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CSV ngly1: colocalizes{ \space|_ }with and contributes{ \space|_ }to #1

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NuriaQueralt opened this issue Dec 6, 2018 · 0 comments

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@NuriaQueralt
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NuriaQueralt commented Dec 6, 2018

These edges come from Monarch and sometimes have a space and sometimes an underscore, e.g colocalizes with or colocalizes_with. This makes problems to convert into URI, e.g. Krusty::wd_to_neo4j.py only translates into URI if there is a space. Update the library to fix that:

  • normalize all edge_label into "space"
  • normalize all edge_type from label to CURIE using the correct RO_ID

#3

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