop-rev' @@ -4494,7 +4803,6 @@ paths: - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-CONVERTS_TO-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/gngm_umls-CONVERTS_TO-gngm_ncbigene-rev' - - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-anab' - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-anab-rev' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-celf' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-celf-rev' @@ -4519,6 +4827,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/nusq-AUGMENTS-celf' - $ref: '#/components/x-bte-kgs-operations/nusq-AUGMENTS-celf-rev' - $ref: '#/components/x-bte-kgs-operations/bacs-ADMINISTERED_TO-aggp-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-anab' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-antb' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-AUGMENTS-sosy_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-STIMULATES-horm_ncbigene' @@ -4569,10 +4878,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/eico-AUGMENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-TREATS-comd' - $ref: '#/components/x-bte-kgs-operations/opco_umls-INTERACTS_WITH-aapp_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-fndg' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-fndg-rev' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/imft-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-elii' + - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-elii-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-DISRUPTS-mobd-rev' - $ref: '#/components/x-bte-kgs-operations/opco-AUGMENTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/horm-PRECEDES-topp' @@ -4584,6 +4895,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/nusq-AUGMENTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_umls-STIMULATES-bacs_ncbigene' - $ref: '#/components/x-bte-kgs-operations/virs_umls-LOCATION_OF-gngm_ncbigene' + - $ref: '#/components/x-bte-kgs-operations/inch-AFFECTS-anst' - $ref: '#/components/x-bte-kgs-operations/inch-AFFECTS-anst-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-CAUSES-anab' - $ref: '#/components/x-bte-kgs-operations/bdsu-CAUSES-anab-rev' @@ -4599,6 +4911,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm-PREVENTS-patf' - $ref: '#/components/x-bte-kgs-operations/gngm-PREVENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/orga-MANIFESTATION_OF-phsf' + - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-emod' - $ref: '#/components/x-bte-kgs-operations/bacs-AFFECTS-emod-rev' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-fngs' - $ref: '#/components/x-bte-kgs-operations/patf-AFFECTS-fngs-rev' @@ -4609,13 +4922,16 @@ paths: - $ref: '#/components/x-bte-kgs-operations/medd-USES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/irda_umls-INTERACTS_WITH-gngm_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-bacs' + - $ref: '#/components/x-bte-kgs-operations/bacs-PART_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-lipd' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-imft' - $ref: '#/components/x-bte-kgs-operations/rcpt-INTERACTS_WITH-imft-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-ortf' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-ortf-rev' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-INHIBITS-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-hops' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CAUSES-sosy_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PREVENTS-mobd_umls' - $ref: '#/components/x-bte-kgs-operations/inch-TREATS-sosy-rev' @@ -4639,7 +4955,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/opco-STIMULATES-hops-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-mobd' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-STIMULATES-gngm_ncbigene-rev' + - $ref: '#/components/x-bte-kgs-operations/lipd-CONVERTS_TO-lipd' - $ref: '#/components/x-bte-kgs-operations/bact-PRODUCES-orch' + - $ref: '#/components/x-bte-kgs-operations/bact-PRODUCES-orch-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-phsu' - $ref: '#/components/x-bte-kgs-operations/enzy-PART_OF-cell-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-TREATS-patf-rev' @@ -4656,12 +4974,14 @@ paths: - $ref: '#/components/x-bte-kgs-operations/antb-ADMINISTERED_TO-aggp-rev' - $ref: '#/components/x-bte-kgs-operations/horm-PREDISPOSES-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/imft-CAUSES-acab' + - $ref: '#/components/x-bte-kgs-operations/bacs-TREATS-mobd' - $ref: '#/components/x-bte-kgs-operations/nusq-AUGMENTS-orgf' - $ref: '#/components/x-bte-kgs-operations/opco_umls-COEXISTS_WITH-gngm_ncbigene-rev' - $ref: '#/components/x-bte-kgs-operations/orga-ASSOCIATED_WITH-cgab' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-rcpt' - $ref: '#/components/x-bte-kgs-operations/gngm-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-orch_umls' + - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-orch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/opco-INHIBITS-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/clnd-AFFECTS-acab' - $ref: '#/components/x-bte-kgs-operations/orga-MANIFESTATION_OF-ortf' @@ -4689,7 +5009,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/tisu-PRODUCES-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc-PRODUCES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/orch-PART_OF-celc-rev' + - $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-aggp' - $ref: '#/components/x-bte-kgs-operations/strd-PART_OF-aggp-rev' + - $ref: '#/components/x-bte-kgs-operations/hops-PREVENTS-acab' - $ref: '#/components/x-bte-kgs-operations/cell_umls-LOCATION_OF-bacs_ncbigene' - $ref: '#/components/x-bte-kgs-operations/lipd-PREVENTS-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/phsf-ASSOCIATED_WITH-aapp' @@ -4708,8 +5030,10 @@ paths: - $ref: '#/components/x-bte-kgs-operations/fndg-ASSOCIATED_WITH-dsyn' - $ref: '#/components/x-bte-kgs-operations/fndg-ASSOCIATED_WITH-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-INHIBITS-orch' + - $ref: '#/components/x-bte-kgs-operations/rcpt-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-moft' - $ref: '#/components/x-bte-kgs-operations/dsyn-COEXISTS_WITH-moft-rev' + - $ref: '#/components/x-bte-kgs-operations/anst-LOCATION_OF-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/ortf-PRODUCES-aapp-rev' - $ref: '#/components/x-bte-kgs-operations/imft-STIMULATES-antb' - $ref: '#/components/x-bte-kgs-operations/phsu_ncbigene-ASSOCIATED_WITH-dsyn_umls-rev' @@ -4730,6 +5054,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orch-AFFECTS-anst-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-PREVENTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-TREATS-patf-rev' + - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-nusq' - $ref: '#/components/x-bte-kgs-operations/orch-INHIBITS-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-phsu' - $ref: '#/components/x-bte-kgs-operations/cgab-PREDISPOSES-neop-rev' @@ -4753,9 +5078,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/acab-MANIFESTATION_OF-patf-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-orch' - $ref: '#/components/x-bte-kgs-operations/strd-DISRUPTS-sosy-rev' - - $ref: '#/components/x-bte-kgs-operations/sbst-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/fngs-INTERACTS_WITH-virs' - $ref: '#/components/x-bte-kgs-operations/fngs-INTERACTS_WITH-virs-rev' + - $ref: '#/components/x-bte-kgs-operations/enzy-COEXISTS_WITH-elii-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-anab_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PART_OF-anab_umls-rev' - $ref: '#/components/x-bte-kgs-operations/celf-PRODUCES-rcpt' @@ -4793,6 +5118,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/horm-STIMULATES-moft-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-neop' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-STIMULATES-rcpt_umls-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-sosy' - $ref: '#/components/x-bte-kgs-operations/bacs-PREVENTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-INHIBITS-ortf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-AFFECTS-anab_umls' @@ -4859,10 +5185,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-INTERACTS_WITH-phsu_ncbigene' - $ref: '#/components/x-bte-kgs-operations/opco-INTERACTS_WITH-bodm-rev' - $ref: '#/components/x-bte-kgs-operations/medd-PREVENTS-comd' + - $ref: '#/components/x-bte-kgs-operations/nsba-CONVERTS_TO-hops-rev' - $ref: '#/components/x-bte-kgs-operations/mobd-PRODUCES-tisu-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-hops' + - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-hops-rev' - $ref: '#/components/x-bte-kgs-operations/topp-PRECEDES-antb' - $ref: '#/components/x-bte-kgs-operations/nusq-COEXISTS_WITH-nsba' + - $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-cell' - $ref: '#/components/x-bte-kgs-operations/phsu-STIMULATES-cell-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-INHIBITS-imft-rev' - $ref: '#/components/x-bte-kgs-operations/strd-INTERACTS_WITH-rcpt-rev' @@ -4884,6 +5213,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/opco-AUGMENTS-comd-rev' - $ref: '#/components/x-bte-kgs-operations/phsu-PREVENTS-emod' - $ref: '#/components/x-bte-kgs-operations/phsu-PREVENTS-emod-rev' + - $ref: '#/components/x-bte-kgs-operations/diap-USES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/lbtr-MANIFESTATION_OF-inpo' - $ref: '#/components/x-bte-kgs-operations/lbtr-MANIFESTATION_OF-inpo-rev' - $ref: '#/components/x-bte-kgs-operations/ortf_umls-PRODUCES-horm_ncbigene-rev' @@ -4915,6 +5245,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/carb-AFFECTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-irda' - $ref: '#/components/x-bte-kgs-operations/imft-INTERACTS_WITH-irda-rev' + - $ref: '#/components/x-bte-kgs-operations/bacs-STIMULATES-rcpt' - $ref: '#/components/x-bte-kgs-operations/lipd-CAUSES-celf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-INHIBITS-hops' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-PRODUCES-bdsu_umls-rev' @@ -4925,6 +5256,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/imft-PRECEDES-topp' - $ref: '#/components/x-bte-kgs-operations/imft-PRECEDES-topp-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-inch' + - $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-inch-rev' - $ref: '#/components/x-bte-kgs-operations/nnon-PART_OF-bact-rev' - $ref: '#/components/x-bte-kgs-operations/neop-PRECEDES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/bpoc_umls-PRODUCES-gngm_ncbigene' @@ -4936,6 +5268,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/lbtr-MANIFESTATION_OF-dsyn' - $ref: '#/components/x-bte-kgs-operations/lbtr-MANIFESTATION_OF-dsyn-rev' - $ref: '#/components/x-bte-kgs-operations/biof-PRODUCES-horm' + - $ref: '#/components/x-bte-kgs-operations/biof-PRODUCES-horm-rev' - $ref: '#/components/x-bte-kgs-operations/enzy-ASSOCIATED_WITH-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-aapp' - $ref: '#/components/x-bte-kgs-operations/gngm-PART_OF-aapp-rev' @@ -4945,6 +5278,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/tisu-LOCATION_OF-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/orch-same_as-topp' - $ref: '#/components/x-bte-kgs-operations/orch-same_as-topp-rev' + - $ref: '#/components/x-bte-kgs-operations/mobd-PRODUCES-nsba-rev' - $ref: '#/components/x-bte-kgs-operations/neop-CAUSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/imft-DISRUPTS-acab' - $ref: '#/components/x-bte-kgs-operations/rcpt-COEXISTS_WITH-phsu' @@ -4971,7 +5305,9 @@ paths: - $ref: '#/components/x-bte-kgs-operations/orgf-PRODUCES-vita' - $ref: '#/components/x-bte-kgs-operations/emod-COEXISTS_WITH-inpo' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-eico_umls' + - $ref: '#/components/x-bte-kgs-operations/bacs_umls-INHIBITS-bacs_ncbigene' - $ref: '#/components/x-bte-kgs-operations/bpoc-LOCATION_OF-rcpt' + - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-enzy' - $ref: '#/components/x-bte-kgs-operations/bacs-INHIBITS-enzy-rev' - $ref: '#/components/x-bte-kgs-operations/horm_ncbigene-AFFECTS-orgf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-acab' @@ -5009,10 +5345,12 @@ paths: - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-patf' - $ref: '#/components/x-bte-kgs-operations/patf-PREDISPOSES-patf-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-CONVERTS_TO-orch' + - $ref: '#/components/x-bte-kgs-operations/gngm-CONVERTS_TO-orch-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-CONVERTS_TO-nusq' - $ref: '#/components/x-bte-kgs-operations/nusq-CONVERTS_TO-nusq-rev' - $ref: '#/components/x-bte-kgs-operations/gngm-DISRUPTS-inpo' - $ref: '#/components/x-bte-kgs-operations/virs-LOCATION_OF-lipd' + - $ref: '#/components/x-bte-kgs-operations/phsu-PRODUCES-bacs' - $ref: '#/components/x-bte-kgs-operations/phsu-PRODUCES-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/bacs_ncbigene-AFFECTS-celf_umls-rev' - $ref: '#/components/x-bte-kgs-operations/opco-CAUSES-celf-rev' @@ -5021,6 +5359,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/diap-USES-imft-rev' - $ref: '#/components/x-bte-kgs-operations/inch-DISRUPTS-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-CONVERTS_TO-inch_umls' + - $ref: '#/components/x-bte-kgs-operations/gngm_ncbigene-CONVERTS_TO-inch_umls-rev' - $ref: '#/components/x-bte-kgs-operations/rcpt-ASSOCIATED_WITH-sosy' - $ref: '#/components/x-bte-kgs-operations/rcpt-ASSOCIATED_WITH-sosy-rev' - $ref: '#/components/x-bte-kgs-operations/lipd-PREVENTS-inpo-rev' @@ -5030,6 +5369,8 @@ paths: - $ref: '#/components/x-bte-kgs-operations/nnon-AFFECTS-moft-rev' - $ref: '#/components/x-bte-kgs-operations/imft-AUGMENTS-phsf' - $ref: '#/components/x-bte-kgs-operations/nnon-AUGMENTS-sosy-rev' + - $ref: '#/components/x-bte-kgs-operations/carb-same_as-bacs' + - $ref: '#/components/x-bte-kgs-operations/carb-same_as-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/horm-COEXISTS_WITH-rcpt-rev' - $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-rcpt' - $ref: '#/components/x-bte-kgs-operations/nusq-INHIBITS-rcpt-rev' @@ -5040,11 +5381,13 @@ paths: - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-aapp_umls' - $ref: '#/components/x-bte-kgs-operations/aapp_ncbigene-CONVERTS_TO-aapp_umls-rev' - $ref: '#/components/x-bte-kgs-operations/celc_umls-LOCATION_OF-bacs_ncbigene' + - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-biof' - $ref: '#/components/x-bte-kgs-operations/bacs-AUGMENTS-biof-rev' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-gngm' - $ref: '#/components/x-bte-kgs-operations/bact-INTERACTS_WITH-gngm-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-INTERACTS_WITH-imft-rev' - $ref: '#/components/x-bte-kgs-operations/aapp-PRODUCES-strd' + - $ref: '#/components/x-bte-kgs-operations/bacs-COEXISTS_WITH-opco' - $ref: '#/components/x-bte-kgs-operations/inch-TREATS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/irda-DISRUPTS-orgf' - $ref: '#/components/x-bte-kgs-operations/irda-DISRUPTS-orgf-rev' @@ -5067,6 +5410,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/inch-DISRUPTS-anst-rev' - $ref: '#/components/x-bte-kgs-operations/imft_ncbigene-ASSOCIATED_WITH-neop_umls-rev' - $ref: '#/components/x-bte-kgs-operations/strd-CONVERTS_TO-horm-rev' + - $ref: '#/components/x-bte-kgs-operations/opco-INHIBITS-orch-rev' - $ref: '#/components/x-bte-kgs-operations/fngs-LOCATION_OF-eico' - $ref: '#/components/x-bte-kgs-operations/bact-CAUSES-mobd' - $ref: '#/components/x-bte-kgs-operations/clnd-CAUSES-acab' @@ -5083,6 +5427,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/rcpt-AFFECTS-patf' - $ref: '#/components/x-bte-kgs-operations/rcpt-AFFECTS-patf-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-COEXISTS_WITH-rcpt-rev' + - $ref: '#/components/x-bte-kgs-operations/horm-CONVERTS_TO-strd' - $ref: '#/components/x-bte-kgs-operations/topp-COMPLICATES-orgf' - $ref: '#/components/x-bte-kgs-operations/topp-COMPLICATES-orgf-rev' - $ref: '#/components/x-bte-kgs-operations/inch-COEXISTS_WITH-nusq-rev' @@ -5113,6 +5458,7 @@ paths: - $ref: '#/components/x-bte-kgs-operations/anab-AFFECTS-bact' - $ref: '#/components/x-bte-kgs-operations/anab-AFFECTS-bact-rev' - $ref: '#/components/x-bte-kgs-operations/medd-USES-carb' + - $ref: '#/components/x-bte-kgs-operations/horm-CONVERTS_TO-bacs-rev' - $ref: '#/components/x-bte-kgs-operations/nsba-DISRUPTS-celc-rev' - $ref: '#/components/x-bte-kgs-operations/bdsu-CAUSES-cgab' - $ref: '#/components/x-bte-kgs-operations/irda-INHIBITS-inch' @@ -6127,7 +6473,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided @@ -6139,7 +6485,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -6211,7 +6557,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -6247,7 +6593,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -6646,6 +6992,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bdsu-LOCATION_OF-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:bdsu AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: AnatomicalEntity + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-PART_OF-celc: - supportBatch: True useTemplating: True @@ -7311,13 +7681,37 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bpoc-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:bpoc AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' dsyn-CAUSES-dsyn: - supportBatch: True useTemplating: True @@ -7419,7 +7813,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -7455,7 +7849,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -8171,7 +8565,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -8207,7 +8601,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -8751,7 +9145,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -8763,7 +9157,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -8883,7 +9277,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -8919,7 +9313,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -9563,7 +9957,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -9599,7 +9993,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -9899,7 +10293,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -9939,7 +10333,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -10563,7 +10957,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -10599,7 +10993,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -11115,7 +11509,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -11151,7 +11545,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -11187,7 +11581,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -11223,7 +11617,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -11235,7 +11629,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -11283,7 +11677,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -11319,7 +11713,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -11550,6 +11944,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-STIMULATES-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:gngm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orch-STIMULATES-gngm-rev: - supportBatch: True useTemplating: True @@ -12339,7 +12761,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -12351,7 +12773,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -12363,7 +12785,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -12375,7 +12797,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -12399,7 +12821,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -12415,7 +12837,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -12539,7 +12961,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -12551,7 +12973,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -12563,7 +12985,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -12575,7 +12997,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -12966,6 +13388,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-INTERACTS_WITH-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:aapp + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-INTERACTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -12990,6 +13436,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:gngm AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-gngm-rev: - supportBatch: True useTemplating: True @@ -13007,7 +13481,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -13042,12 +13516,36 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-AFFECTS-celf: + aapp-INTERACTS_WITH-orch-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:aapp + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -13083,7 +13581,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -13791,7 +14289,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -13947,7 +14445,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -13959,7 +14457,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -14511,7 +15009,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -15502,6 +16000,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-PART_OF-bpoc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:bpoc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nsba-PART_OF-bpoc-rev: - supportBatch: True useTemplating: True @@ -16407,7 +16929,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -16419,7 +16941,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -16679,7 +17201,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided @@ -16691,7 +17213,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -16871,7 +17393,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -16887,7 +17409,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -17327,7 +17849,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -17363,7 +17885,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -17466,6 +17988,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CAUSES-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -17483,7 +18029,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -17719,7 +18265,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -17755,7 +18301,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -17818,6 +18364,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + orch-AFFECTS-orgf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:orgf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-orgf-rev: - supportBatch: True useTemplating: True @@ -17847,7 +18417,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -17887,7 +18457,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -18066,6 +18636,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CAUSES-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-CAUSES-patf-rev: - supportBatch: True useTemplating: True @@ -18083,7 +18677,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -18687,7 +19281,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -18699,7 +19293,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -18715,7 +19309,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -18727,7 +19321,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -18738,6 +19332,82 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-INTERACTS_WITH-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:bacs + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:orch + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + orch_umls-STIMULATES-gngm_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:gngm AND + _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orch_umls-STIMULATES-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -18859,7 +19529,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -18875,7 +19545,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -18951,7 +19621,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -18987,7 +19657,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -19107,7 +19777,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -19119,7 +19789,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -19258,6 +19928,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bact-LOCATION_OF-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:bact AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Bacterium + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-PART_OF-bact_umls: - supportBatch: True useTemplating: True @@ -19554,6 +20248,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:celf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' food-CAUSES-dsyn: - supportBatch: True useTemplating: True @@ -20355,7 +21073,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -20391,7 +21109,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -20614,6 +21332,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-ASSOCIATED_WITH-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:dsyn + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm-ASSOCIATED_WITH-dsyn-rev: - supportBatch: True useTemplating: True @@ -20667,7 +21409,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -20734,6 +21476,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-inch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:inch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-COEXISTS_WITH-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:bacs + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm_umls-STIMULATES-gngm_ncbigene: - supportBatch: True useTemplating: True @@ -21195,7 +21985,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -21231,7 +22021,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -21555,7 +22345,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -21591,7 +22381,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -21766,12 +22556,40 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:bacs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-bacs-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -21783,7 +22601,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -21835,7 +22653,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -22018,6 +22836,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + lipd-PART_OF-bact: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:bact AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Bacterium + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-bact-rev: - supportBatch: True useTemplating: True @@ -22042,12 +22884,40 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - orch-STIMULATES-bacs-rev: + orch-STIMULATES-bacs: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:bacs AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased + orch-STIMULATES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -22299,7 +23169,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -22339,7 +23209,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -22446,6 +23316,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + bacs-DISRUPTS-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:celf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-celf-rev: - supportBatch: True useTemplating: True @@ -22463,13 +23357,61 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-COEXISTS_WITH-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:bacs AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:orch + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cell-LOCATION_OF-bsoj: - supportBatch: True useTemplating: True @@ -22535,7 +23477,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -22547,7 +23489,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -22758,6 +23700,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:orch + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:bacs + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' imft-ASSOCIATED_WITH-dsyn: - supportBatch: True useTemplating: True @@ -23003,7 +23993,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -23058,6 +24048,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-AFFECTS-ortf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:ortf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-CAUSES-comd: - supportBatch: True useTemplating: True @@ -23394,6 +24408,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp-COEXISTS_WITH-phsu-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:aapp + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-INTERACTS_WITH-cell: - supportBatch: True useTemplating: True @@ -23514,6 +24552,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + hops-CAUSES-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-CAUSES-inpo-rev: - supportBatch: True useTemplating: True @@ -23531,7 +24593,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -23658,6 +24720,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-PART_OF-celc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:celc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-celc-rev: - supportBatch: True useTemplating: True @@ -23815,7 +24901,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -23834,6 +24920,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + tisu-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:tisu AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' orch-INHIBITS-orch: - supportBatch: True useTemplating: True @@ -23862,6 +24972,58 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + orch-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:orch AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased + bacs-CAUSES-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' sosy-PROCESS_OF-aggp: - supportBatch: True useTemplating: True @@ -23958,6 +25120,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-AFFECTS-moft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:moft AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: MolecularActivity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' phsu-AFFECTS-moft-rev: - supportBatch: True useTemplating: True @@ -24103,7 +25289,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -24115,7 +25301,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -24758,6 +25944,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-AUGMENTS-moft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:moft AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: MolecularActivity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased phsu-AUGMENTS-moft-rev: - supportBatch: True useTemplating: True @@ -24786,6 +26000,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs_umls-INHIBITS-gngm_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:gngm AND _exists_:object.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs_umls-INHIBITS-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -24803,7 +26045,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -24831,7 +26073,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -24843,7 +26085,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -24862,6 +26104,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-orgf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:orgf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orgf-AFFECTS-orga: - supportBatch: True useTemplating: True @@ -25083,7 +26349,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -25119,7 +26385,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -25143,7 +26409,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -25155,7 +26421,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -25203,7 +26469,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -25239,7 +26505,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -25411,7 +26677,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -25459,13 +26725,37 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + fngs-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:fngs AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Fungus + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cell-LOCATION_OF-diap: - supportBatch: True useTemplating: True @@ -25543,7 +26833,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -25579,7 +26869,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -25639,7 +26929,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -25675,7 +26965,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -26022,6 +27312,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-PREVENTS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PREVENTS-dsyn-rev: - supportBatch: True useTemplating: True @@ -26039,7 +27353,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -26363,7 +27677,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -26459,7 +27773,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -26495,7 +27809,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -27066,6 +28380,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:orch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-INTERACTS_WITH-gngm_umls: - supportBatch: True useTemplating: True @@ -27131,7 +28469,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -27279,7 +28617,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -27291,7 +28629,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -27458,6 +28796,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-bpoc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:bpoc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -27870,6 +29232,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nnon-ADMINISTERED_TO-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ADMINISTERED_TO AND object.semantic_type_abbreviation:cell + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-ADMINISTERED_TO-cell-rev: - supportBatch: True useTemplating: True @@ -28138,6 +29524,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + aapp-STIMULATES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:aapp AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased aapp-AUGMENTS-tisu: - supportBatch: True useTemplating: True @@ -28654,6 +30068,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-COEXISTS_WITH-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:aapp AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-COEXISTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -28899,13 +30337,37 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + cell-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:cell AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm_ncbigene-PART_OF-neop_umls: - supportBatch: True useTemplating: True @@ -29130,6 +30592,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-moft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:moft AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: MolecularActivity + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-moft-rev: - supportBatch: True useTemplating: True @@ -29147,7 +30633,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -29423,7 +30909,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -29818,6 +31304,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-ASSOCIATED_WITH-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:neop + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' cgab-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -29847,7 +31357,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -29883,7 +31393,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -29895,7 +31405,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -29931,7 +31441,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -30199,7 +31709,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -30211,7 +31721,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -30331,7 +31841,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -30371,7 +31881,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -30447,7 +31957,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -30654,6 +32164,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-AFFECTS-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:cell AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-cell-rev: - supportBatch: True useTemplating: True @@ -30706,6 +32240,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + aapp-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:aapp AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased food-AFFECTS-orgf: - supportBatch: True useTemplating: True @@ -30778,6 +32340,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-AFFECTS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-patf-rev: - supportBatch: True useTemplating: True @@ -30855,7 +32441,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -30974,6 +32560,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-AFFECTS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm_umls-STIMULATES-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -31055,7 +32665,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -31074,6 +32684,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + bacs-AUGMENTS-ortf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:ortf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-ortf-rev: - supportBatch: True useTemplating: True @@ -31091,7 +32729,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -31102,6 +32740,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + phsu-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:phsu + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' orgf-AFFECTS-dsyn-rev: - supportBatch: True useTemplating: True @@ -31207,7 +32869,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -31519,7 +33181,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -31711,7 +33373,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -31723,7 +33385,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -32267,7 +33929,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -32283,7 +33945,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -32519,7 +34181,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -32770,7 +34432,31 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-INTERACTS_WITH-lipd: + bacs-COEXISTS_WITH-phsu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:phsu AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-COEXISTS_WITH-lipd: - supportBatch: True useTemplating: True inputs: @@ -32780,6 +34466,30 @@ components: body: q: '{{ queryInputs }}' scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:lipd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INTERACTS_WITH-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls parameters: fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 @@ -32810,6 +34520,30 @@ components: filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:hops AND _exists_:subject.umls AND pmid_count:>3 outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:elii + AND _exists_:subject.umls AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule predicate: interacts_with @@ -33106,6 +34840,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-PART_OF-tisu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:tisu AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nusq-COEXISTS_WITH-aapp: - supportBatch: True useTemplating: True @@ -33279,7 +35037,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -33315,7 +35073,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -33394,6 +35152,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-phsf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:phsf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-CAUSES-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' phsu-TREATS-acab: - supportBatch: True useTemplating: True @@ -33466,6 +35272,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + nnon-AFFECTS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-AFFECTS-neop-rev: - supportBatch: True useTemplating: True @@ -33695,7 +35525,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -33967,7 +35797,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -34003,7 +35833,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -34306,6 +36136,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:elii + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' antb-INTERACTS_WITH-antb: - supportBatch: True useTemplating: True @@ -34474,6 +36328,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-CAUSES-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-CAUSES-sosy-rev: - supportBatch: True useTemplating: True @@ -34491,7 +36369,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -34503,7 +36381,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -34527,7 +36405,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -34818,6 +36696,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INTERACTS_WITH-phsu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:phsu + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-PRODUCES-orch: - supportBatch: True useTemplating: True @@ -34842,6 +36744,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-PRODUCES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:gngm AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-PART_OF-emst: - supportBatch: True useTemplating: True @@ -34899,7 +36825,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -35022,6 +36948,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-STIMULATES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:orch AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased elii-INTERACTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -35534,12 +37488,36 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - bacs-COEXISTS_WITH-gngm: + elii-COEXISTS_WITH-bacs-rev: - supportBatch: True useTemplating: True inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:elii + AND _exists_:subject.umls AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -35575,7 +37553,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -35611,7 +37589,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -35635,7 +37613,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -36190,6 +38168,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-INTERACTS_WITH-inch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:inch + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' aapp_ncbigene-DISRUPTS-orgf_umls: - supportBatch: True useTemplating: True @@ -36406,6 +38408,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch_umls-INTERACTS_WITH-aapp_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:aapp + AND _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' orch_umls-INTERACTS_WITH-aapp_ncbigene-rev: - supportBatch: True useTemplating: True @@ -36483,7 +38509,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -36603,7 +38629,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -36627,7 +38653,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -36651,7 +38677,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -36687,7 +38713,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -36927,13 +38953,65 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bpoc-PRODUCES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:bpoc AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-STIMULATES-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:aapp AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased lipd-STIMULATES-aapp-rev: - supportBatch: True useTemplating: True @@ -36962,6 +39040,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + inch-INTERACTS_WITH-elii-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:inch + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' bpoc-LOCATION_OF-emod: - supportBatch: True useTemplating: True @@ -37090,6 +39192,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + inch-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:inch + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm_ncbigene-COEXISTS_WITH-bacs_umls: - supportBatch: True useTemplating: True @@ -37107,7 +39233,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -37119,7 +39245,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -37339,7 +39465,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -37375,7 +39501,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -37563,7 +39689,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -37599,7 +39725,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -38082,6 +40208,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-COEXISTS_WITH-imft: - supportBatch: True useTemplating: True @@ -38135,7 +40285,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -38343,7 +40493,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -38378,6 +40528,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + lipd-PART_OF-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:cell AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-cell-rev: - supportBatch: True useTemplating: True @@ -38522,6 +40696,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-PREDISPOSES-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:dsyn AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-PREDISPOSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -38594,6 +40792,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch_umls-INTERACTS_WITH-gngm_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:gngm + AND _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' dora-TREATS-sosy: - supportBatch: True useTemplating: True @@ -38866,6 +41088,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-COEXISTS_WITH-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:hops AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-COEXISTS_WITH-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:hops + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-AUGMENTS-orgf_umls: - supportBatch: True useTemplating: True @@ -38923,7 +41193,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -38971,7 +41241,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -39083,7 +41353,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -39114,6 +41384,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp_ncbigene-INTERACTS_WITH-horm_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:aapp + AND _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' dsyn-DISRUPTS-cell: - supportBatch: True useTemplating: True @@ -39179,7 +41473,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -39191,7 +41485,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -39478,6 +41772,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + aapp_ncbigene-STIMULATES-horm_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:aapp AND + _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased nsba-AFFECTS-orgf-rev: - supportBatch: True useTemplating: True @@ -39595,13 +41917,37 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + celc-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:celc AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' bdsu_umls-LOCATION_OF-gngm_ncbigene: - supportBatch: True useTemplating: True @@ -39715,7 +42061,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -39727,7 +42073,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -39818,6 +42164,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:aapp AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-aapp-rev: - supportBatch: True useTemplating: True @@ -39835,7 +42209,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -39851,7 +42225,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -39887,7 +42261,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided @@ -39899,7 +42273,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -40114,6 +42488,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-ASSOCIATED_WITH-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:mobd + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' aapp-DISRUPTS-bpoc: - supportBatch: True useTemplating: True @@ -40327,7 +42725,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -40506,6 +42904,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm_ncbigene-INTERACTS_WITH-orch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' mobd-MANIFESTATION_OF-dsyn: - supportBatch: True useTemplating: True @@ -41095,7 +43517,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -41287,7 +43709,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -41363,7 +43785,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -41399,7 +43821,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -41579,7 +44001,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -42119,7 +44541,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -42131,7 +44553,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -42270,6 +44692,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-ASSOCIATED_WITH-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:patf + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm-ASSOCIATED_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -42299,7 +44745,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -42370,6 +44816,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:phsu + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' horm-CAUSES-patf-rev: - supportBatch: True useTemplating: True @@ -42463,7 +44933,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -42522,6 +44992,30 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-COEXISTS_WITH-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:elii AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' cell-PRODUCES-gngm: - supportBatch: True useTemplating: True @@ -42594,6 +45088,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-COEXISTS_WITH-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:lipd + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nsba-AUGMENTS-ortf-rev: - supportBatch: True useTemplating: True @@ -42843,7 +45361,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -42855,7 +45373,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -42867,7 +45385,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -42942,6 +45460,62 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-INHIBITS-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:orch AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased + bacs-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:bacs AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased gngm_ncbigene-ASSOCIATED_WITH-mobd_umls: - supportBatch: True useTemplating: True @@ -42994,6 +45568,30 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-PREDISPOSES-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:neop AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' aapp_ncbigene-INTERACTS_WITH-cell_umls-rev: - supportBatch: True useTemplating: True @@ -43071,7 +45669,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -43159,7 +45757,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -43171,7 +45769,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -43266,6 +45864,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' imft-AUGMENTS-ortf: - supportBatch: True useTemplating: True @@ -43430,6 +46052,62 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + bacs-STIMULATES-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:orch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased + bacs-STIMULATES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:bacs AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased aapp-CAUSES-mobd: - supportBatch: True useTemplating: True @@ -43591,7 +46269,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -43603,7 +46281,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -43718,6 +46396,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-neop-rev: - supportBatch: True useTemplating: True @@ -43735,7 +46437,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -43795,7 +46497,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -43838,6 +46540,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-INTERACTS_WITH-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:hops + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:horm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' phsu-PREDISPOSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -43910,6 +46660,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-PREVENTS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PREVENTS-inpo-rev: - supportBatch: True useTemplating: True @@ -43927,7 +46701,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -44058,6 +46832,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:horm + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' patf-COEXISTS_WITH-anab: - supportBatch: True useTemplating: True @@ -44139,7 +46937,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -44175,7 +46973,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -44235,7 +47033,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -44247,7 +47045,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -44259,7 +47057,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -44271,7 +47069,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -44367,13 +47165,37 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: location_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + plnt-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:plnt AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Plant + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' ortf-PROCESS_OF-aggp-rev: - supportBatch: True useTemplating: True @@ -44518,12 +47340,36 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-phsf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:phsf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-STIMULATES-bacs-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -44535,7 +47381,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -44954,6 +47800,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:hops + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' horm-COEXISTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -44983,7 +47853,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45059,7 +47929,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45326,6 +48196,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-INTERACTS_WITH-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:lipd + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' aapp-PART_OF-aapp: - supportBatch: True useTemplating: True @@ -45435,7 +48329,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45526,7 +48420,7 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - horm-STIMULATES-bacs-rev: + cell-PRODUCES-horm-rev: - supportBatch: True useTemplating: True inputs: @@ -45536,6 +48430,30 @@ components: body: q: '{{ queryInputs }}' scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:cell AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-STIMULATES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls parameters: fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 @@ -45599,7 +48517,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -45615,7 +48533,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45638,6 +48556,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-INTERACTS_WITH-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:gngm + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-INTERACTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -45667,7 +48609,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45703,7 +48645,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -45875,7 +48817,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -45891,7 +48833,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -45962,30 +48904,6 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - sbst-CAUSES-patf: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:patf AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: PathologicalProcess - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' sbst-CAUSES-patf-rev: - supportBatch: True useTemplating: True @@ -46063,7 +48981,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -46082,6 +49000,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + lipd-INTERACTS_WITH-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:lipd + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' orgf-AFFECTS-mobd: - supportBatch: True useTemplating: True @@ -46123,7 +49065,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -46135,7 +49077,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -46202,6 +49144,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch_umls-COEXISTS_WITH-gngm_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:gngm AND + _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' orch_umls-COEXISTS_WITH-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -46450,6 +49416,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-AFFECTS-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-COEXISTS_WITH-aapp-rev: - supportBatch: True useTemplating: True @@ -46567,7 +49557,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -46627,7 +49617,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -46650,6 +49640,30 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-AFFECTS-celc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:celc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-celc-rev: - supportBatch: True useTemplating: True @@ -46778,12 +49792,40 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased - bacs-COEXISTS_WITH-imft: + horm-STIMULATES-horm-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:horm AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased + bacs-COEXISTS_WITH-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -46819,7 +49861,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -47006,30 +50048,6 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased - sbst-CAUSES-dsyn: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' sbst-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -47159,7 +50177,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -47467,7 +50485,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -47810,6 +50828,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-INTERACTS_WITH-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:carb + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + carb-INTERACTS_WITH-carb-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:carb + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' opco-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -47882,6 +50948,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nnon-INTERACTS_WITH-nnon: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:nnon + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + nnon-INTERACTS_WITH-nnon-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:nnon + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' rcpt-COEXISTS_WITH-bacs: - supportBatch: True useTemplating: True @@ -47899,7 +51013,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -47911,7 +51025,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -47935,7 +51049,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -48030,6 +51144,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-tisu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:tisu AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-PRODUCES-horm: - supportBatch: True useTemplating: True @@ -48266,6 +51404,90 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + phsu-INHIBITS-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:phsu AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased + hops-STIMULATES-nsba: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:nsba AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased + hops-STIMULATES-nsba-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:hops AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased dora-PREDISPOSES-neop: - supportBatch: True useTemplating: True @@ -48314,6 +51536,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-PREDISPOSES-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:patf AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-PREDISPOSES-patf-rev: - supportBatch: True useTemplating: True @@ -48338,6 +51584,58 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-STIMULATES-nsba-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:nsba AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased + bacs-DISRUPTS-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:cell AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-cell-rev: - supportBatch: True useTemplating: True @@ -48355,7 +51653,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -48539,7 +51837,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -48719,7 +52017,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -48747,7 +52045,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -48914,6 +52212,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-DISRUPTS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-DISRUPTS-patf-rev: - supportBatch: True useTemplating: True @@ -48931,7 +52253,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -49027,13 +52349,37 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp-PRODUCES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:aapp AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' orch-CAUSES-cgab: - supportBatch: True useTemplating: True @@ -49106,6 +52452,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-antb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:antb + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' acab-COEXISTS_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -49183,7 +52553,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -49211,7 +52581,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -49262,6 +52632,30 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-AFFECTS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' biof-AFFECTS-orgf: - supportBatch: True useTemplating: True @@ -49382,6 +52776,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-nsba: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:nsba + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' diap-DIAGNOSES-comd: - supportBatch: True useTemplating: True @@ -49627,13 +53045,37 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-biof: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:biof AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Phenomenon + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-AFFECTS-biof-rev: - supportBatch: True useTemplating: True @@ -49754,6 +53196,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-COEXISTS_WITH-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:carb + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' elii-AUGMENTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -49967,7 +53433,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -50002,6 +53468,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-COEXISTS_WITH-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:gngm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-COEXISTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -50195,7 +53685,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -50463,7 +53953,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -50475,7 +53965,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -50542,6 +54032,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-COEXISTS_WITH-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:carb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nsba-ASSOCIATED_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -50671,7 +54185,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -51015,7 +54529,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -51139,7 +54653,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -51179,7 +54693,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -51363,7 +54877,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -51399,7 +54913,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -51458,6 +54972,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-INHIBITS-inch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:inch AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased nsba-CAUSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -51506,6 +55048,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + irda-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:irda + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiagnosticAid + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-PRODUCES-eico: - supportBatch: True useTemplating: True @@ -51679,7 +55245,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -51798,6 +55364,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + antb-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:antb + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cell-PRODUCES-nnon: - supportBatch: True useTemplating: True @@ -51827,7 +55417,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -51934,6 +55524,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + elii-INHIBITS-elii-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:elii AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased gngm-PRODUCES-nnon: - supportBatch: True useTemplating: True @@ -51991,7 +55609,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -52247,7 +55865,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -52283,13 +55901,61 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CONVERTS_TO-orch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:orch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-CONVERTS_TO-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:bacs AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' dora-PREVENTS-sosy: - supportBatch: True useTemplating: True @@ -52543,7 +56209,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -52666,6 +56332,54 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-CAUSES-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + nsba-INTERACTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:nsba + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-COEXISTS_WITH-inch: - supportBatch: True useTemplating: True @@ -52690,6 +56404,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-COEXISTS_WITH-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' neop-MANIFESTATION_OF-neop: - supportBatch: True useTemplating: True @@ -52762,6 +56500,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm_ncbigene-COEXISTS_WITH-inch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' sosy-PREDISPOSES-mobd: - supportBatch: True useTemplating: True @@ -52831,7 +56593,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -52843,7 +56605,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -53054,6 +56816,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-STIMULATES-phsu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:phsu AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased gngm-COEXISTS_WITH-nusq: - supportBatch: True useTemplating: True @@ -53171,7 +56961,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -53303,7 +57093,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -53475,7 +57265,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -53570,6 +57360,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-INHIBITS-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:elii AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased horm-AFFECTS-patf-rev: - supportBatch: True useTemplating: True @@ -53690,6 +57508,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-TREATS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-TREATS-dsyn-rev: - supportBatch: True useTemplating: True @@ -53707,7 +57549,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: subject_of_treatment_application_or_study_for_treatment_by source: "infores:semmeddb" knowledge_level: not_provided @@ -53731,7 +57573,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -53810,6 +57652,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-INTERACTS_WITH-irda: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:irda + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiagnosticAid + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-INTERACTS_WITH-irda-rev: - supportBatch: True useTemplating: True @@ -54006,6 +57872,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + antb-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:antb + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' imft_umls-STIMULATES-gngm_ncbigene: - supportBatch: True useTemplating: True @@ -54079,7 +57969,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -54310,6 +58200,30 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + orch-PREDISPOSES-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:inpo AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' imft-AFFECTS-cell: - supportBatch: True useTemplating: True @@ -54387,7 +58301,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -54410,6 +58324,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + inch-INHIBITS-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:inch AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased ortf-PROCESS_OF-emod-rev: - supportBatch: True useTemplating: True @@ -54631,7 +58573,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -54667,7 +58609,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -54702,6 +58644,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-AFFECTS-sosy-rev: - supportBatch: True useTemplating: True @@ -54719,7 +58685,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -54743,7 +58709,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -55035,7 +59001,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -55723,7 +59689,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -55759,13 +59725,65 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-PREDISPOSES-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:comd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-AUGMENTS-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-comd-rev: - supportBatch: True useTemplating: True @@ -55783,7 +59801,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -55890,6 +59908,82 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + eico-INTERACTS_WITH-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:eico + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + eico-INTERACTS_WITH-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:eico + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-INHIBITS-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:horm AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased gngm_ncbigene-AUGMENTS-celc_umls-rev: - supportBatch: True useTemplating: True @@ -56143,7 +60237,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -56179,7 +60273,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -56191,7 +60285,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -56214,6 +60308,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-AUGMENTS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orch-AUGMENTS-patf-rev: - supportBatch: True useTemplating: True @@ -56379,7 +60501,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -56706,12 +60828,40 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - bacs-INTERACTS_WITH-bodm: + bacs-INHIBITS-phsu: - supportBatch: True useTemplating: True inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:phsu AND _exists_:object.umls + AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased + bacs-INTERACTS_WITH-bodm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -56747,7 +60897,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -56879,7 +61029,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -56915,13 +61065,37 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + inch-ASSOCIATED_WITH-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:inpo + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-ASSOCIATED_WITH-inpo-rev: - supportBatch: True useTemplating: True @@ -57146,6 +61320,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + neop-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:neop AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-DISRUPTS-cell_umls: - supportBatch: True useTemplating: True @@ -57218,12 +61416,12 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-inpo: + elii-STIMULATES-inch: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: ChemicalEntity + semantic: SmallMolecule requestBody: body: q: '{{ queryInputs }}' @@ -57231,17 +61429,49 @@ components: parameters: fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls - AND pmid_count:>3 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:inch AND + _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: PathologicalProcess - predicate: causes + semantic: SmallMolecule + predicate: affects source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased + elii-STIMULATES-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:elii AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased nsba-COEXISTS_WITH-orch-rev: - supportBatch: True useTemplating: True @@ -57595,7 +61825,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -57755,7 +61985,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -57867,7 +62097,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -57999,7 +62229,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -58011,7 +62241,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -58030,6 +62260,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd_umls-STIMULATES-aapp_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:aapp AND + _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased nnon-AFFECTS-patf-rev: - supportBatch: True useTemplating: True @@ -58059,7 +62317,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -58154,6 +62412,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp_ncbigene-COEXISTS_WITH-phsu_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:aapp + AND _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + orch-INTERACTS_WITH-bodm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:bodm + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Device + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-INTERACTS_WITH-bodm-rev: - supportBatch: True useTemplating: True @@ -58347,7 +62653,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -58714,30 +63020,6 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - sbst-AFFECTS-moft: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:AFFECTS AND object.semantic_type_abbreviation:moft AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: MolecularActivity - predicate: affects - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' sbst-AFFECTS-moft-rev: - supportBatch: True useTemplating: True @@ -58810,6 +63092,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:nsba + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cgab-AFFECTS-orgf-rev: - supportBatch: True useTemplating: True @@ -58887,7 +63193,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -58923,7 +63229,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -59055,7 +63361,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -59091,7 +63397,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -59174,6 +63480,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-STIMULATES-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:elii AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased aapp_ncbigene-STIMULATES-lipd_umls: - supportBatch: True useTemplating: True @@ -59350,6 +63684,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba_umls-COEXISTS_WITH-aapp_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:aapp AND + _exists_:object.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' nsba_umls-COEXISTS_WITH-aapp_ncbigene-rev: - supportBatch: True useTemplating: True @@ -59502,6 +63860,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + inch-STIMULATES-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:inch AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased inpo-COEXISTS_WITH-emod: - supportBatch: True useTemplating: True @@ -59682,6 +64068,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-STIMULATES-nsba-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:phsu AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased inch-CAUSES-phsf-rev: - supportBatch: True useTemplating: True @@ -59730,6 +64144,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + horm-AUGMENTS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased aapp-AUGMENTS-inpo: - supportBatch: True useTemplating: True @@ -59899,7 +64341,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -59915,7 +64357,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -59943,7 +64385,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -60310,6 +64752,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bodm-INTERACTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:bodm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Device + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' tisu-PART_OF-fngs-rev: - supportBatch: True useTemplating: True @@ -60358,6 +64824,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-PREVENTS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-PREVENTS-patf-rev: - supportBatch: True useTemplating: True @@ -60375,7 +64865,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -60598,6 +65088,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-DISRUPTS-celc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:celc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-DISRUPTS-celc-rev: - supportBatch: True useTemplating: True @@ -60646,6 +65160,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:celf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bodm-INTERACTS_WITH-inch: - supportBatch: True useTemplating: True @@ -60670,6 +65212,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:horm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-AFFECTS-comd: - supportBatch: True useTemplating: True @@ -60915,7 +65481,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -61082,6 +65648,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + nsba-ASSOCIATED_WITH-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:sosy + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nsba-ASSOCIATED_WITH-sosy-rev: - supportBatch: True useTemplating: True @@ -61230,6 +65820,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-DISRUPTS-bpoc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:bpoc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-DISRUPTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -61323,7 +65937,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -61554,6 +66168,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-CAUSES-cgab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:cgab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-AUGMENTS-fndg: - supportBatch: True useTemplating: True @@ -61690,6 +66328,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INHIBITS-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:lipd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased nsba-DISRUPTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -61755,7 +66421,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -62062,6 +66728,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-INHIBITS-nsba: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:nsba AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased hops-INHIBITS-nsba-rev: - supportBatch: True useTemplating: True @@ -62079,7 +66773,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -62186,6 +66880,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-CONVERTS_TO-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:bacs AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-CONVERTS_TO-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:orch AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' bdsu-PART_OF-aggp: - supportBatch: True useTemplating: True @@ -62282,6 +67024,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp-CONVERTS_TO-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:aapp AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cgab-COEXISTS_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -62359,7 +67125,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -62382,6 +67148,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + bacs-AUGMENTS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orgf-PRODUCES-horm: - supportBatch: True useTemplating: True @@ -62406,6 +67200,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orgf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:orgf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' comd-PROCESS_OF-emod-rev: - supportBatch: True useTemplating: True @@ -62543,7 +67361,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -62591,7 +67409,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -62626,6 +67444,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INTERACTS_WITH-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:strd + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-AUGMENTS-neop_umls-rev: - supportBatch: True useTemplating: True @@ -62654,6 +67496,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + hops-INHIBITS-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:hops AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased nusq-PART_OF-fngs: - supportBatch: True useTemplating: True @@ -62778,198 +67648,226 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased - bact-INTERACTS_WITH-virs: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Bacterium - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:virs - AND _exists_:object.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Virus - predicate: interacts_with - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - bact-INTERACTS_WITH-virs-rev: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Virus - requestBody: - body: - q: '{{ queryInputs }}' - scopes: object.umls - parameters: - fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:bact - AND _exists_:subject.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Bacterium - predicate: interacts_with - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-subj' - food-PREDISPOSES-fndg: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Food - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:fndg AND - _exists_:object.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: DiseaseOrPhenotypicFeature - predicate: predisposes_to_condition - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - food-PREDISPOSES-fndg-rev: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: DiseaseOrPhenotypicFeature - requestBody: - body: - q: '{{ queryInputs }}' - scopes: object.umls - parameters: - fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:PREDISPOSES AND subject.semantic_type_abbreviation:food AND - _exists_:subject.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Food - predicate: condition_predisposed_by - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-subj' - phsf-PRECEDES-orgf-rev: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: PhysiologicalProcess - requestBody: - body: - q: '{{ queryInputs }}' - scopes: object.umls - parameters: - fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:PRECEDES AND subject.semantic_type_abbreviation:phsf AND _exists_:subject.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: PhysiologicalProcess - predicate: preceded_by - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-subj' - aapp-PREVENTS-acab: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Polypeptide - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:PREVENTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: preventative_for_condition - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - gngm-INTERACTS_WITH-nusq: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: Gene - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:nusq - AND _exists_:object.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: NucleicAcidEntity - predicate: interacts_with - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - gngm-INTERACTS_WITH-nusq-rev: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: NucleicAcidEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: object.umls - parameters: - fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:gngm - AND _exists_:subject.umls AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Gene - predicate: interacts_with - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-subj' + bact-INTERACTS_WITH-virs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Bacterium + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:virs + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Virus + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bact-INTERACTS_WITH-virs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Virus + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:bact + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Bacterium + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + food-PREDISPOSES-fndg: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Food + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:fndg AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + food-PREDISPOSES-fndg-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND subject.semantic_type_abbreviation:food AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Food + predicate: condition_predisposed_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + phsf-PRECEDES-orgf-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: PhysiologicalProcess + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRECEDES AND subject.semantic_type_abbreviation:phsf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: preceded_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + aapp-PREVENTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Polypeptide + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-INTERACTS_WITH-nusq: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: Gene + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:nusq + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-INTERACTS_WITH-nusq-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: NucleicAcidEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:gngm + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-STIMULATES-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:carb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased strd-AUGMENTS-dsyn-rev: - supportBatch: True useTemplating: True @@ -63426,6 +68324,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + virs-LOCATION_OF-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:virs AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Virus + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' patf-PREDISPOSES-mobd: - supportBatch: True useTemplating: True @@ -63842,6 +68764,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-DISRUPTS-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-INTERACTS_WITH-lipd: - supportBatch: True useTemplating: True @@ -63883,7 +68829,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -63962,6 +68908,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm_ncbigene-PRODUCES-horm_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:gngm AND _exists_:subject.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' elii_umls-STIMULATES-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -64019,7 +68989,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -64246,6 +69216,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + gngm_ncbigene-STIMULATES-orch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:gngm AND + _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased inch-INTERACTS_WITH-bodm-rev: - supportBatch: True useTemplating: True @@ -64366,6 +69364,58 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + strd-INTERACTS_WITH-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:strd + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs_umls-INHIBITS-aapp_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:aapp AND _exists_:object.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased lbtr-COEXISTS_WITH-lbtr: - supportBatch: True useTemplating: True @@ -64543,7 +69593,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -64603,7 +69653,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -65042,6 +70092,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-DISRUPTS-ortf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:ortf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' antb-CAUSES-sosy-rev: - supportBatch: True useTemplating: True @@ -65286,6 +70360,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-STIMULATES-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:lipd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased antb-PREDISPOSES-dsyn-rev: - supportBatch: True useTemplating: True @@ -65434,6 +70536,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + aapp_ncbigene-INHIBITS-horm_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:aapp AND _exists_:subject.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased antb-AFFECTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -65534,6 +70664,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-DISRUPTS-dsyn: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:dsyn AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nsba-AFFECTS-mobd-rev: - supportBatch: True useTemplating: True @@ -66106,6 +71260,30 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-CAUSES-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-PART_OF-emst_umls: - supportBatch: True useTemplating: True @@ -66171,7 +71349,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -66183,7 +71361,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -66207,7 +71385,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -66226,6 +71404,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-TREATS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-DISRUPTS-neop-rev: - supportBatch: True useTemplating: True @@ -66322,6 +71524,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-STIMULATES-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:horm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased horm-CONVERTS_TO-horm: - supportBatch: True useTemplating: True @@ -66411,7 +71641,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -66427,7 +71657,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -66474,6 +71704,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + emst-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:emst AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' hops_umls-INTERACTS_WITH-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -66491,7 +71745,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -66563,7 +71817,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -66671,7 +71925,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -66690,30 +71944,6 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - sbst-CAUSES-comd: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:comd AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' aapp_ncbigene-COEXISTS_WITH-lipd_umls: - supportBatch: True useTemplating: True @@ -67054,6 +72284,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nsba-INHIBITS-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:nsba AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased gngm_ncbigene-INTERACTS_WITH-imft_umls: - supportBatch: True useTemplating: True @@ -67423,7 +72681,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -67526,6 +72784,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + lipd-STIMULATES-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:lipd AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased eico-ASSOCIATED_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -67798,6 +73084,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + gngm-STIMULATES-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:gngm AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased horm-AFFECTS-sosy-rev: - supportBatch: True useTemplating: True @@ -67822,6 +73136,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-PART_OF-fngs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:fngs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Fungus + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-fngs-rev: - supportBatch: True useTemplating: True @@ -67870,6 +73208,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-STIMULATES-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:hops AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased moft_umls-AFFECTS-aapp_ncbigene: - supportBatch: True useTemplating: True @@ -68042,6 +73408,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-INHIBITS-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:carb AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased hops-AFFECTS-inpo-rev: - supportBatch: True useTemplating: True @@ -68059,7 +73453,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -68138,6 +73532,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:lipd AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased inch-ASSOCIATED_WITH-sosy-rev: - supportBatch: True useTemplating: True @@ -68530,6 +73952,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:eico AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased celc-LOCATION_OF-phsu: - supportBatch: True useTemplating: True @@ -69074,6 +74524,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INTERACTS_WITH-rcpt: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:rcpt + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-INTERACTS_WITH-rcpt-rev: - supportBatch: True useTemplating: True @@ -69091,7 +74565,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -69139,7 +74613,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -69202,6 +74676,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-orgf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:orgf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased eico-STIMULATES-eico: - supportBatch: True useTemplating: True @@ -69230,6 +74732,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + eico-STIMULATES-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:eico AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased food-AFFECTS-biof: - supportBatch: True useTemplating: True @@ -69522,6 +75052,30 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + orch-COEXISTS_WITH-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:imft AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-COEXISTS_WITH-imft-rev: - supportBatch: True useTemplating: True @@ -69831,7 +75385,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -69906,6 +75460,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased gngm_ncbigene-DISRUPTS-patf_umls-rev: - supportBatch: True useTemplating: True @@ -69954,6 +75536,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INHIBITS-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:strd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased patf-MANIFESTATION_OF-orgf: - supportBatch: True useTemplating: True @@ -70134,12 +75744,40 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased - bacs-CONVERTS_TO-gngm: + gngm_ncbigene-INHIBITS-orch_umls-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:gngm AND _exists_:subject.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased + bacs-CONVERTS_TO-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -70175,7 +75813,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -70278,30 +75916,6 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-mobd: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' bact-INTERACTS_WITH-fngs: - supportBatch: True useTemplating: True @@ -70742,6 +76356,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-ASSOCIATED_WITH-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND object.semantic_type_abbreviation:comd + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' strd-ASSOCIATED_WITH-sosy-rev: - supportBatch: True useTemplating: True @@ -70790,6 +76428,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-STIMULATES-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:eico AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased neop-COMPLICATES-dsyn-rev: - supportBatch: True useTemplating: True @@ -70910,6 +76576,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CAUSES-celf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:celf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-CAUSES-celf-rev: - supportBatch: True useTemplating: True @@ -70927,7 +76617,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -70987,7 +76677,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -71210,30 +76900,6 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-neop: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:neop AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: Disease - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' rcpt-INHIBITS-gngm: - supportBatch: True useTemplating: True @@ -71338,6 +77004,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' celc-LOCATION_OF-nsba: - supportBatch: True useTemplating: True @@ -71750,6 +77440,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + imft-COEXISTS_WITH-phsu-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:imft + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' eico-AFFECTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -71822,6 +77536,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + antb-INHIBITS-antb-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:antb AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased bact-LOCATION_OF-antb: - supportBatch: True useTemplating: True @@ -72430,6 +78172,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-CONVERTS_TO-elii: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:elii AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' elii_umls-INTERACTS_WITH-aapp_ncbigene-rev: - supportBatch: True useTemplating: True @@ -72574,6 +78340,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + carb-CONVERTS_TO-carb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:carb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-CONVERTS_TO-carb-rev: - supportBatch: True useTemplating: True @@ -72743,7 +78533,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -73270,12 +79060,36 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-AFFECTS-emst: + rcpt-INTERACTS_WITH-orch-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:rcpt + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-emst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -73802,6 +79616,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-bpoc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:bpoc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-bpoc-rev: - supportBatch: True useTemplating: True @@ -73819,7 +79661,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -73830,6 +79672,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + carb-INTERACTS_WITH-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:imft + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-INTERACTS_WITH-imft-rev: - supportBatch: True useTemplating: True @@ -74214,6 +80080,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + lipd-PART_OF-emst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:emst AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' tisu-LOCATION_OF-antb: - supportBatch: True useTemplating: True @@ -74238,6 +80128,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-PREVENTS-neop: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:neop AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' patf-MANIFESTATION_OF-celf: - supportBatch: True useTemplating: True @@ -74382,6 +80296,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + carb-INHIBITS-carb-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:carb AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased comd-OCCURS_IN-neop: - supportBatch: True useTemplating: True @@ -74495,7 +80437,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -74507,7 +80449,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -74526,6 +80468,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:horm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' anst-LOCATION_OF-orch-rev: - supportBatch: True useTemplating: True @@ -74574,6 +80540,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-antb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:antb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-PREDISPOSES-patf-rev: - supportBatch: True useTemplating: True @@ -74591,7 +80581,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -74694,12 +80684,60 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-STIMULATES-imft: + celc-PRODUCES-orch-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:celc AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-nsba: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:nsba AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-STIMULATES-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -74739,7 +80777,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -75027,7 +81065,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -75194,6 +81232,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:hops AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased cgab-LOCATION_OF-virs: - supportBatch: True useTemplating: True @@ -75798,6 +81864,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' strd-AFFECTS-patf-rev: - supportBatch: True useTemplating: True @@ -75822,6 +81912,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-AFFECTS-emst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:emst AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' phsu-COEXISTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -76050,12 +82164,36 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - bacs-COEXISTS_WITH-eico: + imft-INTERACTS_WITH-carb-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:imft + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -76335,7 +82473,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -76386,6 +82524,58 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + gngm-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:gngm AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased + bacs-DISRUPTS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' anst-PART_OF-neop: - supportBatch: True useTemplating: True @@ -76439,7 +82629,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -76647,7 +82837,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -77042,6 +83232,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + tisu-PRODUCES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:tisu AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nusq-PART_OF-emst: - supportBatch: True useTemplating: True @@ -77287,7 +83501,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -77323,7 +83537,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -77395,7 +83609,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -77467,7 +83681,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -77483,7 +83697,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -77506,6 +83720,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + celf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:celf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-PART_OF-neop_umls-rev: - supportBatch: True useTemplating: True @@ -77850,6 +84088,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased aapp_ncbigene-PREDISPOSES-mobd_umls: - supportBatch: True useTemplating: True @@ -77987,7 +84253,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -78015,7 +84281,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -78643,7 +84909,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -78835,7 +85101,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -78871,7 +85137,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -78902,6 +85168,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-phsf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:phsf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased patf-PRODUCES-bdsu: - supportBatch: True useTemplating: True @@ -79079,7 +85373,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -79126,6 +85420,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-DISRUPTS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-DISRUPTS-sosy-rev: - supportBatch: True useTemplating: True @@ -79143,7 +85461,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -79387,7 +85705,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -79442,6 +85760,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + strd-COEXISTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:strd + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' opco-DISRUPTS-orgf-rev: - supportBatch: True useTemplating: True @@ -79738,6 +86080,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + patf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:patf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-AFFECTS-sosy_umls-rev: - supportBatch: True useTemplating: True @@ -79907,7 +86273,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -80055,7 +86421,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -80134,6 +86500,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:horm AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased strd_umls-STIMULATES-gngm_ncbigene-rev: - supportBatch: True useTemplating: True @@ -80406,6 +86800,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + eico-CONVERTS_TO-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:eico AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-PRODUCES-strd: - supportBatch: True useTemplating: True @@ -80567,7 +86985,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -80778,6 +87196,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + aapp_ncbigene-PRODUCES-bacs_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:aapp AND _exists_:subject.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' imft-ASSOCIATED_WITH-inpo: - supportBatch: True useTemplating: True @@ -81170,6 +87612,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-COEXISTS_WITH-nusq: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:nusq AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-COEXISTS_WITH-nusq-rev: - supportBatch: True useTemplating: True @@ -81235,7 +87701,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -81271,7 +87737,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -81283,7 +87749,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: close_match source: "infores:semmeddb" knowledge_level: not_provided @@ -81295,7 +87761,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -81307,7 +87773,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: close_match source: "infores:semmeddb" knowledge_level: not_provided @@ -81751,7 +88217,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -82167,7 +88633,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -82179,7 +88645,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -82354,6 +88820,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-PREDISPOSES-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:mobd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-TREATS-virs-rev: - supportBatch: True useTemplating: True @@ -82471,13 +88961,37 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_input source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + topp-USES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:USES AND subject.semantic_type_abbreviation:topp AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Procedure + predicate: is_input_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' sosy-COEXISTS_WITH-comd: - supportBatch: True useTemplating: True @@ -82750,6 +89264,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-STIMULATES-antb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:antb AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased rcpt-INTERACTS_WITH-horm: - supportBatch: True useTemplating: True @@ -82774,6 +89316,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INHIBITS-antb: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:antb AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased carb-AFFECTS-celc-rev: - supportBatch: True useTemplating: True @@ -82906,6 +89476,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + elii-AUGMENTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased elii-AUGMENTS-acab-rev: - supportBatch: True useTemplating: True @@ -82934,6 +89532,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + orch-COEXISTS_WITH-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:strd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' imft-PREDISPOSES-neop: - supportBatch: True useTemplating: True @@ -83099,7 +89721,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -83435,7 +90057,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -83495,7 +90117,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -83719,7 +90341,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -83755,7 +90377,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -83903,7 +90525,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -84082,6 +90704,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + antb-STIMULATES-antb-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:antb AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased anab-LOCATION_OF-bact: - supportBatch: True useTemplating: True @@ -84291,7 +90941,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -84411,7 +91061,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -84423,7 +91073,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -84514,6 +91164,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-STIMULATES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:carb AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased aapp_ncbigene-STIMULATES-carb_umls: - supportBatch: True useTemplating: True @@ -84619,7 +91297,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -84655,7 +91333,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -84827,7 +91505,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -85234,6 +91912,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + lipd-CONVERTS_TO-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:lipd AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' dsyn-AFFECTS-virs-rev: - supportBatch: True useTemplating: True @@ -85306,6 +92008,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-STIMULATES-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:imft AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased orch-STIMULATES-imft-rev: - supportBatch: True useTemplating: True @@ -85599,7 +92329,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -85695,7 +92425,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -85786,6 +92516,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-AUGMENTS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-sosy-rev: - supportBatch: True useTemplating: True @@ -85803,7 +92561,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -85958,6 +92716,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:cell AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-cell-rev: - supportBatch: True useTemplating: True @@ -85975,7 +92761,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -86111,7 +92897,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -86147,7 +92933,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -86283,7 +93069,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -86331,7 +93117,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -86503,7 +93289,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -86527,7 +93313,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -86539,13 +93325,61 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + hops-CONVERTS_TO-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:hops AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + eico-COEXISTS_WITH-lipd-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:eico + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' lbtr-PREDISPOSES-neop: - supportBatch: True useTemplating: True @@ -86695,7 +93529,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -86735,7 +93569,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -87138,6 +93972,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + inch-CONVERTS_TO-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:inch AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + ortf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:ortf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' cgab-MANIFESTATION_OF-dsyn-rev: - supportBatch: True useTemplating: True @@ -87387,7 +94269,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -87626,6 +94508,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + bacs-CONVERTS_TO-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:eico AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' patf-PRODUCES-enzy: - supportBatch: True useTemplating: True @@ -87703,7 +94609,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -87743,7 +94649,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -87998,6 +94904,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-CONVERTS_TO-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:elii AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' carb-INTERACTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -88046,6 +94976,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + eico-INHIBITS-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:eico AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased carb-TREATS-patf-rev: - supportBatch: True useTemplating: True @@ -88510,6 +95468,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:imft AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-imft-rev: - supportBatch: True useTemplating: True @@ -88527,7 +95513,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -88639,7 +95625,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -89795,7 +96781,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -89950,6 +96936,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-tisu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:tisu AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased anst-LOCATION_OF-virs: - supportBatch: True useTemplating: True @@ -90142,6 +97156,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-DISRUPTS-tisu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:tisu AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: GrossAnatomicalStructure + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-COEXISTS_WITH-gngm-rev: - supportBatch: True useTemplating: True @@ -90166,6 +97204,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AUGMENTS-fndg: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:fndg AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-fndg-rev: - supportBatch: True useTemplating: True @@ -90183,7 +97249,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -90218,12 +97284,12 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - eico-INHIBITS-aapp-rev: + opco-INTERACTS_WITH-orch-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: Polypeptide + semantic: SmallMolecule requestBody: body: q: '{{ queryInputs }}' @@ -90231,45 +97297,45 @@ components: parameters: fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:eico AND _exists_:subject.umls - AND pmid_count:>3 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:opco + AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS semantic: SmallMolecule - predicate: affected_by + predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - qualifiers: - qualified_predicate: caused_by - subject_aspect_qualifier: activity_or_abundance - subject_direction_qualifier: decreased - sbst-CAUSES-acab: + eico-INHIBITS-aapp-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: ChemicalEntity + semantic: Polypeptide requestBody: body: q: '{{ queryInputs }}' - scopes: subject.umls + scopes: object.umls parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:eico AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: Disease - predicate: causes + semantic: SmallMolecule + predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased nnon-INHIBITS-gngm-rev: - supportBatch: True useTemplating: True @@ -90322,6 +97388,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + eico-COEXISTS_WITH-eico: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:eico AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' orch-STIMULATES-nusq: - supportBatch: True useTemplating: True @@ -90450,6 +97540,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + phsf-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:phsf AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' bact-LOCATION_OF-opco: - supportBatch: True useTemplating: True @@ -90674,6 +97788,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + lipd-PART_OF-anst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:anst AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: AnatomicalEntity + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' lipd-PART_OF-anst-rev: - supportBatch: True useTemplating: True @@ -90894,6 +98032,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + imft-STIMULATES-eico-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:imft AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased bodm-INTERACTS_WITH-phsu: - supportBatch: True useTemplating: True @@ -91207,7 +98373,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -91303,7 +98469,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -91331,7 +98497,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: caused_by source: "infores:semmeddb" knowledge_level: not_provided @@ -91903,7 +99069,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -92082,6 +99248,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + phsu-CONVERTS_TO-gngm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:gngm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' phsu-CONVERTS_TO-gngm-rev: - supportBatch: True useTemplating: True @@ -92106,6 +99296,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-TREATS-patf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:patf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-TREATS-patf-rev: - supportBatch: True useTemplating: True @@ -92123,7 +99337,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: subject_of_treatment_application_or_study_for_treatment_by source: "infores:semmeddb" knowledge_level: not_provided @@ -92442,6 +99656,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + inch-COEXISTS_WITH-rcpt: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:rcpt AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-COEXISTS_WITH-rcpt-rev: - supportBatch: True useTemplating: True @@ -92786,6 +100024,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + nusq-COEXISTS_WITH-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:nusq + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm-CONVERTS_TO-gngm: - supportBatch: True useTemplating: True @@ -92887,7 +100149,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -92923,7 +100185,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -92935,7 +100197,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -93230,12 +100492,36 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-CAUSES-anab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:anab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PRODUCES-bacs: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -93247,7 +100533,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -93259,7 +100545,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -93271,7 +100557,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produced_by source: "infores:semmeddb" knowledge_level: not_provided @@ -93374,6 +100660,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-fndg: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:fndg AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-AFFECTS-fndg-rev: - supportBatch: True useTemplating: True @@ -93391,7 +100701,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -93878,6 +101188,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + strd-INHIBITS-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:strd AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased phsu_ncbigene-STIMULATES-gngm_umls-rev: - supportBatch: True useTemplating: True @@ -94351,7 +101689,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_input source: "infores:semmeddb" knowledge_level: not_provided @@ -94514,6 +101852,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + carb-CONVERTS_TO-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:carb AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' irda-INTERACTS_WITH-rcpt: - supportBatch: True useTemplating: True @@ -95198,6 +102560,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-DISRUPTS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:DISRUPTS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: disrupts + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' strd-AFFECTS-sosy-rev: - supportBatch: True useTemplating: True @@ -95239,7 +102625,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -95274,6 +102660,34 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-STIMULATES-nusq: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:nusq AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-STIMULATES-nusq-rev: - supportBatch: True useTemplating: True @@ -95291,7 +102705,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -95302,6 +102716,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + nnon-COEXISTS_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:nnon + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp_ncbigene-DISRUPTS-sosy_umls: - supportBatch: True useTemplating: True @@ -95398,12 +102836,36 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - bacs-CONVERTS_TO-imft: + opco-COEXISTS_WITH-bacs-rev: - supportBatch: True useTemplating: True inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:opco + AND _exists_:subject.umls AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CONVERTS_TO-imft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -95439,13 +102901,37 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-CONVERTS_TO-inch: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:inch AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-PRODUCES-eico_umls: - supportBatch: True useTemplating: True @@ -95699,7 +103185,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -95739,7 +103225,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -95767,7 +103253,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -95783,7 +103269,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -95819,7 +103305,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -95831,7 +103317,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -95867,7 +103353,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -96067,7 +103553,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -96287,7 +103773,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -96299,7 +103785,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -96411,7 +103897,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -96531,7 +104017,7 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -96610,6 +104096,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + strd-STIMULATES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND subject.semantic_type_abbreviation:strd AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: increased imft-ASSOCIATED_WITH-sosy: - supportBatch: True useTemplating: True @@ -96999,7 +104513,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -97270,6 +104784,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-PREDISPOSES-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREDISPOSES AND object.semantic_type_abbreviation:sosy AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: predisposes_to_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PREDISPOSES-sosy-rev: - supportBatch: True useTemplating: True @@ -97287,7 +104825,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -97898,6 +105436,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + phsu-STIMULATES-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:strd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs_ncbigene-INTERACTS_WITH-aapp_umls-rev: - supportBatch: True useTemplating: True @@ -97950,6 +105516,54 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: increased + bacs-CONVERTS_TO-horm: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:horm AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-TREATS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' comd-PRECEDES-comd-rev: - supportBatch: True useTemplating: True @@ -98047,7 +105661,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -98158,6 +105772,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + opco-INTERACTS_WITH-opco: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:opco + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm-AUGMENTS-mobd: - supportBatch: True useTemplating: True @@ -98382,6 +106020,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + enzy-INTERACTS_WITH-nnon-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:enzy + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' gngm_ncbigene-AFFECTS-biof_umls-rev: - supportBatch: True useTemplating: True @@ -98523,13 +106185,37 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-CONVERTS_TO-hops: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:hops AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm-AUGMENTS-sosy-rev: - supportBatch: True useTemplating: True @@ -98795,7 +106481,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -98819,7 +106505,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -98835,7 +106521,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -99030,6 +106716,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + bacs-CONVERTS_TO-phsu: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:phsu AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' irda-INTERACTS_WITH-gngm: - supportBatch: True useTemplating: True @@ -99390,6 +107100,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + elii-STIMULATES-enzy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:enzy AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased elii-STIMULATES-enzy-rev: - supportBatch: True useTemplating: True @@ -100587,7 +108325,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -100623,7 +108361,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produced_by source: "infores:semmeddb" knowledge_level: not_provided @@ -101050,6 +108788,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-STIMULATES-moft: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:moft AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: MolecularActivity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-STIMULATES-moft-rev: - supportBatch: True useTemplating: True @@ -101067,7 +108833,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -101330,6 +109096,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + bacs-AUGMENTS-celc: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:celc AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: CellularComponent + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-celc-rev: - supportBatch: True useTemplating: True @@ -101347,7 +109141,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -102107,7 +109901,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -102167,13 +109961,37 @@ components: AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + phsf-ASSOCIATED_WITH-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ASSOCIATED_WITH AND subject.semantic_type_abbreviation:phsf + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' phsu-COEXISTS_WITH-nnon: - supportBatch: True useTemplating: True @@ -102403,7 +110221,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -102439,7 +110257,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_into source: "infores:semmeddb" knowledge_level: not_provided @@ -102451,7 +110269,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -103287,7 +111105,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -103323,7 +111141,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: has_part source: "infores:semmeddb" knowledge_level: not_provided @@ -103814,6 +111632,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: decreased + bacs-PREVENTS-comd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:comd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' elii-DISRUPTS-biof-rev: - supportBatch: True useTemplating: True @@ -103927,13 +111769,37 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + irda-COEXISTS_WITH-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:irda + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiagnosticAid + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' patf-COMPLICATES-neop: - supportBatch: True useTemplating: True @@ -104487,7 +112353,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -104527,7 +112393,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -104686,6 +112552,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + imft-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:imft AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased nsba-TREATS-patf-rev: - supportBatch: True useTemplating: True @@ -104830,6 +112724,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + nnon-PART_OF-virs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:virs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Virus + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nnon-PART_OF-virs-rev: - supportBatch: True useTemplating: True @@ -104854,6 +112772,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + carb-PART_OF-aapp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:aapp AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Polypeptide + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' carb-PART_OF-aapp-rev: - supportBatch: True useTemplating: True @@ -104926,6 +112868,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-TREATS-inpo: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:inpo AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PathologicalProcess + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' rcpt-INTERACTS_WITH-strd: - supportBatch: True useTemplating: True @@ -105050,6 +113016,54 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + bacs-CAUSES-phsf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CAUSES AND object.semantic_type_abbreviation:phsf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: causes + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-AFFECTS-cgab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:cgab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' gngm_ncbigene-INTERACTS_WITH-enzy_umls: - supportBatch: True useTemplating: True @@ -105191,7 +113205,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_predisposed_by source: "infores:semmeddb" knowledge_level: not_provided @@ -106027,7 +114041,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -106422,6 +114436,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + hops-PREVENTS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' horm-AUGMENTS-anab: - supportBatch: True useTemplating: True @@ -106467,7 +114505,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -106494,12 +114532,60 @@ components: filter: predicate:same_as AND object.semantic_type_abbreviation:hops AND _exists_:object.umls AND pmid_count:>3 outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: close_match + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + orch-same_as-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:same_as AND subject.semantic_type_abbreviation:orch AND _exists_:subject.umls + AND pmid_count:>3 + outputs: - id: UMLS semantic: SmallMolecule predicate: close_match source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + elii-INTERACTS_WITH-enzy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:enzy + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: interacts_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' irda_umls-INHIBITS-gngm_ncbigene: @@ -106798,6 +114884,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-ADMINISTERED_TO-aggp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:ADMINISTERED_TO AND object.semantic_type_abbreviation:aggp + AND _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cohort + predicate: related_to + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' hops-ADMINISTERED_TO-aggp-rev: - supportBatch: True useTemplating: True @@ -106815,7 +114925,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided @@ -106855,7 +114965,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -106874,6 +114984,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-COEXISTS_WITH-nnon: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:nnon AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-INTERACTS_WITH-imft-rev: - supportBatch: True useTemplating: True @@ -107090,30 +115224,6 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-anab: - - supportBatch: True - useTemplating: True - inputs: - - id: UMLS - semantic: ChemicalEntity - requestBody: - body: - q: '{{ queryInputs }}' - scopes: subject.umls - parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name - size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:anab AND _exists_:object.umls - AND pmid_count:>3 - outputs: - - id: UMLS - semantic: PhenotypicFeature - predicate: causes - source: "infores:semmeddb" - knowledge_level: not_provided - agent_type: text_mining_agent - response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' sbst-CAUSES-anab-rev: - supportBatch: True useTemplating: True @@ -107591,7 +115701,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -107607,7 +115717,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -107727,13 +115837,37 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: related_to source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-AFFECTS-anab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:anab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' imft-INTERACTS_WITH-antb: - supportBatch: True useTemplating: True @@ -108962,6 +117096,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-fndg: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:fndg AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: DiseaseOrPhenotypicFeature + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-fndg-rev: - supportBatch: True useTemplating: True @@ -108979,7 +117141,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -109062,6 +117224,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + rcpt-COEXISTS_WITH-elii-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:rcpt + AND _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nsba-DISRUPTS-mobd-rev: - supportBatch: True useTemplating: True @@ -109167,7 +117353,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -109346,6 +117532,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + inch-AFFECTS-anst: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:anst AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: AnatomicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-AFFECTS-anst-rev: - supportBatch: True useTemplating: True @@ -109706,6 +117916,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-AFFECTS-emod: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AFFECTS AND object.semantic_type_abbreviation:emod AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: BiologicalEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-AFFECTS-emod-rev: - supportBatch: True useTemplating: True @@ -109723,7 +117957,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -109927,7 +118161,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -109939,13 +118173,37 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: part_of source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-PART_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND subject.semantic_type_abbreviation:bacs AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: has_part + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' imft-INHIBITS-lipd: - supportBatch: True useTemplating: True @@ -110022,6 +118280,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-INHIBITS-ortf: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:ortf AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhysiologicalProcess + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-ortf-rev: - supportBatch: True useTemplating: True @@ -110039,7 +118325,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -110095,7 +118381,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -110126,6 +118412,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-subj' + bacs-TREATS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-TREATS-sosy-rev: - supportBatch: True useTemplating: True @@ -110143,7 +118453,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: subject_of_treatment_application_or_study_for_treatment_by source: "infores:semmeddb" knowledge_level: not_provided @@ -110215,7 +118525,7 @@ components: _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -110287,7 +118597,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided @@ -110627,7 +118937,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -110702,6 +119012,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + lipd-CONVERTS_TO-lipd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:lipd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bact-PRODUCES-orch: - supportBatch: True useTemplating: True @@ -110726,6 +119060,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bact-PRODUCES-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:bact AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Bacterium + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' aapp-PRODUCES-phsu: - supportBatch: True useTemplating: True @@ -111126,6 +119484,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-TREATS-mobd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:TREATS AND object.semantic_type_abbreviation:mobd AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: treats_or_applied_or_studied_to_treat + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' nusq-AUGMENTS-orgf: - supportBatch: True useTemplating: True @@ -111274,6 +119656,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + aapp_ncbigene-CONVERTS_TO-orch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:aapp AND + _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' opco-INHIBITS-aapp-rev: - supportBatch: True useTemplating: True @@ -111611,7 +120017,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -111627,7 +120033,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -111703,7 +120109,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -111791,7 +120197,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -111803,7 +120209,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -111946,6 +120352,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + strd-PART_OF-aggp: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PART_OF AND object.semantic_type_abbreviation:aggp AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cohort + predicate: part_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' strd-PART_OF-aggp-rev: - supportBatch: True useTemplating: True @@ -111970,6 +120400,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + hops-PREVENTS-acab: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:acab AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' cell_umls-LOCATION_OF-bacs_ncbigene: - supportBatch: True useTemplating: True @@ -112410,6 +120864,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + rcpt-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:rcpt AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased dsyn-COEXISTS_WITH-moft: - supportBatch: True useTemplating: True @@ -112458,6 +120940,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + anst-LOCATION_OF-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:LOCATION_OF AND subject.semantic_type_abbreviation:anst AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: AnatomicalEntity + predicate: located_in + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' ortf-PRODUCES-aapp-rev: - supportBatch: True useTemplating: True @@ -112946,6 +121452,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + orch-INHIBITS-nusq: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:nusq AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased orch-INHIBITS-nusq-rev: - supportBatch: True useTemplating: True @@ -113502,12 +122036,12 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' - sbst-CAUSES-cgab: + fngs-INTERACTS_WITH-virs: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: ChemicalEntity + semantic: Fungus requestBody: body: q: '{{ queryInputs }}' @@ -113515,47 +122049,47 @@ components: parameters: fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:CAUSES AND object.semantic_type_abbreviation:cgab AND _exists_:object.umls - AND pmid_count:>3 + filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:virs + AND _exists_:object.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: Disease - predicate: causes + semantic: Virus + predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - fngs-INTERACTS_WITH-virs: + fngs-INTERACTS_WITH-virs-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: Fungus + semantic: Virus requestBody: body: q: '{{ queryInputs }}' - scopes: subject.umls + scopes: object.umls parameters: - fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:INTERACTS_WITH AND object.semantic_type_abbreviation:virs - AND _exists_:object.umls AND pmid_count:>3 + filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:fngs + AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: Virus + semantic: Fungus predicate: interacts_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: - $ref: '#/components/x-bte-response-mapping/umls-obj' - fngs-INTERACTS_WITH-virs-rev: + $ref: '#/components/x-bte-response-mapping/umls-subj' + enzy-COEXISTS_WITH-elii-rev: - supportBatch: True useTemplating: True inputs: - id: UMLS - semantic: Virus + semantic: SmallMolecule requestBody: body: q: '{{ queryInputs }}' @@ -113563,12 +122097,12 @@ components: parameters: fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name size: 1000 - filter: predicate:INTERACTS_WITH AND subject.semantic_type_abbreviation:fngs + filter: predicate:COEXISTS_WITH AND subject.semantic_type_abbreviation:enzy AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: Fungus - predicate: interacts_with + semantic: Protein + predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent @@ -114494,6 +123028,30 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + bacs-PREVENTS-sosy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PREVENTS AND object.semantic_type_abbreviation:sosy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: PhenotypicFeature + predicate: preventative_for_condition + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' bacs-PREVENTS-sosy-rev: - supportBatch: True useTemplating: True @@ -114511,7 +123069,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: condition_prevented_by source: "infores:semmeddb" knowledge_level: not_provided @@ -115079,7 +123637,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -115587,7 +124145,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -115883,7 +124441,7 @@ components: AND _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: coexists_with source: "infores:semmeddb" knowledge_level: not_provided @@ -115931,7 +124489,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: disrupted_by source: "infores:semmeddb" knowledge_level: not_provided @@ -116130,6 +124688,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + nsba-CONVERTS_TO-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:nsba AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' mobd-PRODUCES-tisu-rev: - supportBatch: True useTemplating: True @@ -116171,13 +124753,37 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: precedes source: "infores:semmeddb" knowledge_level: not_provided agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + topp-PRECEDES-hops-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRECEDES AND subject.semantic_type_abbreviation:topp AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Procedure + predicate: preceded_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' topp-PRECEDES-antb: - supportBatch: True useTemplating: True @@ -116226,6 +124832,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + phsu-STIMULATES-cell: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:cell AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Cell + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased phsu-STIMULATES-cell-rev: - supportBatch: True useTemplating: True @@ -116543,7 +125177,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: produces source: "infores:semmeddb" knowledge_level: not_provided @@ -116667,7 +125301,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -116754,6 +125388,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + diap-USES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:USES AND subject.semantic_type_abbreviation:diap AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Procedure + predicate: is_input_of + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' lbtr-MANIFESTATION_OF-inpo: - supportBatch: True useTemplating: True @@ -117423,7 +126081,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -117459,7 +126117,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -117538,6 +126196,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + bacs-STIMULATES-rcpt: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:STIMULATES AND object.semantic_type_abbreviation:rcpt AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased lipd-CAUSES-celf-rev: - supportBatch: True useTemplating: True @@ -117579,7 +126265,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affects source: "infores:semmeddb" knowledge_level: not_provided @@ -117687,7 +126373,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -117798,6 +126484,34 @@ components: qualified_predicate: causes object_aspect_qualifier: activity_or_abundance object_direction_qualifier: decreased + nusq-INHIBITS-inch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:nusq AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: NucleicAcidEntity + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased nnon-PART_OF-bact-rev: - supportBatch: True useTemplating: True @@ -117975,7 +126689,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -118070,6 +126784,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + biof-PRODUCES-horm-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:biof AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Phenomenon + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' enzy-ASSOCIATED_WITH-patf-rev: - supportBatch: True useTemplating: True @@ -118199,7 +126937,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -118290,6 +127028,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + mobd-PRODUCES-nsba-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND subject.semantic_type_abbreviation:mobd AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Disease + predicate: produced_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' neop-CAUSES-patf-rev: - supportBatch: True useTemplating: True @@ -118922,6 +127684,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs_umls-INHIBITS-bacs_ncbigene: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:bacs AND _exists_:object.ncbigene + AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bpoc-LOCATION_OF-rcpt: - supportBatch: True useTemplating: True @@ -118946,6 +127736,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-INHIBITS-enzy: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND object.semantic_type_abbreviation:enzy AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Protein + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: decreased bacs-INHIBITS-enzy-rev: - supportBatch: True useTemplating: True @@ -118963,7 +127781,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -119031,7 +127849,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -119067,7 +127885,7 @@ components: _exists_:subject.umls AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: derives_from source: "infores:semmeddb" knowledge_level: not_provided @@ -119223,7 +128041,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -119371,7 +128189,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -119431,7 +128249,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -119519,7 +128337,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -119655,7 +128473,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: precedes source: "infores:semmeddb" knowledge_level: not_provided @@ -119854,6 +128672,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm-CONVERTS_TO-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:gngm AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Gene + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nusq-CONVERTS_TO-nusq: - supportBatch: True useTemplating: True @@ -119950,12 +128792,36 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' - phsu-PRODUCES-bacs-rev: + phsu-PRODUCES-bacs: - supportBatch: True useTemplating: True inputs: - id: UMLS semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:PRODUCES AND object.semantic_type_abbreviation:bacs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: produces + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + phsu-PRODUCES-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -120142,6 +129008,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + gngm_ncbigene-CONVERTS_TO-inch_umls-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.ncbigene,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:gngm AND + _exists_:subject.ncbigene AND pmid_count:>3 + outputs: + - id: NCBIGene + semantic: Gene + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/ncbigene-subj' rcpt-ASSOCIATED_WITH-sosy: - supportBatch: True useTemplating: True @@ -120219,7 +129109,7 @@ components: useTemplating: True inputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity requestBody: body: q: '{{ queryInputs }}' @@ -120374,6 +129264,54 @@ components: qualified_predicate: caused_by subject_aspect_qualifier: activity_or_abundance subject_direction_qualifier: increased + carb-same_as-bacs: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:same_as AND object.semantic_type_abbreviation:bacs AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: ChemicalEntity + predicate: close_match + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + carb-same_as-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:same_as AND subject.semantic_type_abbreviation:carb AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: close_match + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' horm-COEXISTS_WITH-rcpt-rev: - supportBatch: True useTemplating: True @@ -120626,6 +129564,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/ncbigene-obj' + bacs-AUGMENTS-biof: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:AUGMENTS AND object.semantic_type_abbreviation:biof AND _exists_:object.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: Phenomenon + predicate: affects + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' + qualifiers: + qualified_predicate: causes + object_aspect_qualifier: activity_or_abundance + object_direction_qualifier: increased bacs-AUGMENTS-biof-rev: - supportBatch: True useTemplating: True @@ -120643,7 +129609,7 @@ components: AND pmid_count:>3 outputs: - id: UMLS - semantic: SmallMolecule + semantic: ChemicalEntity predicate: affected_by source: "infores:semmeddb" knowledge_level: not_provided @@ -120750,6 +129716,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + bacs-COEXISTS_WITH-opco: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:COEXISTS_WITH AND object.semantic_type_abbreviation:opco AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: coexists_with + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' inch-TREATS-patf-rev: - supportBatch: True useTemplating: True @@ -121282,6 +130272,34 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + opco-INHIBITS-orch-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:INHIBITS AND subject.semantic_type_abbreviation:opco AND _exists_:subject.umls + AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: affected_by + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' + qualifiers: + qualified_predicate: caused_by + subject_aspect_qualifier: activity_or_abundance + subject_direction_qualifier: decreased fngs-LOCATION_OF-eico: - supportBatch: True useTemplating: True @@ -121682,6 +130700,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-subj' + horm-CONVERTS_TO-strd: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: SmallMolecule + requestBody: + body: + q: '{{ queryInputs }}' + scopes: subject.umls + parameters: + fields: object.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND object.semantic_type_abbreviation:strd AND + _exists_:object.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_into + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-obj' topp-COMPLICATES-orgf: - supportBatch: True useTemplating: True @@ -122406,6 +131448,30 @@ components: agent_type: text_mining_agent response_mapping: $ref: '#/components/x-bte-response-mapping/umls-obj' + horm-CONVERTS_TO-bacs-rev: + - supportBatch: True + useTemplating: True + inputs: + - id: UMLS + semantic: ChemicalEntity + requestBody: + body: + q: '{{ queryInputs }}' + scopes: object.umls + parameters: + fields: subject.umls,predication.pmid,predication.sentence,subject.name,object.name + size: 1000 + filter: predicate:CONVERTS_TO AND subject.semantic_type_abbreviation:horm AND + _exists_:subject.umls AND pmid_count:>3 + outputs: + - id: UMLS + semantic: SmallMolecule + predicate: derives_from + source: "infores:semmeddb" + knowledge_level: not_provided + agent_type: text_mining_agent + response_mapping: + $ref: '#/components/x-bte-response-mapping/umls-subj' nsba-DISRUPTS-celc-rev: - supportBatch: True useTemplating: True diff --git a/semmeddb/version_without_operations.yaml b/semmeddb/version_without_operations.yaml index 1c017e37..a5b8bfc8 100644 --- a/semmeddb/version_without_operations.yaml +++ b/semmeddb/version_without_operations.yaml @@ -19,7 +19,7 @@ info: component: KP team: - Service Provider - biolink-version: "4.1.6" + biolink-version: "4.2.1" servers: - description: Production server url: https://biothings.ncats.io/semmeddb