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DESCRIPTION
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DESCRIPTION
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Package: nDSPA
Type: Package
Title: nDSPA
Version: 0.1.2
Authors@R:
c(person("Riyue", "Bao", email = "[email protected]", role = c("aut", "cph")),
person("Rajesh","Acharya", email = "[email protected]", role=c("ctb","cre")),
person("Rohit", "Satyam", email="[email protected]", role=c("ctb")))
Description: An R package for quality metrics, preprocessing, visualization, and differential testing analysis of spatial omics data.
Depends:
R (>= 3.6),
SingleCellExperiment,
SummarizedExperiment
License: CC0
Encoding: UTF-8
LazyData: true
Imports:
magrittr (>= 2.0.1),
dplyr (>= 1.0.7),
rlang (>= 0.4.11),
readxl (>= 1.3.1),
readr (>= 2.0.0),
tools (>= 4.1.0),
methods (>= 4.1.0),
tibble (>= 3.1.2),
lmerTest (>= 3.1.3),
plotly (>= 4.9.4.1),
ggplot2 (>= 3.3.5),
factoextra (>= 1.0.7),
shiny (>= 1.6.0),
shinythemes (>= 1.2.0),
stats (>= 4.1.0),
heatmaply (>= 1.2.1),
multcomp (>= 1.4.17),
lme4 (>= 1.1.27.1),
GGally (>= 2.1.2),
tidyr (>= 1.1.3),
purrr (>= 0.3.4),
M3C,
S4Vectors
biocViews: M3C, SummarizedExperiment, SingleCellExperiment,
S4Vectors
RoxygenNote: 7.1.1
vignetteBuilder: knitr
Suggests:
rmarkdown,
knitr,
BiocStyle
VignetteBuilder: knitr