From c532517fc5ae3e01b767d3fe45176df8dea505d2 Mon Sep 17 00:00:00 2001 From: Alessandro Candido Date: Sat, 4 Nov 2023 11:26:40 +0100 Subject: [PATCH 1/7] Add nix files --- .envrc | 9 ++ .gitignore | 1 + flake.lock | 337 +++++++++++++++++++++++++++++++++++++++++++++++++++++ flake.nix | 57 +++++++++ 4 files changed, 404 insertions(+) create mode 100644 .envrc create mode 100644 flake.lock create mode 100644 flake.nix diff --git a/.envrc b/.envrc new file mode 100644 index 000000000..01f5f41d0 --- /dev/null +++ b/.envrc @@ -0,0 +1,9 @@ +if ! has nix_direnv_version || ! nix_direnv_version 2.2.1; then + source_url "https://raw.githubusercontent.com/nix-community/nix-direnv/2.2.1/direnvrc" "sha256-zelF0vLbEl5uaqrfIzbgNzJWGmLzCmYAkInj/LNxvKs=" +fi + +nix_direnv_watch_file flake.nix +nix_direnv_watch_file flake.lock +if ! use flake . --impure; then + echo "devenv could not be built. The devenv environment was not loaded. Make the necessary changes to devenv.nix and hit enter to try again." >&2 +fi diff --git a/.gitignore b/.gitignore index 0445c0eaf..4fe810a31 100644 --- a/.gitignore +++ b/.gitignore @@ -163,3 +163,4 @@ validation-report.json # Folders to ignore node_modules +.devenv diff --git a/flake.lock b/flake.lock new file mode 100644 index 000000000..d6ec877c1 --- /dev/null +++ b/flake.lock @@ -0,0 +1,337 @@ +{ + "nodes": { + "devenv": { + "inputs": { + "flake-compat": "flake-compat", + "nix": "nix", + "nixpkgs": "nixpkgs", + "pre-commit-hooks": "pre-commit-hooks" + }, + "locked": { + "lastModified": 1698243190, + "narHash": "sha256-n+SbyNQRhUcaZoU00d+7wi17HJpw/kAUrXOL4zRcqE8=", + "owner": "cachix", + "repo": "devenv", + "rev": "86f476f7edb86159fd20764489ab4e4df6edb4b6", + "type": "github" + }, + "original": { + "owner": "cachix", + "repo": "devenv", + "type": "github" + } + }, + "flake-compat": { + "flake": false, + "locked": { + "lastModified": 1673956053, + "narHash": "sha256-4gtG9iQuiKITOjNQQeQIpoIB6b16fm+504Ch3sNKLd8=", + "owner": "edolstra", + "repo": "flake-compat", + "rev": "35bb57c0c8d8b62bbfd284272c928ceb64ddbde9", + "type": "github" + }, + "original": { + "owner": "edolstra", + "repo": "flake-compat", + "type": "github" + } + }, + "flake-compat_2": { + "flake": false, + "locked": { + "lastModified": 1673956053, + "narHash": "sha256-4gtG9iQuiKITOjNQQeQIpoIB6b16fm+504Ch3sNKLd8=", + "owner": "edolstra", + "repo": "flake-compat", + "rev": "35bb57c0c8d8b62bbfd284272c928ceb64ddbde9", + "type": "github" + }, + "original": { + "owner": "edolstra", + "repo": "flake-compat", + "type": "github" + } + }, + "flake-utils": { + "inputs": { + "systems": "systems" + }, + "locked": { + "lastModified": 1685518550, + "narHash": "sha256-o2d0KcvaXzTrPRIo0kOLV0/QXHhDQ5DTi+OxcjO8xqY=", + "owner": "numtide", + "repo": "flake-utils", + "rev": "a1720a10a6cfe8234c0e93907ffe81be440f4cef", + "type": "github" + }, + "original": { + "owner": "numtide", + "repo": "flake-utils", + "type": "github" + } + }, + "flake-utils_2": { + "inputs": { + "systems": "systems_2" + }, + "locked": { + "lastModified": 1685518550, + "narHash": "sha256-o2d0KcvaXzTrPRIo0kOLV0/QXHhDQ5DTi+OxcjO8xqY=", + "owner": "numtide", + "repo": "flake-utils", + "rev": "a1720a10a6cfe8234c0e93907ffe81be440f4cef", + "type": "github" + }, + "original": { + "id": "flake-utils", + "type": "indirect" + } + }, + "gitignore": { + "inputs": { + "nixpkgs": [ + "devenv", + "pre-commit-hooks", + "nixpkgs" + ] + }, + "locked": { + "lastModified": 1660459072, + "narHash": "sha256-8DFJjXG8zqoONA1vXtgeKXy68KdJL5UaXR8NtVMUbx8=", + "owner": "hercules-ci", + "repo": "gitignore.nix", + "rev": "a20de23b925fd8264fd7fad6454652e142fd7f73", + "type": "github" + }, + "original": { + "owner": "hercules-ci", + "repo": "gitignore.nix", + "type": "github" + } + }, + "lowdown-src": { + "flake": false, + "locked": { + "lastModified": 1633514407, + "narHash": "sha256-Dw32tiMjdK9t3ETl5fzGrutQTzh2rufgZV4A/BbxuD4=", + "owner": "kristapsdz", + "repo": "lowdown", + "rev": "d2c2b44ff6c27b936ec27358a2653caaef8f73b8", + "type": "github" + }, + "original": { + "owner": "kristapsdz", + "repo": "lowdown", + "type": "github" + } + }, + "nix": { + "inputs": { + "lowdown-src": "lowdown-src", + "nixpkgs": [ + "devenv", + "nixpkgs" + ], + "nixpkgs-regression": "nixpkgs-regression" + }, + "locked": { + "lastModified": 1676545802, + "narHash": "sha256-EK4rZ+Hd5hsvXnzSzk2ikhStJnD63odF7SzsQ8CuSPU=", + "owner": "domenkozar", + "repo": "nix", + "rev": "7c91803598ffbcfe4a55c44ac6d49b2cf07a527f", + "type": "github" + }, + "original": { + "owner": "domenkozar", + "ref": "relaxed-flakes", + "repo": "nix", + "type": "github" + } + }, + "nixpkgs": { + "locked": { + "lastModified": 1678875422, + "narHash": "sha256-T3o6NcQPwXjxJMn2shz86Chch4ljXgZn746c2caGxd8=", + "owner": "NixOS", + "repo": "nixpkgs", + "rev": "126f49a01de5b7e35a43fd43f891ecf6d3a51459", + "type": "github" + }, + "original": { + "owner": "NixOS", + "ref": "nixpkgs-unstable", + "repo": "nixpkgs", + "type": "github" + } + }, + "nixpkgs-python": { + "inputs": { + "flake-compat": "flake-compat_2", + "flake-utils": "flake-utils_2", + "nixpkgs": "nixpkgs_3" + }, + "locked": { + "lastModified": 1698162272, + "narHash": "sha256-6rq0AcQnC3AiR9PGpQrZXeiPMCNpywQWtNdS9TxVxfs=", + "owner": "cachix", + "repo": "nixpkgs-python", + "rev": "7cbac423b7109805bb25c642043230c36d1952df", + "type": "github" + }, + "original": { + "owner": "cachix", + "repo": "nixpkgs-python", + "type": "github" + } + }, + "nixpkgs-regression": { + "locked": { + "lastModified": 1643052045, + "narHash": "sha256-uGJ0VXIhWKGXxkeNnq4TvV3CIOkUJ3PAoLZ3HMzNVMw=", + "owner": "NixOS", + "repo": "nixpkgs", + "rev": "215d4d0fd80ca5163643b03a33fde804a29cc1e2", + "type": "github" + }, + "original": { + "owner": "NixOS", + "repo": "nixpkgs", + "rev": "215d4d0fd80ca5163643b03a33fde804a29cc1e2", + "type": "github" + } + }, + "nixpkgs-stable": { + "locked": { + "lastModified": 1685801374, + "narHash": "sha256-otaSUoFEMM+LjBI1XL/xGB5ao6IwnZOXc47qhIgJe8U=", + "owner": "NixOS", + "repo": "nixpkgs", + "rev": "c37ca420157f4abc31e26f436c1145f8951ff373", + "type": "github" + }, + "original": { + "owner": "NixOS", + "ref": "nixos-23.05", + "repo": "nixpkgs", + "type": "github" + } + }, + "nixpkgs_2": { + "locked": { + "lastModified": 1698942558, + "narHash": "sha256-/UmnB+mEd6Eg3mJBrAgqRcyZX//RSjHphcCO7Ig9Bpk=", + "owner": "NixOS", + "repo": "nixpkgs", + "rev": "621f51253edffa1d6f08d5fce4f08614c852d17e", + "type": "github" + }, + "original": { + "owner": "NixOS", + "ref": "nixos-23.05", + "repo": "nixpkgs", + "type": "github" + } + }, + "nixpkgs_3": { + "locked": { + "lastModified": 1685974512, + "narHash": "sha256-WLPHpe96RbPRO9iDtCxgsYkadTheRq7wqXWdGpR6g7w=", + "owner": "domenkozar", + "repo": "nixpkgs", + "rev": "1102477695918daba466123cc2ef694ed3a49939", + "type": "github" + }, + "original": { + "owner": "domenkozar", + "ref": "cpython-moduralize", + "repo": "nixpkgs", + "type": "github" + } + }, + "pre-commit-hooks": { + "inputs": { + "flake-compat": [ + "devenv", + "flake-compat" + ], + "flake-utils": "flake-utils", + "gitignore": "gitignore", + "nixpkgs": [ + "devenv", + "nixpkgs" + ], + "nixpkgs-stable": "nixpkgs-stable" + }, + "locked": { + "lastModified": 1688056373, + "narHash": "sha256-2+SDlNRTKsgo3LBRiMUcoEUb6sDViRNQhzJquZ4koOI=", + "owner": "cachix", + "repo": "pre-commit-hooks.nix", + "rev": "5843cf069272d92b60c3ed9e55b7a8989c01d4c7", + "type": "github" + }, + "original": { + "owner": "cachix", + "repo": "pre-commit-hooks.nix", + "type": "github" + } + }, + "root": { + "inputs": { + "devenv": "devenv", + "nixpkgs": "nixpkgs_2", + "nixpkgs-python": "nixpkgs-python", + "systems": "systems_3" + } + }, + "systems": { + "locked": { + "lastModified": 1681028828, + "narHash": "sha256-Vy1rq5AaRuLzOxct8nz4T6wlgyUR7zLU309k9mBC768=", + "owner": "nix-systems", + "repo": "default", + "rev": "da67096a3b9bf56a91d16901293e51ba5b49a27e", + "type": "github" + }, + "original": { + "owner": "nix-systems", + "repo": "default", + "type": "github" + } + }, + "systems_2": { + "locked": { + "lastModified": 1681028828, + "narHash": "sha256-Vy1rq5AaRuLzOxct8nz4T6wlgyUR7zLU309k9mBC768=", + "owner": "nix-systems", + "repo": "default", + "rev": "da67096a3b9bf56a91d16901293e51ba5b49a27e", + "type": "github" + }, + "original": { + "owner": "nix-systems", + "repo": "default", + "type": "github" + } + }, + "systems_3": { + "locked": { + "lastModified": 1681028828, + "narHash": "sha256-Vy1rq5AaRuLzOxct8nz4T6wlgyUR7zLU309k9mBC768=", + "owner": "nix-systems", + "repo": "default", + "rev": "da67096a3b9bf56a91d16901293e51ba5b49a27e", + "type": "github" + }, + "original": { + "owner": "nix-systems", + "repo": "default", + "type": "github" + } + } + }, + "root": "root", + "version": 7 +} diff --git a/flake.nix b/flake.nix new file mode 100644 index 000000000..b56b07966 --- /dev/null +++ b/flake.nix @@ -0,0 +1,57 @@ +{ + inputs = { + nixpkgs.url = "github:NixOS/nixpkgs/nixos-23.05"; + systems.url = "github:nix-systems/default"; + devenv.url = "github:cachix/devenv"; + nixpkgs-python.url = "github:cachix/nixpkgs-python"; + }; + + outputs = { + self, + nixpkgs, + devenv, + systems, + ... + } @ inputs: let + forEachSystem = nixpkgs.lib.genAttrs (import systems); + in { + packages = forEachSystem (system: { + default = + nixpkgs.legacyPackages.${system}.poetry2nix.mkPoetryApplication + { + projectDir = self; + preferWheels = true; + }; + }); + + devShells = + forEachSystem + (system: let + pkgs = nixpkgs.legacyPackages.${system}; + in { + default = devenv.lib.mkShell { + inherit inputs pkgs; + modules = [ + { + packages = with pkgs; [pre-commit]; + + languages.python = { + enable = true; + poetry = { + enable = true; + install.enable = true; + install.allExtras = true; + }; + version = "3.11"; + }; + } + ]; + }; + }); + }; + + nixConfig = { + extra-trusted-public-keys = "devenv.cachix.org-1:w1cLUi8dv3hnoSPGAuibQv+f9TZLr6cv/Hm9XgU50cw="; + extra-substituters = "https://devenv.cachix.org"; + }; +} From bc255d650e36fca4cb38087e57c44d47cc93163e Mon Sep 17 00:00:00 2001 From: Alessandro Candido Date: Sat, 4 Nov 2023 11:45:00 +0100 Subject: [PATCH 2/7] Rearrange Poetry groups more consistently --- poetry.lock | 1826 ++++++++++++++++++++++++------------------------ pyproject.toml | 9 +- 2 files changed, 924 insertions(+), 911 deletions(-) diff --git a/poetry.lock b/poetry.lock index 6cadef232..50592a8a9 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand. [[package]] name = "alabaster" @@ -38,14 +38,14 @@ files = [ [[package]] name = "astroid" -version = "2.15.6" +version = "2.15.8" description = "An abstract syntax tree for Python with inference support." category = "dev" optional = false python-versions = ">=3.7.2" files = [ - {file = "astroid-2.15.6-py3-none-any.whl", hash = "sha256:389656ca57b6108f939cf5d2f9a2a825a3be50ba9d589670f393236e0a03b91c"}, - {file = "astroid-2.15.6.tar.gz", hash = "sha256:903f024859b7c7687d7a7f3a3f73b17301f8e42dfd9cc9df9d4418172d3e2dbd"}, + {file = "astroid-2.15.8-py3-none-any.whl", hash = "sha256:1aa149fc5c6589e3d0ece885b4491acd80af4f087baafa3fb5203b113e68cd3c"}, + {file = "astroid-2.15.8.tar.gz", hash = "sha256:6c107453dffee9055899705de3c9ead36e74119cee151e5a9aaf7f0b0e020a6a"}, ] [package.dependencies] @@ -58,21 +58,22 @@ wrapt = [ [[package]] name = "asttokens" -version = "2.2.1" +version = "2.4.1" description = "Annotate AST trees with source code positions" category = "main" optional = false python-versions = "*" files = [ - {file = "asttokens-2.2.1-py2.py3-none-any.whl", hash = "sha256:6b0ac9e93fb0335014d382b8fa9b3afa7df546984258005da0b9e7095b3deb1c"}, - {file = "asttokens-2.2.1.tar.gz", hash = "sha256:4622110b2a6f30b77e1473affaa97e711bc2f07d3f10848420ff1898edbe94f3"}, + {file = "asttokens-2.4.1-py2.py3-none-any.whl", hash = "sha256:051ed49c3dcae8913ea7cd08e46a606dba30b79993209636c4875bc1d637bc24"}, + {file = "asttokens-2.4.1.tar.gz", hash = "sha256:b03869718ba9a6eb027e134bfdf69f38a236d681c83c160d510768af11254ba0"}, ] [package.dependencies] -six = "*" +six = ">=1.12.0" [package.extras] -test = ["astroid", "pytest"] +astroid = ["astroid (>=1,<2)", "astroid (>=2,<4)"] +test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"] [[package]] name = "asv" @@ -112,19 +113,22 @@ tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pyte [[package]] name = "babel" -version = "2.12.1" +version = "2.13.1" description = "Internationalization utilities" category = "dev" optional = false python-versions = ">=3.7" files = [ - {file = "Babel-2.12.1-py3-none-any.whl", hash = "sha256:b4246fb7677d3b98f501a39d43396d3cafdc8eadb045f4a31be01863f655c610"}, - {file = "Babel-2.12.1.tar.gz", hash = "sha256:cc2d99999cd01d44420ae725a21c9e3711b3aadc7976d6147f622d8581963455"}, + {file = "Babel-2.13.1-py3-none-any.whl", hash = "sha256:7077a4984b02b6727ac10f1f7294484f737443d7e2e66c5e4380e41a3ae0b4ed"}, + {file = "Babel-2.13.1.tar.gz", hash = "sha256:33e0952d7dd6374af8dbf6768cc4ddf3ccfefc244f9986d4074704f2fbd18900"}, ] [package.dependencies] pytz = {version = ">=2015.7", markers = "python_version < \"3.9\""} +[package.extras] +dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"] + [[package]] name = "backcall" version = "0.2.0" @@ -139,14 +143,14 @@ files = [ [[package]] name = "banana-hep" -version = "0.6.9" +version = "0.6.11" description = "Benchmark QCD physics" category = "main" optional = true python-versions = ">=3.8.0,<3.12" files = [ - {file = "banana_hep-0.6.9-py3-none-any.whl", hash = "sha256:e857b777eb0f64b0bf5e0a2b7cc6afcb5680a60dc3bdd7ce9c34c4bf3b94828b"}, - {file = "banana_hep-0.6.9.tar.gz", hash = "sha256:0b9f5cd3e4e44d5c8117bab93c832784009feb6d87d5a874da0d47fc91ab0514"}, + {file = "banana_hep-0.6.11-py3-none-any.whl", hash = "sha256:5eed795c5e9b2cdcb93a49df1180832a43cabfa7a4703e7dcb7ed26c3a897e4f"}, + {file = "banana_hep-0.6.11.tar.gz", hash = "sha256:e1e7f4af2f64ca17c9992ab3a4fc857fb43fbb316a3e781156d465f1ddea452d"}, ] [package.dependencies] @@ -182,14 +186,14 @@ lxml = ["lxml"] [[package]] name = "bleach" -version = "6.0.0" +version = "6.1.0" description = "An easy safelist-based HTML-sanitizing tool." category = "dev" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "bleach-6.0.0-py3-none-any.whl", hash = "sha256:33c16e3353dbd13028ab4799a0f89a83f113405c766e9c122df8a06f5b85b3f4"}, - {file = "bleach-6.0.0.tar.gz", hash = "sha256:1a1a85c1595e07d8db14c5f09f09e6433502c51c595970edc090551f0db99414"}, + {file = "bleach-6.1.0-py3-none-any.whl", hash = "sha256:3225f354cfc436b9789c66c4ee030194bee0568fbf9cbdad3bc8b5c26c5f12b6"}, + {file = "bleach-6.1.0.tar.gz", hash = "sha256:0a31f1837963c41d46bbf1331b8778e1308ea0791db03cc4e7357b97cf42a8fe"}, ] [package.dependencies] @@ -197,7 +201,7 @@ six = ">=1.9.0" webencodings = "*" [package.extras] -css = ["tinycss2 (>=1.1.0,<1.2)"] +css = ["tinycss2 (>=1.1.0,<1.3)"] [[package]] name = "certifi" @@ -213,76 +217,64 @@ files = [ [[package]] name = "cffi" -version = "1.15.1" +version = "1.16.0" description = "Foreign Function Interface for Python calling C code." category = "dev" optional = false -python-versions = "*" +python-versions = ">=3.8" files = [ - {file = "cffi-1.15.1-cp27-cp27m-macosx_10_9_x86_64.whl", hash = "sha256:a66d3508133af6e8548451b25058d5812812ec3798c886bf38ed24a98216fab2"}, - {file = "cffi-1.15.1-cp27-cp27m-manylinux1_i686.whl", hash = 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"sha256:9e6ec080259b9a5940c797d58b613b5e31441c2257b87c2e795c5228ae80d2d8"}, - {file = "traitlets-5.9.0.tar.gz", hash = "sha256:f6cde21a9c68cf756af02035f72d5a723bf607e862e7be33ece505abf4a3bad9"}, + {file = "traitlets-5.13.0-py3-none-any.whl", hash = "sha256:baf991e61542da48fe8aef8b779a9ea0aa38d8a54166ee250d5af5ecf4486619"}, + {file = "traitlets-5.13.0.tar.gz", hash = "sha256:9b232b9430c8f57288c1024b34a8f0251ddcc47268927367a0dd3eeaca40deb5"}, ] [package.extras] docs = ["myst-parser", "pydata-sphinx-theme", "sphinx"] -test = ["argcomplete (>=2.0)", "pre-commit", "pytest", "pytest-mock"] +test = ["argcomplete (>=3.0.3)", "mypy (>=1.6.0)", "pre-commit", "pytest (>=7.0,<7.5)", "pytest-mock", "pytest-mypy-testing"] [[package]] name = "typing-extensions" -version = "4.7.1" -description = "Backported and Experimental Type Hints for Python 3.7+" +version = "4.8.0" +description = "Backported and Experimental Type Hints for Python 3.8+" category = "main" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "typing_extensions-4.7.1-py3-none-any.whl", hash = "sha256:440d5dd3af93b060174bf433bccd69b0babc3b15b1a8dca43789fd7f61514b36"}, - {file = "typing_extensions-4.7.1.tar.gz", hash = "sha256:b75ddc264f0ba5615db7ba217daeb99701ad295353c45f9e95963337ceeeffb2"}, + {file = "typing_extensions-4.8.0-py3-none-any.whl", hash = "sha256:8f92fc8806f9a6b641eaa5318da32b44d401efaac0f6678c9bc448ba3605faa0"}, + {file = "typing_extensions-4.8.0.tar.gz", hash = "sha256:df8e4339e9cb77357558cbdbceca33c303714cf861d1eef15e1070055ae8b7ef"}, ] [[package]] @@ -3221,37 +3253,16 @@ secure = ["certifi", "cryptography (>=1.9)", "idna (>=2.0.0)", "pyopenssl (>=17. socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"] zstd = ["zstandard (>=0.18.0)"] -[[package]] -name = "virtualenv" -version = "20.24.3" -description = "Virtual Python Environment builder" -category = "dev" -optional = false -python-versions = ">=3.7" -files = [ - {file = "virtualenv-20.24.3-py3-none-any.whl", hash = "sha256:95a6e9398b4967fbcb5fef2acec5efaf9aa4972049d9ae41f95e0972a683fd02"}, - {file = "virtualenv-20.24.3.tar.gz", hash = "sha256:e5c3b4ce817b0b328af041506a2a299418c98747c4b1e68cb7527e74ced23efc"}, -] - -[package.dependencies] -distlib = ">=0.3.7,<1" -filelock = ">=3.12.2,<4" -platformdirs = ">=3.9.1,<4" - -[package.extras] -docs = ["furo (>=2023.5.20)", "proselint (>=0.13)", "sphinx (>=7.0.1)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=23.6)"] -test = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=23.1)", "pytest (>=7.4)", "pytest-env (>=0.8.2)", "pytest-freezer (>=0.4.8)", "pytest-mock (>=3.11.1)", "pytest-randomly (>=3.12)", "pytest-timeout (>=2.1)", "setuptools (>=68)", "time-machine (>=2.10)"] - [[package]] name = "wcwidth" -version = "0.2.6" +version = "0.2.9" description = "Measures the displayed width of unicode strings in a terminal" category = "main" optional = false python-versions = "*" files = [ - {file = "wcwidth-0.2.6-py2.py3-none-any.whl", hash = "sha256:795b138f6875577cd91bba52baf9e445cd5118fd32723b460e30a0af30ea230e"}, - {file = "wcwidth-0.2.6.tar.gz", hash = "sha256:a5220780a404dbe3353789870978e472cfe477761f06ee55077256e509b156d0"}, + {file = "wcwidth-0.2.9-py2.py3-none-any.whl", hash = "sha256:9a929bd8380f6cd9571a968a9c8f4353ca58d7cd812a4822bba831f8d685b223"}, + {file = "wcwidth-0.2.9.tar.gz", hash = "sha256:a675d1a4a2d24ef67096a04b85b02deeecd8e226f57b5e3a72dbb9ed99d27da8"}, ] [[package]] @@ -3268,15 +3279,22 @@ files = [ [[package]] name = "wmctrl" -version = "0.4" +version = "0.5" description = "A tool to programmatically control windows inside X" category = "dev" optional = false -python-versions = "*" +python-versions = ">=2.7" files = [ - {file = "wmctrl-0.4.tar.gz", hash = "sha256:66cbff72b0ca06a22ec3883ac3a4d7c41078bdae4fb7310f52951769b10e14e0"}, + {file = "wmctrl-0.5-py2.py3-none-any.whl", hash = "sha256:ae695c1863a314c899e7cf113f07c0da02a394b968c4772e1936219d9234ddd7"}, + {file = "wmctrl-0.5.tar.gz", hash = "sha256:7839a36b6fe9e2d6fd22304e5dc372dbced2116ba41283ea938b2da57f53e962"}, ] +[package.dependencies] +attrs = "*" + +[package.extras] +test = ["pytest"] + [[package]] name = "wrapt" version = "1.15.0" @@ -3364,18 +3382,18 @@ files = [ [[package]] name = "zipp" -version = "3.16.2" +version = "3.17.0" description = "Backport of pathlib-compatible object wrapper for zip files" category = "main" optional = false python-versions = ">=3.8" files = [ - {file = "zipp-3.16.2-py3-none-any.whl", hash = "sha256:679e51dd4403591b2d6838a48de3d283f3d188412a9782faadf845f298736ba0"}, - {file = "zipp-3.16.2.tar.gz", hash = "sha256:ebc15946aa78bd63458992fc81ec3b6f7b1e92d51c35e6de1c3804e73b799147"}, + {file = "zipp-3.17.0-py3-none-any.whl", hash = "sha256:0e923e726174922dce09c53c59ad483ff7bbb8e572e00c7f7c46b88556409f31"}, + {file = "zipp-3.17.0.tar.gz", hash = "sha256:84e64a1c28cf7e91ed2078bb8cc8c259cb19b76942096c8d7b84947690cabaf0"}, ] [package.extras] -docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] +docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (<7.2.5)", "sphinx (>=3.5)", "sphinx-lint"] testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"] [extras] @@ -3386,4 +3404,4 @@ mark = ["banana-hep", "sqlalchemy"] [metadata] lock-version = "2.0" python-versions = ">=3.8,<3.12" -content-hash = "7b79767b262df8457e9b76de201c42651646f1e6f68980b93de95b31ec7da5a2" +content-hash = "4dd730ff39df843badbc23b58969c934a767d51160bf1a64b44b2dc3fa077d7b" diff --git a/pyproject.toml b/pyproject.toml index 3d325ec69..b15ba5037 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -51,15 +51,8 @@ banana-hep = { version = "^0.6.6", optional = true } sqlalchemy = { version = "^1.4.21", optional = true } [tool.poetry.group.dev.dependencies] -poethepoet = "^0.10.0" -# code review -pylint = "^2.9.3" -# debug / explore pdbpp = "^0.10.3" ipython = "^8.10.0" -# benchmark -asv = "^0.4.2" -virtualenv = "^20.13.2" [tool.poetry.group.test] optional = true @@ -69,6 +62,8 @@ pytest = "^7.2.0" pytest-cov = "^4.0.0" pytest-env = "^0.6.2" hypothesis = "^6.39.3" +asv = "^0.4.2" +pylint = "^2.9.3" [tool.poetry.group.docs] optional = true From 60b87f9c43e836ac5db0fd67dc1fbf1e3c4d404f Mon Sep 17 00:00:00 2001 From: Alessandro Candido Date: Sat, 4 Nov 2023 12:10:33 +0100 Subject: [PATCH 3/7] Remove docs extra Not used any longer for RTD --- pyproject.toml | 8 -------- 1 file changed, 8 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index b15ba5037..fd47bfcd2 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -79,14 +79,6 @@ nbsphinx = "^0.8.6" [tool.poetry.extras] mark = ["banana-hep", "sqlalchemy"] box = ["pineappl"] -docs = [ - "sphinx", - "sphinx-rtd-theme", - "recommonmark", - "sphinxcontrib-bibtex", - "sphinxcontrib-details-directive", - "nbsphinx", -] [tool.poetry.scripts] yadnav = "yadmark.navigator:launch_navigator" From addadfbc02e58678c0105ebedf62378a9429a4a4 Mon Sep 17 00:00:00 2001 From: Alessandro Candido Date: Sat, 4 Nov 2023 12:27:39 +0100 Subject: [PATCH 4/7] Add poetry groups --- flake.nix | 1 + 1 file changed, 1 insertion(+) diff --git a/flake.nix b/flake.nix index b56b07966..2e94f7163 100644 --- a/flake.nix +++ b/flake.nix @@ -40,6 +40,7 @@ poetry = { enable = true; install.enable = true; + install.groups = ["dev" "test"]; install.allExtras = true; }; version = "3.11"; From 293b2b06c8bad7c6c1010a7a9264e9d619c4ed59 Mon Sep 17 00:00:00 2001 From: Alessandro Candido Date: Sun, 5 Nov 2023 16:05:56 +0100 Subject: [PATCH 5/7] Move to nixpkgs-unstable Mainly to unlock poethepoet --- flake.lock | 8 +-- flake.nix | 2 +- poetry.lock | 156 ++++------------------------------------------------ 3 files changed, 16 insertions(+), 150 deletions(-) diff --git a/flake.lock b/flake.lock index d6ec877c1..d959a2aac 100644 --- a/flake.lock +++ b/flake.lock @@ -220,16 +220,16 @@ }, "nixpkgs_2": { "locked": { - "lastModified": 1698942558, - "narHash": "sha256-/UmnB+mEd6Eg3mJBrAgqRcyZX//RSjHphcCO7Ig9Bpk=", + "lastModified": 1699099776, + "narHash": "sha256-X09iKJ27mGsGambGfkKzqvw5esP1L/Rf8H3u3fCqIiU=", "owner": "NixOS", "repo": "nixpkgs", - "rev": "621f51253edffa1d6f08d5fce4f08614c852d17e", + "rev": "85f1ba3e51676fa8cc604a3d863d729026a6b8eb", "type": "github" }, "original": { "owner": "NixOS", - "ref": "nixos-23.05", + "ref": "nixos-unstable", "repo": "nixpkgs", "type": "github" } diff --git a/flake.nix b/flake.nix index 2e94f7163..d7222bce3 100644 --- a/flake.nix +++ b/flake.nix @@ -1,6 +1,6 @@ { inputs = { - nixpkgs.url = "github:NixOS/nixpkgs/nixos-23.05"; + nixpkgs.url = "github:NixOS/nixpkgs/nixos-unstable"; systems.url = "github:nix-systems/default"; devenv.url = "github:cachix/devenv"; nixpkgs-python.url = "github:cachix/nixpkgs-python"; diff --git a/poetry.lock b/poetry.lock index 50592a8a9..bc96455cc 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,10 +1,9 @@ -# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand. [[package]] name = "alabaster" version = "0.7.13" description = "A configurable sidebar-enabled Sphinx theme" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -16,7 +15,6 @@ files = [ name = "appdirs" version = "1.4.4" description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." -category = "main" optional = true python-versions = "*" files = [ @@ -28,7 +26,6 @@ files = [ name = "appnope" version = "0.1.3" description = "Disable App Nap on macOS >= 10.9" -category = "main" optional = false python-versions = "*" files = [ @@ -40,7 +37,6 @@ files = [ name = "astroid" version = "2.15.8" description = "An abstract syntax tree for Python with inference support." -category = "dev" optional = false python-versions = ">=3.7.2" files = [ @@ -60,7 +56,6 @@ wrapt = [ name = "asttokens" version = "2.4.1" description = "Annotate AST trees with source code positions" -category = "main" optional = false python-versions = "*" files = [ @@ -79,7 +74,6 @@ test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"] name = "asv" version = "0.4.2" description = "Airspeed Velocity: A simple Python history benchmarking tool" -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -96,7 +90,6 @@ hg = ["python-hglib (>=1.5)"] name = "attrs" version = "23.1.0" description = "Classes Without Boilerplate" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -115,7 +108,6 @@ tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pyte name = "babel" version = "2.13.1" description = "Internationalization utilities" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -133,7 +125,6 @@ dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"] name = "backcall" version = "0.2.0" description = "Specifications for callback functions passed in to an API" -category = "main" optional = false python-versions = "*" files = [ @@ -145,7 +136,6 @@ files = [ name = "banana-hep" version = "0.6.11" description = "Benchmark QCD physics" -category = "main" optional = true python-versions = ">=3.8.0,<3.12" files = [ @@ -169,7 +159,6 @@ SQLAlchemy = ">=1.4.29,<2.0.0" name = "beautifulsoup4" version = "4.12.2" description = "Screen-scraping library" -category = "dev" optional = false python-versions = ">=3.6.0" files = [ @@ -188,7 +177,6 @@ lxml = ["lxml"] name = "bleach" version = "6.1.0" description = "An easy safelist-based HTML-sanitizing tool." -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -207,7 +195,6 @@ css = ["tinycss2 (>=1.1.0,<1.3)"] name = "certifi" version = "2023.7.22" description = "Python package for providing Mozilla's CA Bundle." -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -219,7 +206,6 @@ files = [ name = "cffi" version = "1.16.0" description = "Foreign Function Interface for Python calling C code." -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -284,7 +270,6 @@ pycparser = "*" name = "charset-normalizer" version = "3.3.2" description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet." -category = "dev" optional = false python-versions = ">=3.7.0" files = [ @@ -384,7 +369,6 @@ files = [ name = "click" version = "8.1.7" description = "Composable command line interface toolkit" -category = "main" optional = true python-versions = ">=3.7" files = [ @@ -399,7 +383,6 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""} name = "colorama" version = "0.4.6" description = "Cross-platform colored terminal text." -category = "main" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7" files = [ @@ -411,7 +394,6 @@ files = [ name = "commonmark" version = "0.9.1" description = "Python parser for the CommonMark Markdown spec" -category = "main" optional = false python-versions = "*" files = [ @@ -426,7 +408,6 @@ test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"] name = "contourpy" version = "1.1.1" description = "Python library for calculating contours of 2D quadrilateral grids" -category = "main" optional = true python-versions = ">=3.8" files = [ @@ -498,7 +479,6 @@ test-no-images = ["pytest", "pytest-cov", "wurlitzer"] name = "coverage" version = "7.3.2" description = "Code coverage measurement for Python" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -566,7 +546,6 @@ toml = ["tomli"] name = "cycler" version = "0.12.1" description = "Composable style cycles" -category = "main" optional = true python-versions = ">=3.8" files = [ @@ -582,7 +561,6 @@ tests = ["pytest", "pytest-cov", "pytest-xdist"] name = "decorator" version = "5.1.1" description = "Decorators for Humans" -category = "main" optional = false python-versions = ">=3.5" files = [ @@ -594,7 +572,6 @@ files = [ name = "defusedxml" version = "0.7.1" description = "XML bomb protection for Python stdlib modules" -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -606,7 +583,6 @@ files = [ name = "dill" version = "0.3.7" description = "serialize all of Python" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -621,7 +597,6 @@ graph = ["objgraph (>=1.7.2)"] name = "docutils" version = "0.16" description = "Docutils -- Python Documentation Utilities" -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -633,7 +608,6 @@ files = [ name = "eko" version = "0.13.5" description = "Evolution Kernel Operators" -category = "main" optional = false python-versions = ">=3.8,<3.12" files = [ @@ -656,7 +630,6 @@ mark = ["banana-hep (>=0.6.9,<0.7.0)", "matplotlib (>=3.5.1,<4.0.0)", "pandas (> name = "exceptiongroup" version = "1.1.3" description = "Backport of PEP 654 (exception groups)" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -671,7 +644,6 @@ test = ["pytest (>=6)"] name = "executing" version = "2.0.1" description = "Get the currently executing AST node of a frame, and other information" -category = "main" optional = false python-versions = ">=3.5" files = [ @@ -686,7 +658,6 @@ tests = ["asttokens (>=2.1.0)", "coverage", "coverage-enable-subprocess", "ipyth name = "fancycompleter" version = "0.9.1" description = "colorful TAB completion for Python prompt" -category = "dev" optional = false python-versions = "*" files = [ @@ -702,7 +673,6 @@ pyrepl = ">=0.8.2" name = "fastjsonschema" version = "2.18.1" description = "Fastest Python implementation of JSON schema" -category = "dev" optional = false python-versions = "*" files = [ @@ -717,7 +687,6 @@ devel = ["colorama", "json-spec", "jsonschema", "pylint", "pytest", "pytest-benc name = "fonttools" version = "4.44.0" description = "Tools to manipulate font files" -category = "main" optional = true python-versions = ">=3.8" files = [ @@ -783,7 +752,6 @@ woff = ["brotli (>=1.0.1)", "brotlicffi (>=0.8.0)", "zopfli (>=0.1.4)"] name = "greenlet" version = "3.0.1" description = "Lightweight in-process concurrent programming" -category = "main" optional = true python-versions = ">=3.7" files = [ @@ -852,14 +820,13 @@ test = ["objgraph", "psutil"] [[package]] name = "hypothesis" -version = "6.88.1" +version = "6.88.3" description = "A library for property-based testing" -category = "dev" optional = false python-versions = ">=3.8" files = [ - {file = "hypothesis-6.88.1-py3-none-any.whl", hash = "sha256:b45b8a651dfe4ce26f900ce6ccbce997d4fbec39ba03dd243516bf81fea8c0b8"}, - {file = "hypothesis-6.88.1.tar.gz", hash = "sha256:f4c2c004b9ec3e0e25332ad2cb6b91eba477a855557a7b5c6e79068809ff8b51"}, + {file = "hypothesis-6.88.3-py3-none-any.whl", hash = "sha256:781ce6fd35e11ca77ad132a20cebe66fd215f56678f8efd6b87013b14500151b"}, + {file = "hypothesis-6.88.3.tar.gz", hash = "sha256:5cfda253e34726c98ab04b9595fca15677ee9f4f6055146aea25a6278d71f6f1"}, ] [package.dependencies] @@ -887,7 +854,6 @@ zoneinfo = ["backports.zoneinfo (>=0.2.1)", "tzdata (>=2023.3)"] name = "idna" version = "3.4" description = "Internationalized Domain Names in Applications (IDNA)" -category = "dev" optional = false python-versions = ">=3.5" files = [ @@ -899,7 +865,6 @@ files = [ name = "imagesize" version = "1.4.1" description = "Getting image size from png/jpeg/jpeg2000/gif file" -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -911,7 +876,6 @@ files = [ name = "importlib-metadata" version = "6.8.0" description = "Read metadata from Python packages" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -931,7 +895,6 @@ testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs name = "importlib-resources" version = "6.1.0" description = "Read resources from Python packages" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -950,7 +913,6 @@ testing = ["pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", name = "iniconfig" version = "2.0.0" description = "brain-dead simple config-ini parsing" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -962,7 +924,6 @@ files = [ name = "ipython" version = "8.12.3" description = "IPython: Productive Interactive Computing" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -1002,7 +963,6 @@ test-extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.21)", "pa name = "isort" version = "5.12.0" description = "A Python utility / library to sort Python imports." -category = "dev" optional = false python-versions = ">=3.8.0" files = [ @@ -1020,7 +980,6 @@ requirements-deprecated-finder = ["pip-api", "pipreqs"] name = "jedi" version = "0.19.1" description = "An autocompletion tool for Python that can be used for text editors." -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -1040,7 +999,6 @@ testing = ["Django", "attrs", "colorama", "docopt", "pytest (<7.0.0)"] name = "jinja2" version = "3.1.2" description = "A very fast and expressive template engine." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1058,7 +1016,6 @@ i18n = ["Babel (>=2.7)"] name = "jsonschema" version = "4.19.2" description = "An implementation of JSON Schema validation for Python" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -1082,7 +1039,6 @@ format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339- name = "jsonschema-specifications" version = "2023.7.1" description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -1098,7 +1054,6 @@ referencing = ">=0.28.0" name = "jupyter-client" version = "8.5.0" description = "Jupyter protocol implementation and client libraries" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -1108,7 +1063,7 @@ files = [ [package.dependencies] importlib-metadata = {version = ">=4.8.3", markers = "python_version < \"3.10\""} -jupyter-core = ">=4.12,<5.0.0 || >=5.1.0" +jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0" python-dateutil = ">=2.8.2" pyzmq = ">=23.0" tornado = ">=6.2" @@ -1122,7 +1077,6 @@ test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-commit", "pyt name = "jupyter-core" version = "5.5.0" description = "Jupyter core package. A base package on which Jupyter projects rely." -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -1143,7 +1097,6 @@ test = ["ipykernel", "pre-commit", "pytest", "pytest-cov", "pytest-timeout"] name = "jupyterlab-pygments" version = "0.2.2" description = "Pygments theme using JupyterLab CSS variables" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1155,7 +1108,6 @@ files = [ name = "kiwisolver" version = "1.4.5" description = "A fast implementation of the Cassowary constraint solver" -category = "main" optional = true python-versions = ">=3.7" files = [ @@ -1269,7 +1221,6 @@ files = [ name = "latexcodec" version = "2.0.1" description = "A lexer and codec to work with LaTeX code in Python." -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -1284,7 +1235,6 @@ six = ">=1.4.1" name = "lazy-object-proxy" version = "1.9.0" description = "A fast and thorough lazy object proxy." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1330,7 +1280,6 @@ files = [ name = "leprohq" version = "0.2.5" description = "(Un-)polarized Leptoproduction of Heavy Quarks" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -1346,7 +1295,6 @@ scipy = "*" name = "llvmlite" version = "0.40.1" description = "lightweight wrapper around basic LLVM functionality" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -1380,7 +1328,6 @@ files = [ name = "lz4" version = "4.3.2" description = "LZ4 Bindings for Python" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -1430,7 +1377,6 @@ tests = ["psutil", "pytest (!=3.3.0)", "pytest-cov"] name = "markupsafe" version = "2.1.3" description = "Safely add untrusted strings to HTML/XML markup." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1500,7 +1446,6 @@ files = [ name = "matplotlib" version = "3.7.3" description = "Python plotting package" -category = "main" optional = true python-versions = ">=3.8" files = [ @@ -1570,7 +1515,6 @@ setuptools_scm = ">=7" name = "matplotlib-inline" version = "0.1.6" description = "Inline Matplotlib backend for Jupyter" -category = "main" optional = false python-versions = ">=3.5" files = [ @@ -1585,7 +1529,6 @@ traitlets = "*" name = "mccabe" version = "0.7.0" description = "McCabe checker, plugin for flake8" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -1597,7 +1540,6 @@ files = [ name = "mistune" version = "3.0.2" description = "A sane and fast Markdown parser with useful plugins and renderers" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -1609,7 +1551,6 @@ files = [ name = "nbclient" version = "0.8.0" description = "A client library for executing notebooks. Formerly nbconvert's ExecutePreprocessor." -category = "dev" optional = false python-versions = ">=3.8.0" files = [ @@ -1619,7 +1560,7 @@ files = [ [package.dependencies] jupyter-client = ">=6.1.12" -jupyter-core = ">=4.12,<5.0.0 || >=5.1.0" +jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0" nbformat = ">=5.1" traitlets = ">=5.4" @@ -1632,7 +1573,6 @@ test = ["flaky", "ipykernel (>=6.19.3)", "ipython", "ipywidgets", "nbconvert (>= name = "nbconvert" version = "7.10.0" description = "Converting Jupyter Notebooks" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -1671,7 +1611,6 @@ webpdf = ["playwright"] name = "nbformat" version = "5.9.2" description = "The Jupyter Notebook format" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -1693,7 +1632,6 @@ test = ["pep440", "pre-commit", "pytest", "testpath"] name = "nbsphinx" version = "0.8.12" description = "Jupyter Notebook Tools for Sphinx" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -1713,7 +1651,6 @@ traitlets = ">=5" name = "numba" version = "0.57.1" description = "compiling Python code using LLVM" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -1745,14 +1682,13 @@ files = [ [package.dependencies] importlib-metadata = {version = "*", markers = "python_version < \"3.9\""} -llvmlite = ">=0.40.0dev0,<0.41" +llvmlite = "==0.40.*" numpy = ">=1.21,<1.25" [[package]] name = "numpy" version = "1.24.4" description = "Fundamental package for array computing in Python" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -1790,7 +1726,6 @@ files = [ name = "packaging" version = "23.2" description = "Core utilities for Python packages" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -1802,7 +1737,6 @@ files = [ name = "pandas" version = "1.5.3" description = "Powerful data structures for data analysis, time series, and statistics" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -1838,7 +1772,7 @@ files = [ [package.dependencies] numpy = [ {version = ">=1.20.3", markers = "python_version < \"3.10\""}, - {version = ">=1.21.0", markers = "python_version >= \"3.10\""}, + {version = ">=1.21.0", markers = "python_version >= \"3.10\" and python_version < \"3.11\""}, {version = ">=1.23.2", markers = "python_version >= \"3.11\""}, ] python-dateutil = ">=2.8.1" @@ -1851,7 +1785,6 @@ test = ["hypothesis (>=5.5.3)", "pytest (>=6.0)", "pytest-xdist (>=1.31)"] name = "pandocfilters" version = "1.5.0" description = "Utilities for writing pandoc filters in python" -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -1863,7 +1796,6 @@ files = [ name = "parso" version = "0.8.3" description = "A Python Parser" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -1879,7 +1811,6 @@ testing = ["docopt", "pytest (<6.0.0)"] name = "pdbpp" version = "0.10.3" description = "pdb++, a drop-in replacement for pdb" -category = "dev" optional = false python-versions = "*" files = [ @@ -1900,7 +1831,6 @@ testing = ["funcsigs", "pytest"] name = "pendulum" version = "2.1.2" description = "Python datetimes made easy" -category = "main" optional = true python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -1935,7 +1865,6 @@ pytzdata = ">=2020.1" name = "pexpect" version = "4.8.0" description = "Pexpect allows easy control of interactive console applications." -category = "main" optional = false python-versions = "*" files = [ @@ -1950,7 +1879,6 @@ ptyprocess = ">=0.5" name = "pickleshare" version = "0.7.5" description = "Tiny 'shelve'-like database with concurrency support" -category = "main" optional = false python-versions = "*" files = [ @@ -1962,7 +1890,6 @@ files = [ name = "pillow" version = "10.1.0" description = "Python Imaging Library (Fork)" -category = "main" optional = true python-versions = ">=3.8" files = [ @@ -2030,7 +1957,6 @@ tests = ["check-manifest", "coverage", "defusedxml", "markdown2", "olefile", "pa name = "pineappl" version = "0.6.2" description = "Python bindings to PineAPPL" -category = "main" optional = true python-versions = ">=3.7" files = [ @@ -2069,7 +1995,6 @@ test = ["pytest", "pytest-cov"] name = "pkgutil-resolve-name" version = "1.3.10" description = "Resolve a name to an object." -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -2081,7 +2006,6 @@ files = [ name = "platformdirs" version = "3.11.0" description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2097,7 +2021,6 @@ test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.4)", "pytest-co name = "pluggy" version = "1.3.0" description = "plugin and hook calling mechanisms for python" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -2113,7 +2036,6 @@ testing = ["pytest", "pytest-benchmark"] name = "prompt-toolkit" version = "3.0.39" description = "Library for building powerful interactive command lines in Python" -category = "main" optional = false python-versions = ">=3.7.0" files = [ @@ -2128,7 +2050,6 @@ wcwidth = "*" name = "ptyprocess" version = "0.7.0" description = "Run a subprocess in a pseudo terminal" -category = "main" optional = false python-versions = "*" files = [ @@ -2140,7 +2061,6 @@ files = [ name = "pure-eval" version = "0.2.2" description = "Safely evaluate AST nodes without side effects" -category = "main" optional = false python-versions = "*" files = [ @@ -2155,7 +2075,6 @@ tests = ["pytest"] name = "pybtex" version = "0.24.0" description = "A BibTeX-compatible bibliography processor in Python" -category = "dev" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*" files = [ @@ -2175,7 +2094,6 @@ test = ["pytest"] name = "pybtex-docutils" version = "1.0.3" description = "A docutils backend for pybtex." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2191,7 +2109,6 @@ pybtex = ">=0.16" name = "pycparser" version = "2.21" description = "C parser in Python" -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -2203,7 +2120,6 @@ files = [ name = "pygments" version = "2.16.1" description = "Pygments is a syntax highlighting package written in Python." -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -2218,7 +2134,6 @@ plugins = ["importlib-metadata"] name = "pylint" version = "2.17.7" description = "python code static checker" -category = "dev" optional = false python-versions = ">=3.7.2" files = [ @@ -2248,7 +2163,6 @@ testutils = ["gitpython (>3)"] name = "pyparsing" version = "3.1.1" description = "pyparsing module - Classes and methods to define and execute parsing grammars" -category = "main" optional = true python-versions = ">=3.6.8" files = [ @@ -2263,7 +2177,6 @@ diagrams = ["jinja2", "railroad-diagrams"] name = "pyreadline" version = "2.1" description = "A python implmementation of GNU readline." -category = "dev" optional = false python-versions = "*" files = [ @@ -2274,7 +2187,6 @@ files = [ name = "pyrepl" version = "0.9.0" description = "A library for building flexible command line interfaces" -category = "dev" optional = false python-versions = "*" files = [ @@ -2285,7 +2197,6 @@ files = [ name = "pytest" version = "7.4.3" description = "pytest: simple powerful testing with Python" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2308,7 +2219,6 @@ testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "no name = "pytest-cov" version = "4.1.0" description = "Pytest plugin for measuring coverage." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2327,7 +2237,6 @@ testing = ["fields", "hunter", "process-tests", "pytest-xdist", "six", "virtuale name = "pytest-env" version = "0.6.2" description = "py.test plugin that allows you to add environment variables." -category = "dev" optional = false python-versions = "*" files = [ @@ -2341,7 +2250,6 @@ pytest = ">=2.6.0" name = "python-dateutil" version = "2.8.2" description = "Extensions to the standard Python datetime module" -category = "main" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7" files = [ @@ -2356,7 +2264,6 @@ six = ">=1.5" name = "pytz" version = "2023.3.post1" description = "World timezone definitions, modern and historical" -category = "main" optional = false python-versions = "*" files = [ @@ -2368,7 +2275,6 @@ files = [ name = "pytzdata" version = "2020.1" description = "The Olson timezone database for Python." -category = "main" optional = true python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -2380,7 +2286,6 @@ files = [ name = "pywin32" version = "306" description = "Python for Window Extensions" -category = "dev" optional = false python-versions = "*" files = [ @@ -2404,7 +2309,6 @@ files = [ name = "pyyaml" version = "6.0.1" description = "YAML parser and emitter for Python" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -2464,7 +2368,6 @@ files = [ name = "pyzmq" version = "25.1.1" description = "Python bindings for 0MQ" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -2570,7 +2473,6 @@ cffi = {version = "*", markers = "implementation_name == \"pypy\""} name = "recommonmark" version = "0.7.1" description = "A docutils-compatibility bridge to CommonMark, enabling you to write CommonMark inside of Docutils & Sphinx projects." -category = "dev" optional = false python-versions = "*" files = [ @@ -2587,7 +2489,6 @@ sphinx = ">=1.3.1" name = "referencing" version = "0.30.2" description = "JSON Referencing + Python" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -2603,7 +2504,6 @@ rpds-py = ">=0.7.0" name = "requests" version = "2.31.0" description = "Python HTTP for Humans." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2625,7 +2525,6 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"] name = "rich" version = "12.6.0" description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal" -category = "main" optional = false python-versions = ">=3.6.3,<4.0.0" files = [ @@ -2645,7 +2544,6 @@ jupyter = ["ipywidgets (>=7.5.1,<8.0.0)"] name = "rpds-py" version = "0.12.0" description = "Python bindings to Rust's persistent data structures (rpds)" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -2754,7 +2652,6 @@ files = [ name = "scipy" version = "1.10.1" description = "Fundamental algorithms for scientific computing in Python" -category = "main" optional = false python-versions = "<3.12,>=3.8" files = [ @@ -2793,7 +2690,6 @@ test = ["asv", "gmpy2", "mpmath", "pooch", "pytest", "pytest-cov", "pytest-timeo name = "setuptools" version = "68.2.2" description = "Easily download, build, install, upgrade, and uninstall Python packages" -category = "main" optional = true python-versions = ">=3.8" files = [ @@ -2810,7 +2706,6 @@ testing-integration = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "jar name = "setuptools-scm" version = "8.0.4" description = "the blessed package to manage your versions by scm tags" -category = "main" optional = true python-versions = ">=3.8" files = [ @@ -2833,7 +2728,6 @@ test = ["build", "pytest", "rich", "wheel"] name = "six" version = "1.16.0" description = "Python 2 and 3 compatibility utilities" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*" files = [ @@ -2845,7 +2739,6 @@ files = [ name = "snowballstemmer" version = "2.2.0" description = "This package provides 29 stemmers for 28 languages generated from Snowball algorithms." -category = "dev" optional = false python-versions = "*" files = [ @@ -2857,7 +2750,6 @@ files = [ name = "sortedcontainers" version = "2.4.0" description = "Sorted Containers -- Sorted List, Sorted Dict, Sorted Set" -category = "dev" optional = false python-versions = "*" files = [ @@ -2869,7 +2761,6 @@ files = [ name = "soupsieve" version = "2.5" description = "A modern CSS selector implementation for Beautiful Soup." -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -2881,7 +2772,6 @@ files = [ name = "sphinx" version = "4.5.0" description = "Python documentation generator" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -2917,7 +2807,6 @@ test = ["cython", "html5lib", "pytest", "pytest-cov", "typed-ast"] name = "sphinx-rtd-theme" version = "0.5.2" description = "Read the Docs theme for Sphinx" -category = "dev" optional = false python-versions = "*" files = [ @@ -2936,7 +2825,6 @@ dev = ["bump2version", "sphinxcontrib-httpdomain", "transifex-client"] name = "sphinxcontrib-applehelp" version = "1.0.4" description = "sphinxcontrib-applehelp is a Sphinx extension which outputs Apple help books" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -2952,7 +2840,6 @@ test = ["pytest"] name = "sphinxcontrib-bibtex" version = "2.6.1" description = "Sphinx extension for BibTeX style citations." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -2961,7 +2848,7 @@ files = [ ] [package.dependencies] -docutils = ">=0.8,<0.18.0 || >=0.20.0" +docutils = ">=0.8,<0.18.dev0 || >=0.20.dev0" importlib-metadata = {version = ">=3.6", markers = "python_version < \"3.10\""} pybtex = ">=0.24" pybtex-docutils = ">=1.0.0" @@ -2971,7 +2858,6 @@ Sphinx = ">=3.5" name = "sphinxcontrib-details-directive" version = "0.1.0" description = "\"details\" directive for Sphinx" -category = "dev" optional = false python-versions = "*" files = [ @@ -2989,7 +2875,6 @@ test = ["flake8", "flake8-import-order", "mypy", "pytest", "tox"] name = "sphinxcontrib-devhelp" version = "1.0.2" description = "sphinxcontrib-devhelp is a sphinx extension which outputs Devhelp document." -category = "dev" optional = false python-versions = ">=3.5" files = [ @@ -3005,7 +2890,6 @@ test = ["pytest"] name = "sphinxcontrib-htmlhelp" version = "2.0.1" description = "sphinxcontrib-htmlhelp is a sphinx extension which renders HTML help files" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -3021,7 +2905,6 @@ test = ["html5lib", "pytest"] name = "sphinxcontrib-jsmath" version = "1.0.1" description = "A sphinx extension which renders display math in HTML via JavaScript" -category = "dev" optional = false python-versions = ">=3.5" files = [ @@ -3036,7 +2919,6 @@ test = ["flake8", "mypy", "pytest"] name = "sphinxcontrib-qthelp" version = "1.0.3" description = "sphinxcontrib-qthelp is a sphinx extension which outputs QtHelp document." -category = "dev" optional = false python-versions = ">=3.5" files = [ @@ -3052,7 +2934,6 @@ test = ["pytest"] name = "sphinxcontrib-serializinghtml" version = "1.1.5" description = "sphinxcontrib-serializinghtml is a sphinx extension which outputs \"serialized\" HTML files (json and pickle)." -category = "dev" optional = false python-versions = ">=3.5" files = [ @@ -3068,7 +2949,6 @@ test = ["pytest"] name = "sqlalchemy" version = "1.4.50" description = "Database Abstraction Library" -category = "main" optional = true python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7" files = [ @@ -3100,7 +2980,7 @@ files = [ ] [package.dependencies] -greenlet = {version = "!=0.4.17", markers = "python_version >= \"3\" and platform_machine == \"aarch64\" or python_version >= \"3\" and platform_machine == \"ppc64le\" or python_version >= \"3\" and platform_machine == \"x86_64\" or python_version >= \"3\" and platform_machine == \"amd64\" or python_version >= \"3\" and platform_machine == \"AMD64\" or python_version >= \"3\" and platform_machine == \"win32\" or python_version >= \"3\" and platform_machine == \"WIN32\""} +greenlet = {version = "!=0.4.17", markers = "python_version >= \"3\" and (platform_machine == \"aarch64\" or platform_machine == \"ppc64le\" or platform_machine == \"x86_64\" or platform_machine == \"amd64\" or platform_machine == \"AMD64\" or platform_machine == \"win32\" or platform_machine == \"WIN32\")"} [package.extras] aiomysql = ["aiomysql (>=0.2.0)", "greenlet (!=0.4.17)"] @@ -3127,7 +3007,6 @@ sqlcipher = ["sqlcipher3-binary"] name = "stack-data" version = "0.6.3" description = "Extract data from python stack frames and tracebacks for informative displays" -category = "main" optional = false python-versions = "*" files = [ @@ -3147,7 +3026,6 @@ tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"] name = "tinycss2" version = "1.2.1" description = "A tiny CSS parser" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -3166,7 +3044,6 @@ test = ["flake8", "isort", "pytest"] name = "tomli" version = "2.0.1" description = "A lil' TOML parser" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3178,7 +3055,6 @@ files = [ name = "tomlkit" version = "0.12.2" description = "Style preserving TOML library" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -3190,7 +3066,6 @@ files = [ name = "tornado" version = "6.3.3" description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed." -category = "dev" optional = false python-versions = ">= 3.8" files = [ @@ -3211,7 +3086,6 @@ files = [ name = "traitlets" version = "5.13.0" description = "Traitlets Python configuration system" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -3227,7 +3101,6 @@ test = ["argcomplete (>=3.0.3)", "mypy (>=1.6.0)", "pre-commit", "pytest (>=7.0, name = "typing-extensions" version = "4.8.0" description = "Backported and Experimental Type Hints for Python 3.8+" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -3239,7 +3112,6 @@ files = [ name = "urllib3" version = "2.0.7" description = "HTTP library with thread-safe connection pooling, file post, and more." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -3257,7 +3129,6 @@ zstd = ["zstandard (>=0.18.0)"] name = "wcwidth" version = "0.2.9" description = "Measures the displayed width of unicode strings in a terminal" -category = "main" optional = false python-versions = "*" files = [ @@ -3269,7 +3140,6 @@ files = [ name = "webencodings" version = "0.5.1" description = "Character encoding aliases for legacy web content" -category = "dev" optional = false python-versions = "*" files = [ @@ -3281,7 +3151,6 @@ files = [ name = "wmctrl" version = "0.5" description = "A tool to programmatically control windows inside X" -category = "dev" optional = false python-versions = ">=2.7" files = [ @@ -3299,7 +3168,6 @@ test = ["pytest"] name = "wrapt" version = "1.15.0" description = "Module for decorators, wrappers and monkey patching." -category = "dev" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7" files = [ @@ -3384,7 +3252,6 @@ files = [ name = "zipp" version = "3.17.0" description = "Backport of pathlib-compatible object wrapper for zip files" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -3398,10 +3265,9 @@ testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "p [extras] box = ["pineappl"] -docs = [] mark = ["banana-hep", "sqlalchemy"] [metadata] lock-version = "2.0" python-versions = ">=3.8,<3.12" -content-hash = "4dd730ff39df843badbc23b58969c934a767d51160bf1a64b44b2dc3fa077d7b" +content-hash = "46074655c5eeca7190f3a7ccb9c3d06599aa3fb9ab690cedcb2dc2bfc4f24d6f" From 6bbe6fc110e80932ddf4113beb566b9dce77906c Mon Sep 17 00:00:00 2001 From: Alessandro Candido Date: Sun, 5 Nov 2023 16:06:59 +0100 Subject: [PATCH 6/7] Add poethepoet package to nix dev shell --- flake.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/flake.nix b/flake.nix index d7222bce3..14e087467 100644 --- a/flake.nix +++ b/flake.nix @@ -33,7 +33,7 @@ inherit inputs pkgs; modules = [ { - packages = with pkgs; [pre-commit]; + packages = with pkgs; [pre-commit poethepoet]; languages.python = { enable = true; From 7c4e774b6abdb9b388cd037bca18b17c60616c71 Mon Sep 17 00:00:00 2001 From: Alessandro Candido Date: Sat, 4 Nov 2023 11:29:29 +0100 Subject: [PATCH 7/7] Trim gitignore --- .gitignore | 128 ----------------------------------------------------- 1 file changed, 128 deletions(-) diff --git a/.gitignore b/.gitignore index 4fe810a31..7f0158b30 100644 --- a/.gitignore +++ b/.gitignore @@ -9,158 +9,30 @@ __pycache__/ *.so # Distribution / packaging -.Python build/ -develop-eggs/ -dist/ -downloads/ -eggs/ -.eggs/ -lib/ -lib64/ -parts/ -sdist/ -var/ -wheels/ *.egg-info/ -.installed.cfg *.egg -MANIFEST - -# PyInstaller -# Usually these files are written by a python script from a template -# before PyInstaller builds the exe, so as to inject date/other infos into it. -*.manifest -*.spec - -# Installer logs -pip-log.txt -pip-delete-this-directory.txt # Unit test / coverage reports htmlcov/ -.tox/ .coverage .coverage.* .cache -nosetests.xml coverage.xml -*.cover .hypothesis/ .pytest_cache/ -# Translations -*.mo -*.pot - -# Django stuff: -*.log -local_settings.py -db.sqlite3 - -# Flask stuff: -instance/ -.webassets-cache - -# Scrapy stuff: -.scrapy - # Sphinx documentation docs/_build/ -# PyBuilder -target/ - # Jupyter Notebook .ipynb_checkpoints -# pyenv -.python-version - -# celery beat schedule file -celerybeat-schedule - -# SageMath parsed files -*.sage.py - # Environments -.env -.venv env/ venv/ -ENV/ -env.bak/ -venv.bak/ - -# Spyder project settings -.spyderproject -.spyproject - -# editors -.vscode -.vim - -# Rope project settings -.ropeproject - -# mkdocs documentation -/site # mypy .mypy_cache/ -########### -# gh-pages -########### - -# Ignore metadata generated by Jekyll -_site/ -.sass-cache/ -.jekyll-cache/ -.jekyll-metadata - -# Ignore folders generated by Bundler -.bundle/ -vendor/ - -# Ignore docs files -_gh_pages -.ruby-version - -# Numerous always-ignore extensions -*.diff -*.err -*.orig -*.log -*.rej -*.swo -*.swp -*.zip -*.vi -*~ - -# OS or Editor folders -.DS_Store -._* -Thumbs.db -.cache -.project -.settings -.tmproj -*.esproj -nbproject -*.sublime-project -*.sublime-workspace -.idea - -# Komodo -*.komodoproject -.komodotools - -# grunt-html-validation -validation-status.json -validation-report.json - -# Folders to ignore -node_modules .devenv