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ADViSEBioassay

Lifecycle: experimental

The goal of ADViSEBioassay is to …

Installation

ADViSEBioassay is a stand-alone application implemented using the R language (R > 4.0) and the Shiny libraries. It can be installed as any other R package on several operating systems (Windows, macOS and Linux). Before installing the package you have to perform few supplementary steps based on your operating systems:

  • Windows (tested on Windows 10 64bit) 

Before installing the package you need also to install Rtools from the following link:

https://cran.r-project.org/bin/windows/Rtools.

  • MacOS
    If you are on MacOs run the following codes in the console:
brew install imagemagick@6
brew install cairo
  • Ubuntu (tested on 18.04).

If you are on Ubuntu run the following codes in the console:

sudo apt install build-essential libcurl4-gnutls-dev libxml2-dev libssl-dev
sudo apt-get install libcairo2-dev
sudo apt-get install libxt-dev
sudo apt install libmagick++-dev
sudo apt-get install libc6
sudo apt-get install libnlopt-dev

After that, open RStudio, check if you have already installed the {devtools} package and run the following code:

devtools::install_github("ShinyFabio/ADViSEBioassay")

Be careful that if you need to install many packages and you decide to use compilation, the process could take a lot depending on your hardware and operating system.

Usage

Once the installation is completed, run:

library("ADViSEBioassay")
run_ADViSEBioassay()

Funding

…ADViSE