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Keep a fixed parcellation when computing templates #86

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pbarbarant opened this issue Sep 25, 2024 · 1 comment
Open

Keep a fixed parcellation when computing templates #86

pbarbarant opened this issue Sep 25, 2024 · 1 comment
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@pbarbarant
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_align_images_to_template instantiates a bunch of PairwiseAlignment estimators, each of which generate their own parcellation of the data. I would argue that a single parcellation should be computed once when instantiating the template for the following reasons:

  1. Obvious speed gains;
  2. The whole dataset could be used to derive more precise regions (especially for ward and kmeans), rather than working with pairs of subjects;
  3. Better control when fitting the template.

Best,
PL

@bthirion
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Fully agree with that.
We've spent too much time on pairwise alignments ...

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