diff --git a/.Rhistory b/.Rhistory index 1254db4..8be861e 100644 --- a/.Rhistory +++ b/.Rhistory @@ -4,3 +4,5 @@ renv::init() renv::restore() renv::restore renv::restore() +renv::restore() +renv::restore() diff --git a/index.html b/index.html new file mode 100644 index 0000000..40ac94c --- /dev/null +++ b/index.html @@ -0,0 +1,1303 @@ + + + + + + + + + + + + + +index.knit + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
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+R/Medicine Webinar: Visualizing Survival Data with the {ggsurvfit} R +Package +

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+ + + + + + + + + + + + + + + diff --git a/news/events.html b/news/events.html new file mode 100644 index 0000000..41ba0e7 --- /dev/null +++ b/news/events.html @@ -0,0 +1,1219 @@ + + + + + + + + + + + + + +Events + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
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Upcoming Events

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+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
TitleStart DateEnd DateLocationType
EARL2024-09-042024-09-05BrightonConference
Shiny in Production2024-10-092024-10-10Newcastle upon TyneConference
IFoA Life Conference 20242024-10-142024-10-16ManchesterConference
Government & Public Sector R Conference2024-10-292024-10-30Washington D.C.Conference
+
+
+
+

Recently Completed Events

+
+
df <- data.frame(Title = c(
+    '<a href="https://www.r-project.org/conferences/" target="_blank" rel="noreferrer noopener">useR! 2024</a>', 
+    '<a href="https://posit.co/conference/" target="_blank" rel="noreferrer noopener">posit::conf 2024</a>', 
+    'Henrick Bengtsson invited to speak at the Swiss Re Conference', 
+    '<a href="https://cascadiarconf.com/" target="_blank" rel="noreferrer noopener">Cascadia R Conference</a>',
+    '<a href="https://www.rstats.nyc/" target="_blank" rel="noreferrer noopener">New York R Conference</a>',
+    '<a href="https://www.rinfinance.com/" target="_blank" rel="noreferrer noopener">R/Finance 2024</a>',
+    '<a href="https://satrday-london-2024.jumpingrivers.com/" target="_blank" rel="noreferrer noopener">SatRdays London 2024</a>',
+    '<a href="https://www.r-consortium.org/r-medicine-quarto-for-reproducible-medical-manuscripts" target="_blank" rel="noreferrer noopener">R/Medicine: Quarto for Reproducible Medical Manuscripts</a>',
+    '<a href="https://www.r-consortium.org/new-webinar-tidy-finance-and-accessing-financial-data" target="_blank" rel="noreferrer noopener">New Webinar: Tidy Finance and Accessing Financial Data</a>',
+    '<a href="https://www.r-consortium.org/escape-the-data-dungeon-unlock-scalable-r-analytics-and-ml" target="_blank" rel="noreferrer noopener">Escape the Data Dungeon: Unlock Scalable R Analytics and ML</a>',
+    '<a href="https://www.r-consortium.org/from-vision-to-action-the-r-pfizer-r-center-of-excellence-led-journey-to-r-adoption" target="_blank" rel="noreferrer noopener">From Vision to Action: The Pfizer R Center of Excellence-led journey to R Adoption</a>',
+    '<a href="https://www.r-consortium.org/r-insurance-series-for-everyone-in-insurance-or-actuarial-science" target="_blank" rel="noreferrer noopener">R/Insurance Series: High performance programming in R</a>',
+    '<a href="https://www.r-consortium.org/r-insurance-series-for-everyone-in-insurance-or-actuarial-science" target="_blank" rel="noreferrer noopener">Dan Sjoberg presenting on Plotting Survival with {ggsurvfit}</a>',
+    '<a href="https://www.r-consortium.org/r-insurance-series-for-everyone-in-insurance-or-actuarial-science" target="_blank" rel="noreferrer noopener">R/Insurance Series:&nbsp;R performance culture</a>',
+    '<a href="https://www.r-consortium.org/r-insurance-series-for-everyone-in-insurance-or-actuarial-science" target="_blank" rel="noreferrer noopener">R/Insurance Series: From programming in R to putting R into production</a>',
+    '<a href="https://www.r-consortium.org/r-insurance-series-for-everyone-in-insurance-or-actuarial-science" target="_blank" rel="noreferrer noopener">R/Insurance Series:&nbsp;From Excel to Programming in R</a>',
+    '<a href="https://www.r-consortium.org/r-adoption-series-the-adoption-of-r-in-japans-pharma-industry-confirmation" target="_blank" rel="noreferrer noopener">The use of R in Japan’s Pharma Industry</a>'
+
+    ),
+
+    Dates = c(
+        'July 8-11, 2024', 
+        'August 12-14, 2024', 
+        'June 25, 2024 – 7:00 AM ET',
+        'June 21-22, 2024',
+        'May 16-17, 2024',
+        'May 17-18, 2024',
+        'April 27, 2024',
+        'March 20, 2024',
+        'March 6, 2024',
+        'February 27, 2024',
+        'February 8, 2024',
+        'January 31, 2024',
+        'January 25, 2024',
+        'January 24, 2024',
+        'January 17, 2024',
+        'January 10, 2024',
+        'January 8, 2024'
+      
+        ),
+
+    Location = c(
+        'Salzburg, Austria',
+        'Seattle, WA, USA', 
+        'Virtual',
+        'Seattle, WA, USA',
+        'New York City, NY, USA',
+        'Chicago, IL, USA',
+        'London, UK',
+        'Virtual',
+        'Virtual',
+        'Virtual',
+        'Virtual',
+        'Virtual',
+        'Virtual',
+        'Virtual',
+        'Virtual',
+        'Virtual',
+        'Virtual'
+
+        ),
+    Type = c('Conference', 'Conference', 'Conference', 'Conference', 'Conference', 'Conference',
+    'Conference', 'Conference', 'Webinar', 'Webinar', 'Webinar', 'Webinar', 'Webinar', 'Webinar',
+    'Webinar', 'Webinar', 'Webinar'))
+#view data frame
+knitr::kable(df[1:17,], )
+ ++++++ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
TitleDatesLocationType
useR! +2024July 8-11, 2024Salzburg, AustriaConference
posit::conf +2024August 12-14, 2024Seattle, WA, USAConference
Henrick Bengtsson invited to speak at the Swiss Re +ConferenceJune 25, 2024 – 7:00 AM ETVirtualConference
Cascadia +R ConferenceJune 21-22, 2024Seattle, WA, USAConference
New +York R ConferenceMay 16-17, 2024New York City, NY, USAConference
R/Finance +2024May 17-18, 2024Chicago, IL, USAConference
SatRdays +London 2024April 27, 2024London, UKConference
R/Medicine: +Quarto for Reproducible Medical ManuscriptsMarch 20, 2024VirtualConference
New +Webinar: Tidy Finance and Accessing Financial DataMarch 6, 2024VirtualWebinar
Escape +the Data Dungeon: Unlock Scalable R Analytics and MLFebruary 27, 2024VirtualWebinar
From +Vision to Action: The Pfizer R Center of Excellence-led journey to R +AdoptionFebruary 8, 2024VirtualWebinar
R/Insurance +Series: High performance programming in RJanuary 31, 2024VirtualWebinar
Dan +Sjoberg presenting on Plotting Survival with {ggsurvfit}January 25, 2024VirtualWebinar
R/Insurance +Series: R performance cultureJanuary 24, 2024VirtualWebinar
R/Insurance +Series: From programming in R to putting R into productionJanuary 17, 2024VirtualWebinar
R/Insurance +Series: From Excel to Programming in RJanuary 10, 2024VirtualWebinar
The +use of R in Japan’s Pharma IndustryJanuary 8, 2024VirtualWebinar
+
+
+

Archived Webinars

+
+

R +and shiny in regulatory submission +– December, 11 2023 • Virtual

+

This series was a collaborative effort by the R consortium, PhUSE, +and PSI. The FDA and industry speakers shared their unique experiences +with R-based and shiny-based submissions.

+

PHUSE +EU Connect 2023 – Nov 5 – 8, 2023 • Birmingham, UK

+

The PHUSE EU Connect 2023 was a key event for professionals in +healthcare data science.

+

R/Pharma – Oct +24 – 26, 2023 • Virtual

+

The R/Pharma conference in 2023 was a specialized event focusing on +the use of R in pharmaceutical development.

+

R government – +October 19 – 20, 2023 • Washington DC

+

The 2023 Government & Public Sector R Conference was an event +dedicated to exploring the use of the R programming language in +government and public sector contexts. It featured a diverse lineup of +speakers and workshops, focusing on various applications of R, including +data analysis, machine learning, and policy research. The conference +provided a platform for professionals and enthusiasts to share insights, +innovations, and experiences in applying R in governmental and public +sector projects.

+

LatinR 2023 – +October 18 – 20, 2023 • Montevideo, Uruguay

+

LatinR 2023 was a Latin American conference focusing on the use of +the R programming language in research and development.

+

Shiny in +Production – October 12 – 13, 2023 • Newcastle, UK

+

The “Shiny in Production” conference, which took place in Newcastle +Upon Tyne, UK, was centered around the application of Shiny and other +web-based R packages. It attracted a diverse group of participants, +ranging from experienced Shiny users to novices.

+

BioC +Europe – September 20 – 22, 2023 • Heidelberg, Germany

+

The European Bioconductor Conference 2023 is centered on new +developments in the Bioconductor project and related fields of +bioinformatics and computational biology. It includes workshops and +keynote presentations for knowledge sharing and collaboration.

+

Posit:conf – +September 17 – 20, 2023 • Chicago, IL

+

Posit::conf (2023) was two days of workshops and two days of +conference keynotes and talks, with endless opportunities to connect +with the data science community.

+

R +Validation Hub Community Meeting – June 27, 2023 • +Virtual

+

Last year, the R validation hub initiated a three-part presentation +series on “case studies.” Eight pharma companies presented their +implementation of the risk assessment framework. We briefly summarize +common themes and differences in the approaches. For the majority of the +meeting, we want to discuss common challenges and brainstorm ideas for +possible future projects by the R Validation Hub.

+

R/Medicine +2023 Virtual Conference – June 5-9, 2023 • Virtual

+

The R/Medicine conference provides a forum for sharing R based tools +and approaches used to analyze and gain insights from health data.

+

SatRday – Hosted By Jumping Rivers – April 22, 2023 +• Hosted at King’s College London, UK

+

Hosted at King’s College, UK, this one-day event will feature talks +on all things R! SatRdays events are for everyone with an interest in R, +whether you’re a seasoned pro or just getting started. Learn More

+

R/Adoption +Series: Learnings and Reflection from R Validation Case +Studies – March 30, 2023 • Virtual

+

The R Validation Hub will review the implementation of risk-based +approaches to assess R package accuracy within a validated +infrastructure and present our learnings from applied case studies. The +discussion reflects the thinking of the R Validation Hub working group, +which is a cross-industry initiative funded by the R Consortium.

+

Teal: +An R-Shiny Framework to Unlock the Power of Interactive Data +Exploration – Feb 23, 2023 • Virtual

+

Teal is an open-source framework for building interactive data +exploration applications in R. Developed at Roche, Teal allows users to +quickly and easily create dynamic visualizations and tabulations of +their data. It provides a range of pre-built, customizable modules and +enables users to interact with their data in real time. This allows +users to quickly and easily explore their data, thus enabling fast +insights generation.

+

{MMRM} +and Software Engineering Working Group – Jan 26, 2023 • +Virtual

+

In this R Adoption Series Webinar, the R Consortium invites the ASA +Software Engineering Working Group ASA BIOP SWE to share their +experience of how the group formed and the types of problems they are +trying to solve in the Open Source for the Pharmaceutical industry.

+

Using R at +Scale on Database Data – December 8, 2022 • Virtual

+

In this webinar, Mark and Sherry present on how to increase overall +solution performance with R tightly integrated with +Oracle databases.

+

A +Survey of Changes around the Tidyverse Package in R – +October 28, 2022 • Virtual

+

The Osun RUG, Nigeria hosts “A Survey of Changes around the Tidyverse +Package in R” with special guest, Chief Scientist at RStudio, Hadley +Wickham. The core tidyverse includes the packages that is likely used in +everyday data analyses.

+

Upskilling +on Data Handling and Communication at Swiss Re – October +27, 2022 • Virtual

+

In this session, Swiss Re team members shared their approach to +upskilling for data analytics before diving into an example of how to +create automated (and stunning) actuarial reports. More Information

+

Using +Metadata for Speedy Delivery – September 29, 2022 • +Virtual

+

In this R Adoption Series Webinar, the R Consortium invited two +Pharmaceutical organizations to share their experience in leveraging +metadata for automation pieces of the clinical delivery workflow. More Information

+

R/Medicine +Conference 2022! – August 23 – 26, 2022 • Virtual

+

Announcing R/Medicine +2022! The conference was fully virtual from August 23 through 26 and +featured two days of workshops (included with the low registration fee!) +and two days of keynotes featuring JJ Allaire and Frank Harrell. Check +out the R Consortium +Youtube to view the talks!

+

Rstudio::conf +2022 – July 25-28, 2022 • Washington DC

+

A conference to connect, learn and celebrate all things R and +RStudio! Sharpen your skills and celebrate the R Community together with +an array of workshops and an inspiring lineup of speakers.

+

userR! +2022  – June 20 – 23, 2022 • Virtual

+

Now in its 18th year is the official conference of the R Project for +Statistical Computing. Keynotes include Sebastian Meyer, Amanda Cox, +Julia Silge, Mine Dogucu and will showcase the afrimapr project +supports the development of a community of practice in Africa around +map-making in R

+

R Conference – June 8-10, New York

+

A conference that gathers data scientists and data professionals to +explore, share, and inspire ideas, and to promote the growth of open +source ideals

+

IDEA, The R Consortium working group on Inclusion, Diversity, +Equity, and Accessibility – June 4 

+

Will be holding francophone satRdays event. More information should +be available on the R +Consortium Blog shortly

+

R/ Finance – June 3-4, Chicago

+

One of the longest-running R conferences is the primary meeting for +academics and Quants using R for finance. This single-track event is the +place to talk time series, stochastic modeling, and meet some legendary +R developers.

+

R Adoption Series: Reporting Table Creation In R: Meeting +Specific Needs With a General Framework – Apr 28, 8-9:30am PDT +/ 11am-12:30pm EDT / 4-5:30pm BST

+

Gabriel Becker, Scientist in the Bioinformatics and Computational +Biology department at Genentech Research.

+

Gabe will present the rtables package in three contexts. First, he +will briefly present the package itself and how it can be used to create +reporting tables, including those suitable for regulatory submissions. +He will then discuss where rtables fits in the larger process of +filing-table creation within Roche. Finally, he will pivot to discussing +what contributed to rtables’ success as a general framework intended to +meet specific needs and what lessons those in Industry can draw from its +development. 

+

Register here or see the webinar home +page for details.

+
+ + + + +
+ + + + + + + + + + + + + + + diff --git a/quarto-blog-dev.Rproj b/quarto-blog-dev.Rproj.orig similarity index 100% rename from quarto-blog-dev.Rproj rename to quarto-blog-dev.Rproj.orig diff --git a/readme_assets/linux_setup/README.md b/readme_assets/linux_setup/README.md index 83a4d89..2016afc 100644 --- a/readme_assets/linux_setup/README.md +++ b/readme_assets/linux_setup/README.md @@ -55,3 +55,40 @@ sudo pacman -U rstudio-desktop-2024.04.2.764-1-x86_64.pkg.tar.zst ![R Studio Start](r-studio-start.png) ![install renv](install-renv.png) + +restore package with renv + +```text + +> renv::restore() +The following package(s) will be updated: + +# CRAN ----------------------------------------------------------------------- +- base64enc [* -> 0.1-3] +- bigD [* -> 0.2.0] +``` + +![renv restore prompt](renv_restore_prompt.png) + +## v8 install + +![v8 error](v8_error.png) + +```text +export DOWNLOAD_STATIC_LIBV8=1 +[craig@archmini quarto-blog-dev]$ rstudio . +``` + +At this point, the v8 installed. + +![v8 installed](v8_install.png) + +possible alternative + + + +## everything works + +gt table now works. + +![gt_table](gt_table.png) diff --git a/readme_assets/linux_setup/gt_table.png b/readme_assets/linux_setup/gt_table.png new file mode 100644 index 0000000..501d7bb Binary files /dev/null and b/readme_assets/linux_setup/gt_table.png differ diff --git a/readme_assets/linux_setup/renv_restore_prompt.png b/readme_assets/linux_setup/renv_restore_prompt.png new file mode 100644 index 0000000..b00376d Binary files /dev/null and b/readme_assets/linux_setup/renv_restore_prompt.png differ diff --git a/readme_assets/linux_setup/v8_error.png b/readme_assets/linux_setup/v8_error.png new file mode 100644 index 0000000..ef0e793 Binary files /dev/null and b/readme_assets/linux_setup/v8_error.png differ diff --git a/readme_assets/linux_setup/v8_install.png b/readme_assets/linux_setup/v8_install.png new file mode 100644 index 0000000..a808c43 Binary files /dev/null and b/readme_assets/linux_setup/v8_install.png differ