From 7ff1fe9f456f83bf9bd27bfd5c6084d4bb7eebef Mon Sep 17 00:00:00 2001 From: Adam Taylor Date: Tue, 3 Oct 2023 14:54:51 -0700 Subject: [PATCH 1/3] Update test.config --- conf/test.config | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/conf/test.config b/conf/test.config index 7408bd7..3cbd3f5 100644 --- a/conf/test.config +++ b/conf/test.config @@ -20,6 +20,6 @@ params { max_time = '6.h' // Input data - input = 'data/test_samplesheet.csv' + input = '${projectDir}/data/test_samplesheet.csv' -} \ No newline at end of file +} From bae11df5a85c5b88976f7c2ae6fa10f2e5d52c15 Mon Sep 17 00:00:00 2001 From: Adam Taylor Date: Tue, 3 Oct 2023 15:54:19 -0700 Subject: [PATCH 2/3] Update test.config --- conf/test.config | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/conf/test.config b/conf/test.config index 3cbd3f5..d924b6a 100644 --- a/conf/test.config +++ b/conf/test.config @@ -20,6 +20,6 @@ params { max_time = '6.h' // Input data - input = '${projectDir}/data/test_samplesheet.csv' + input = '$projectDir/data/test_samplesheet.csv' } From 30995fb35a5efb46665e2a907c5ee7c5e5657783 Mon Sep 17 00:00:00 2001 From: Adam Taylor Date: Tue, 3 Oct 2023 16:02:28 -0700 Subject: [PATCH 3/3] Update test.config to use url to samplesheet --- conf/test.config | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/conf/test.config b/conf/test.config index d924b6a..5d4f81f 100644 --- a/conf/test.config +++ b/conf/test.config @@ -20,6 +20,6 @@ params { max_time = '6.h' // Input data - input = '$projectDir/data/test_samplesheet.csv' + input = 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/nf-artist/main/data/test_samplesheet.csv' }