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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(QC_boxplot)
export(check_mv)
export(filter_annotations_massdataset)
export(find_noise)
export(getVolumes_win)
export(get_compound_info)
export(get_kegg_pathway_ont)
export(load_depends_metminer)
export(merge_mass_dataset_fix)
export(ms2_plot_mass_dataset_mz)
export(pca_plot)
export(pie_plot)
export(pie_plot_plotly)
export(rsd_plot)
export(run_metMiner)
import(MDAtoolkits)
import(ggplot2)
import(massdataset)
import(metid)
import(shiny)
importFrom(ComplexHeatmap,Heatmap)
importFrom(ComplexHeatmap,HeatmapAnnotation)
importFrom(ComplexHeatmap,UpSet)
importFrom(ComplexHeatmap,anno_barplot)
importFrom(ComplexHeatmap,anno_text)
importFrom(ComplexHeatmap,comb_degree)
importFrom(ComplexHeatmap,comb_size)
importFrom(ComplexHeatmap,draw)
importFrom(ComplexHeatmap,make_comb_mat)
importFrom(ComplexHeatmap,max_text_width)
importFrom(ComplexHeatmap,rowAnnotation)
importFrom(ComplexHeatmap,set_name)
importFrom(ComplexHeatmap,set_size)
importFrom(DT,JS)
importFrom(DT,dataTableOutput)
importFrom(DT,datatable)
importFrom(DT,renderDataTable)
importFrom(PCAtools,biplot)
importFrom(PCAtools,pca)
importFrom(PCAtools,plotloadings)
importFrom(RCurl,getURL)
importFrom(bsicons,bs_icon)
importFrom(circlize,colorRamp2)
importFrom(clusterProfiler,enricher)
importFrom(dashboardthemes,shinyDashboardLogoDIY)
importFrom(dplyr,across)
importFrom(dplyr,all_of)
importFrom(dplyr,anti_join)
importFrom(dplyr,arrange)
importFrom(dplyr,case_when)
importFrom(dplyr,contains)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,inner_join)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_if)
importFrom(dplyr,n)
importFrom(dplyr,pull)
importFrom(dplyr,rename)
importFrom(dplyr,right_join)
importFrom(dplyr,select)
importFrom(dplyr,slice_head)
importFrom(dplyr,summarise)
importFrom(dplyr,ungroup)
importFrom(dplyr,where)
importFrom(enrichplot,dotplot)
importFrom(ggforce,geom_arc_bar)
importFrom(ggplot2,aes)
importFrom(ggplot2,annotate)
importFrom(ggplot2,coord_polar)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_abline)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_boxplot)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_label)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,labs)
importFrom(ggplot2,position_stack)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_size_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,theme_void)
importFrom(ggplot2,xlab)
importFrom(ggplot2,xlim)
importFrom(ggplot2,ylab)
importFrom(ggplot2,ylim)
importFrom(ggrepel,geom_text_repel)
importFrom(ggsci,scale_color_aaas)
importFrom(ggstatsplot,ggbetweenstats)
importFrom(golem,activate_js)
importFrom(golem,add_css_file)
importFrom(golem,add_resource_path)
importFrom(golem,bundle_resources)
importFrom(golem,favicon)
importFrom(golem,use_external_css_file)
importFrom(golem,with_golem_options)
importFrom(grDevices,jpeg)
importFrom(grid,gpar)
importFrom(magrittr,"%>%")
importFrom(masscleaner,detect_outlier)
importFrom(masscleaner,extract_outlier_table)
importFrom(masscleaner,impute_mv)
importFrom(masscleaner,integrate_data)
importFrom(masscleaner,normalize_data)
importFrom(massdataset,activate_mass_dataset)
importFrom(massdataset,create_mass_dataset)
importFrom(massdataset,export_mass_dataset4metdna)
importFrom(massdataset,export_ms2_data)
importFrom(massdataset,extract_annotation_table)
importFrom(massdataset,extract_expression_data)
importFrom(massdataset,extract_ms2_data)
importFrom(massdataset,extract_sample_info)
importFrom(massdataset,extract_variable_info)
importFrom(massdataset,mutate_ms2)
importFrom(massdataset,mutate_variable_na_freq)
importFrom(massdataset,show_sample_missing_values)
importFrom(massprocesser,process_data)
importFrom(metid,annotate_metabolites_mass_dataset)
importFrom(plotly,add_trace)
importFrom(plotly,event_data)
importFrom(plotly,event_register)
importFrom(plotly,ggplotly)
importFrom(plotly,layout)
importFrom(plotly,plot_ly)
importFrom(plotly,plotlyOutput)
importFrom(plotly,renderPlotly)
importFrom(purrr,map)
importFrom(purrr,map_chr)
importFrom(purrr,map_dfr)
importFrom(purrr,walk)
importFrom(ropls,plot)
importFrom(shiny,shinyApp)
importFrom(shiny,tags)
importFrom(shinyFiles,getVolumes)
importFrom(shinyFiles,parseDirPath)
importFrom(shinyFiles,parseFilePaths)
importFrom(shinyFiles,shinyDirButton)
importFrom(shinyFiles,shinyDirChoose)
importFrom(shinyFiles,shinyFileChoose)
importFrom(shinyFiles,shinyFilesButton)
importFrom(shinyWidgets,materialSwitch)
importFrom(shinyjqui,jqui_resizable)
importFrom(shinyjs,runjs)
importFrom(shinyjs,toggle)
importFrom(shinyjs,useShinyjs)
importFrom(shinythemes,shinytheme)
importFrom(stringr,regex)
importFrom(stringr,str_detect)
importFrom(stringr,str_extract)
importFrom(stringr,str_extract_all)
importFrom(stringr,str_pad)
importFrom(stringr,str_remove)
importFrom(stringr,str_replace)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_split)
importFrom(stringr,str_to_lower)
importFrom(tibble,as_tibble)
importFrom(tibble,column_to_rownames)
importFrom(tibble,rownames_to_column)
importFrom(tidyr,drop_na)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,separate_longer_delim)
importFrom(writexl,write_xlsx)