diff --git a/submission.yaml b/submission.yaml index af8ba45b2..8b1378917 100644 --- a/submission.yaml +++ b/submission.yaml @@ -1,1255 +1 @@ -- directed: true - graph: - drug: Tenofovir disoproxil - drugbank: DB:DB00300 - drug_mesh: NULL - disease: Human immunodeficiency virus infection - disease_mesh: MESH:D015658 - links: - - key: increases abundance of - source: DB:DB00300 - target: MESH:D000068698 - - key: has metabolite - source: MESH:D000068698 - target: MESH:C583447 - - key: decreases activity of - source: MESH:C583447 - target: UniProt:Q72547 - - key: negatively regulates - source: UniProt:Q72547 - target: GO:0006351 - - key: in taxon - source: GO:0006351 - target: NCBITaxon:12721 - - key: causes - source: NCBITaxon:12721 - target: MESH:D015658 - multigraph: true - nodes: - - id: DB:DB00300 - label: Drug - name: Tenofovir disoproxil - - id: MESH:D000068698 - label: Drug - name: tenofovir - - id: MESH:C583447 - label: ChemicalSubstance - name: tenofovir diphosphate - - id: UniProt:Q72547 - label: Protein - name: HIV-1 reverse transcriptase - - id: GO:0006351 - label: BiologicalProcess - name: DNA transcription - - id: NCBITaxon:12721 - label: OrganismTaxon - name: Human immunodeficiency virus - - id: MESH:D015658 - label: Disease - name: Human immunodeficiency virus infection - reference: https://go.drugbank.com/drugs/DB00300#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Tenofovir-disoproxil#section=MeSH-Pharmacological-Classification https://en.wikipedia.org/wiki/Tenofovir_disoproxil -- directed: true - graph: - drug: Tenofovir disoproxil - drugbank: DB:DB00300 - drug_mesh: NULL - disease: Chronic type B viral hepatitis - disease_mesh: MESH:D019694 - links: - - key: increases abundance of - source: DB:DB00300 - target: MESH:D000068698 - - key: has metabolite - source: MESH:D000068698 - target: MESH:C583447 - - key: decreases activity of - source: MESH:C583447 - target: UniProt:P24024 - - key: negatively regulates - source: UniProt:P24024 - target: GO:0006260 - - key: in taxon - source: GO:0006260 - target: NCBITaxon:10407 - - key: causes - source: NCBITaxon:10407 - target: MESH:D019694 - multigraph: true - nodes: - - id: DB:DB00300 - label: Drug - name: Tenofovir disoproxil - - id: MESH:D000068698 - label: Drug - name: tenofovir - - id: MESH:C583447 - label: ChemicalSubstance - name: tenofovir diphosphate - - id: UniProt:P24024 - label: Protein - name: Hepatitis B polymerase - - id: GO:0006260 - label: BiologicalProcess - name: DNA replication - - id: NCBITaxon:10407 - label: OrganismTaxon - name: Hepatitis B virus - - id: MESH:D019694 - label: Disease - name: Chronic type B viral hepatitis - reference: https://go.drugbank.com/drugs/DB00300#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Tenofovir-disoproxil#section=MeSH-Pharmacological-Classification https://en.wikipedia.org/wiki/Tenofovir_disoproxil -- directed: true - graph: - drug: Sinecatechins - drugbank: DB:DB01266 - drug_mesh: NULL - disease: Condyloma acuminatum - disease_mesh: MESH:D003218 - links: - - key: decreases activity of - source: DB:DB01266 - target: UniProt:P19838 - - key: positively regulates - source: UniProt:P19838 - target: GO:1900119 - - key: decreases activity of - source: DB:DB01266 - target: InterPro:IPR001245 - - key: positively regulates - source: InterPro:IPR001245 - target: GO:1900119 - - key: increases activity of - source: DB:DB01266 - target: UniProt:P04637 - - key: positively regulates - source: UniProt:P04637 - target: GO:1900119 - - key: increases activity of - source: DB:DB01266 - target: UniProt:P06400 - - key: positively regulates - source: UniProt:P06400 - target: GO:1900119 - - key: decreases activity of - source: DB:DB01266 - target: InterPro:IPR000837 - - key: positively regulates - source: InterPro:IPR000837 - target: GO:1900119 - - key: decreases activity of - source: DB:DB01266 - target: InterPro:IPR003545 - - key: positively regulates - source: InterPro:IPR003545 - target: GO:1900119 - - key: decreases activity of - source: DB:DB01266 - target: UniProt:P03129 - - key: positively regulates - source: UniProt:P03129 - target: GO:1900119 - - key: in taxon - source: GO:1900119 - target: NCBITaxon:10566 - - key: causes - source: NCBITaxon:10566 - target: MESH:D003218 - multigraph: true - nodes: - - id: DB:DB01266 - label: Drug - name: Sinecatechins - - id: UniProt:P19838 - label: Protein - name: Transcription factor NF-κB - - id: InterPro:IPR001245 - label: GeneFamily - name: receptor tyrosine kinase - - id: UniProt:P04637 - label: Protein - name: tumor suppressor gene p53 - - id: InterPro:IPR000837 - label: GeneFamily - name: Transcription factor Activator protein-1 - - id: InterPro:IPR003545 - label: GeneFamily - name: telomerase - - id: UniProt:P06400 - label: Protein - name: tumor suppressor gene pRb - - id: GO:1900119 - label: BiologicalProcess - name: apoptosis - - id: UniProt:P03129 - label: Protein - name: HPV-E7 gene expression - - id: NCBITaxon:10566 - label: OrganismTaxon - name: Human papillomavirus - - id: MESH:D003218 - label: Disease - name: Condyloma acuminatum - reference: https://go.drugbank.com/drugs/DB01266#mechanismofaction https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4066610/ doi:10.4103/2589-0557.132415 -- directed: true - graph: - drug: Baricitinib - drugbank: DB:DB11817 - drug_mesh: MESH:C000596027 - disease: Rheumatoid arthritis - disease_mesh: MESH:D001172 - links: - - key: decreases activity of - source: MESH:C000596027 - target: UniProt:P23458 - - key: decreases activity of - source: MESH:C000596027 - target: UniProt:O60674 - - key: decreases activity of - source: MESH:C000596027 - target: UniProt:P52333 - - key: decreases activity of - source: MESH:C000596027 - target: UniProt:Q14289 - - key: positively regulates - source: UniProt:P23458 - target: InterPro:IPR001217 - - key: positively regulates - source: UniProt:O60674 - target: InterPro:IPR001217 - - key: positively regulates - source: UniProt:P52333 - target: InterPro:IPR001217 - - key: positively regulates - source: UniProt:Q14289 - target: InterPro:IPR001217 - - key: decreases abundance of - source: InterPro:IPR001217 - target: MESH:D016207 - - key: prevents - source: MESH:D016207 - target: GO:0006954 - - key: contributes to - source: GO:0006954 - target: MESH:D001172 - multigraph: true - nodes: - - id: MESH:C000596027 - label: Drug - name: Baricitinib - - id: UniProt:P23458 - label: Protein - name: Janus kinase 1 - - id: UniProt:O60674 - label: Protein - name: Janus kinase 2 - - id: UniProt:P52333 - label: Protein - name: Janus kinase 3 - - id: UniProt:Q14289 - label: Protein - name: Tyrosine Kinase 2 - - id: InterPro:IPR001217 - label: GeneFamily - name: signal transducers and activators of transcription (STATs) - - id: MESH:D016207 - label: ChemicalSubstance - name: inflammatory cytokines - - id: GO:0006954 - label: BiologicalProcess - name: inflammatory response - - id: MESH:D001172 - label: Disease - name: Rheumatoid arthritis - reference: https://go.drugbank.com/drugs/DB11817#mechanismofaction - -- directed: true - graph: - drug: Fimasartan - drugbank: DB:DB09279 - drug_mesh: MESH:C558933 - disease: Hypertensive disorder - disease_mesh: MESH:D006973 - links: - - key: increases activity of - source: MESH:C558933 - target: InterPro:IPR001004 - - key: positively regulates - source: InterPro:IPR001004 - target: GO:0048243 - - key: decreases activity of - source: MESH:C558933 - target: UniProt:P30556 - - key: positively regulates - source: UniProt:P30556 - target: GO:0048243 - - key: decreases activity of - source: GO:0048243 - target: GO:0042310 - - key: decreases secretion of - source: MESH:C558933 - target: MESH:D000450 - - key: increases response to - source: MESH:D000450 - target: GO:0035819 - - key: decreases activity of - source: GO:0035819 - target: HP:0011104 - - key: negatively regulates - source: GO:0042310 - target: HP:0011104 - - key: negatively regulates - source: HP:0011104 - target: GO:0045776 - - key: correlated with - source: GO:0045776 - target: MESH:D006973 - multigraph: true - nodes: - - id: MESH:C558933 - label: Drug - name: Fimasartan - - id: InterPro:IPR001004 - label: GeneFamily - name: α1-adrenergic receptors - - id: UniProt:P30556 - label: Protein - name: Angiotensin II receptor type 1 - - id: GO:0048243 - label: BiologicalProcess - name: noradrenaline release - - id: GO:0042310 - label: BiologicalProcess - name: vasoconstriction - - id: MESH:D000450 - label: ChemicalSubstance - name: aldosterone - - id: GO:0035819 - label: BiologicalProcess - name: natriuresis - - id: HP:0011104 - label: PhenotypicFeature - name: blood volume - - id: GO:0045776 - label: BiologicalProcess - name: blood pressure - - id: MESH:D006973 - label: Disease - name: Hypertensive disorder - reference: https://go.drugbank.com/drugs/DB09279#mechanismofaction https://en.wikipedia.org/wiki/Fimasartan#:~:text=Fimasartan%20is%20a%20non%2Dpeptide,of%20hypertension%20and%20heart%20failure. -- directed: true - graph: - drug: Budesonide - drugbank: DB:DB01222 - drug_mesh: MESH:D019819 - disease: Crohn's disease - disease_mesh: MESH:D003424 - links: - - key: molecularly interacts with - source: MESH:D019819 - target: UniProt:P04150 - - key: negatively regulates - source: UniProt:P04150 - target: REACT:R-HSA-177662 - - key: prevents - source: REACT:R-HSA-177662 - target: GO:0006954 - - key: correlated with - source: GO:0006954 - target: MESH:D003424 - multigraph: true - nodes: - - id: MESH:D019819 - label: Drug - name: Budesonide - - id: UniProt:P04150 - label: Protein - name: glucocorticoid receptor - - id: REACT:R-HSA-177662 - label: Pathway - name: NF-Kappa B pathway - - id: GO:0006954 - label: BiologicalProcess - name: inflammation - - id: MESH:D003424 - label: Disease - name: Crohn's disease - reference: https://go.drugbank.com/drugs/DB01222#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Budesonide#section=Pharmacology doi:10.1165/rcmb.2016-0068OC -- directed: true - graph: - drug: Budesonide - drugbank: DB:DB01222 - drug_mesh: MESH:D019819 - disease: Asthma - disease_mesh: MESH:D001249 - links: - - key: molecularly interacts with - source: MESH:D019819 - target: UniProt:P04150 - - key: negatively regulates - source: UniProt:P04150 - target: REACT:R-HSA-177662 - - key: prevents - source: REACT:R-HSA-177662 - target: GO:0006954 - - key: correlated with - source: GO:0006954 - target: MESH:D001249 - multigraph: true - nodes: - - id: MESH:D019819 - label: Drug - name: Budesonide - - id: UniProt:P04150 - label: Protein - name: glucocorticoid receptor - - id: REACT:R-HSA-177662 - label: Pathway - name: NF-Kappa B pathway - - id: GO:0006954 - label: BiologicalProcess - name: inflammation - - id: MESH:D001249 - label: Disease - name: Asthma - reference: https://go.drugbank.com/drugs/DB01222#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Budesonide#section=Pharmacology doi:10.1165/rcmb.2016-0068OC -- directed: true - graph: - drug: Budesonide - drugbank: DB:DB01222 - drug_mesh: MESH:D019819 - disease: Allergic rhinitis - disease_mesh: MESH:D065631 - links: - - key: molecularly interacts with - source: MESH:D019819 - target: UniProt:P04150 - - key: negatively regulates - source: UniProt:P04150 - target: REACT:R-HSA-177662 - - key: prevents - source: REACT:R-HSA-177662 - target: GO:0006954 - - key: correlated with - source: GO:0006954 - target: MESH:D065631 - multigraph: true - nodes: - - id: MESH:D019819 - label: Drug - name: Budesonide - - id: UniProt:P04150 - label: Protein - name: glucocorticoid receptor - - id: REACT:R-HSA-177662 - label: Pathway - name: NF-Kappa B pathway - - id: GO:0006954 - label: BiologicalProcess - name: inflammation - - id: MESH:D065631 - label: Disease - name: Allergic rhinitis - reference: https://go.drugbank.com/drugs/DB01222#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Budesonide#section=Pharmacology doi:10.1165/rcmb.2016-0068OC -- directed: true - graph: - drug: Budesonide - drugbank: DB:DB01222 - drug_mesh: MESH:D019819 - disease: Crohn's disease - disease_mesh: MESH:D003424 - links: - - key: molecularly interacts with - source: MESH:D019819 - target: UniProt:P04150 - - key: increases abundance of - source: UniProt:P04150 - target: UniProt:P04083 - - key: decreases activity of - source: UniProt:P04083 - target: InterPro:IPR001211 - - key: increases abundance of - source: UniProt:P04150 - target: UniProt:P22301 - - key: decreases activity of - source: UniProt:P22301 - target: InterPro:IPR001211 - - key: prevents - source: InterPro:IPR001211 - target: GO:0050482 - - key: negatively regulates - source: GO:0050482 - target: GO:0019370 - - key: prevents - source: GO:0019370 - target: GO:0006954 - - key: negatively regulates - source: GO:0050482 - target: GO:0001516 - - key: prevents - source: GO:0001516 - target: GO:0006954 - - key: correlated with - source: GO:0006954 - target: MESH:D003424 - multigraph: true - nodes: - - id: MESH:D019819 - label: Drug - name: Budesonide - - id: UniProt:P04150 - label: Protein - name: glucocorticoid receptor - - id: UniProt:P04083 - label: Protein - name: Annexin A1 - - id: UniProt:P22301 - label: Protein - name: Interleukin 10 - - id: GO:0019370 - label: Protein - name: leukotriene synthesis - - id: InterPro:IPR001211 - label: GeneFamily - name: phospholipase A2 - - id: GO:0050482 - label: BiologicalProcess - name: arachidonic acid release - - id: GO:0001516 - label: BiologicalProcess - name: prostaglandin synthesis - - id: GO:0006954 - label: BiologicalProcess - name: inflammation - - id: MESH:D003424 - label: Disease - name: Crohn's disease - reference: https://go.drugbank.com/drugs/DB01222#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Budesonide#section=Pharmacology doi:10.1165/rcmb.2016-0068OC -- directed: true - graph: - drug: Budesonide - drugbank: DB:DB01222 - drug_mesh: MESH:D019819 - disease: Asthma - disease_mesh: MESH:D001249 - links: - - key: molecularly interacts with - source: MESH:D019819 - target: UniProt:P04150 - - key: increases abundance of - source: UniProt:P04150 - target: UniProt:P04083 - - key: decreases activity of - source: UniProt:P04083 - target: InterPro:IPR001211 - - key: increases abundance of - source: UniProt:P04150 - target: UniProt:P22301 - - key: decreases activity of - source: UniProt:P22301 - target: InterPro:IPR001211 - - key: prevents - source: InterPro:IPR001211 - target: GO:0050482 - - key: negatively regulates - source: GO:0050482 - target: GO:0019370 - - key: prevents - source: GO:0019370 - target: GO:0006954 - - key: negatively regulates - source: GO:0050482 - target: GO:0001516 - - key: prevents - source: GO:0001516 - target: GO:0006954 - - key: correlated with - source: GO:0006954 - target: MESH:D001249 - multigraph: true - nodes: - - id: MESH:D019819 - label: Drug - name: Budesonide - - id: UniProt:P04150 - label: Protein - name: glucocorticoid receptor - - id: UniProt:P04083 - label: Protein - name: Annexin A1 - - id: UniProt:P22301 - label: Protein - name: Interleukin 10 - - id: GO:0019370 - label: Protein - name: leukotriene synthesis - - id: InterPro:IPR001211 - label: GeneFamily - name: phospholipase A2 - - id: GO:0050482 - label: BiologicalProcess - name: arachidonic acid release - - id: GO:0001516 - label: BiologicalProcess - name: prostaglandin synthesis - - id: GO:0006954 - label: BiologicalProcess - name: inflammation - - id: MESH:D001249 - label: Disease - name: Asthma - reference: https://go.drugbank.com/drugs/DB01222#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Budesonide#section=Pharmacology doi:10.1165/rcmb.2016-0068OC -- directed: true - graph: - drug: Budesonide - drugbank: DB:DB01222 - drug_mesh: MESH:D019819 - disease: Allergic rhinitis - disease_mesh: MESH:D065631 - links: - - key: molecularly interacts with - source: MESH:D019819 - target: UniProt:P04150 - - key: increases abundance of - source: UniProt:P04150 - target: UniProt:P04083 - - key: decreases activity of - source: UniProt:P04083 - target: InterPro:IPR001211 - - key: increases abundance of - source: UniProt:P04150 - target: UniProt:P22301 - - key: decreases activity of - source: UniProt:P22301 - target: InterPro:IPR001211 - - key: prevents - source: InterPro:IPR001211 - target: GO:0050482 - - key: negatively regulates - source: GO:0050482 - target: GO:0019370 - - key: prevents - source: GO:0019370 - target: GO:0006954 - - key: negatively regulates - source: GO:0050482 - target: GO:0001516 - - key: prevents - source: GO:0001516 - target: GO:0006954 - - key: correlated with - source: GO:0006954 - target: MESH:D065631 - multigraph: true - nodes: - - id: MESH:D019819 - label: Drug - name: Budesonide - - id: UniProt:P04150 - label: Protein - name: glucocorticoid receptor - - id: UniProt:P04083 - label: Protein - name: Annexin A1 - - id: UniProt:P22301 - label: Protein - name: Interleukin 10 - - id: GO:0019370 - label: Protein - name: leukotriene synthesis - - id: InterPro:IPR001211 - label: GeneFamily - name: phospholipase A2 - - id: GO:0050482 - label: BiologicalProcess - name: arachidonic acid release - - id: GO:0001516 - label: BiologicalProcess - name: prostaglandin synthesis - - id: GO:0006954 - label: BiologicalProcess - name: inflammation - - id: MESH:D065631 - label: Disease - name: Allergic rhinitis - reference: https://go.drugbank.com/drugs/DB01222#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Budesonide#section=Pharmacology doi:10.1165/rcmb.2016-0068OC -- directed: true - graph: - drug: Calcium carbonate - drugbank: DB:DB06724 - drug_mesh: MESH:D002119 - disease: Hypocalcemia - disease_mesh: MESH:D006996 - links: - - key: increases abundance of - source: MESH:D002119 - target: MESH:D002118 - - key: contributes to - source: MESH:D002118 - target: MESH:D006996 - multigraph: true - nodes: - - id: MESH:D002119 - label: Drug - name: Calcium carbonate - - id: MESH:D002118 - label: ChemicalSubstance - name: Calcium - - id: MESH:D006996 - label: Disease - name: Hypocalcemia - reference: https://go.drugbank.com/drugs/DB06724#mechanismofaction -- directed: true - graph: - drug: Calcium carbonate - drugbank: DB:DB06724 - drug_mesh: MESH:D002119 - disease: Indigestion - disease_mesh: MESH:D004415 - links: - - key: decreases activity of - source: MESH:D002119 - target: InterPro:IPR034162 - - key: prevents - source: InterPro:IPR034162 - target: GO:0046717 - - key: decreases activity of - source: MESH:D002119 - target: GO:0009268 - - key: prevents - source: GO:0009268 - target: GO:0046717 - - key: decreases activity of - source: MESH:D002119 - target: GO:0032310 - - key: prevents - source: GO:0032310 - target: GO:0046717 - - key: decreases activity of - source: MESH:D002119 - target: InterPro:IPR034162 - - key: prevents - source: InterPro:IPR034162 - target: GO:0046717 - - key: causes - source: GO:0046717 - target: MESH:D004415 - multigraph: true - nodes: - - id: MESH:D002119 - label: Drug - name: Calcium carbonate - - id: InterPro:IPR034162 - label: GeneFamily - name: Pepsin - - id: GO:0009268 - label: BiologicalProcess - name: Response to pH - - id: GO:0032310 - label: BiologicalProcess - name: Prostaglandin secretion - - id: GO:0046717 - label: BiologicalProcess - name: Acid secretion - - id: MESH:D004415 - label: Disease - name: Indigestion - reference: https://go.drugbank.com/drugs/DB06724#mechanismofaction -- directed: true - graph: - drug: Cefprozil - drugbank: DB:DB01150 - drug_mesh: MESH:C052018 - disease: Bronchitis - disease_mesh: MESH:D001991 - links: - - key: increases activity of - source: MESH:C052018 - target: UniProt:Q04707 - - key: negatively regulates - source: UniProt:Q04707 - target: GO:0042546 - - key: increases activity of - source: MESH:C052018 - target: InterPro:IPR033907 - - key: contributes to - source: InterPro:IPR033907 - target: GO:0008219 - - key: negatively regulates - source: MESH:C052018 - target: GO:0018104 - - key: contributes to - source: GO:0018104 - target: GO:0008219 - - key: in taxon - source: GO:0042546 - target: NCBITaxon:1313 - - key: in taxon - source: GO:0008219 - target: NCBITaxon:1313 - - key: causes - source: NCBITaxon:1313 - target: MESH:D001991 - multigraph: true - nodes: - - id: MESH:C052018 - label: Drug - name: Cefprozil - - id: UniProt:Q04707 - label: Protein - name: penicillin-binding proteins - - id: InterPro:IPR033907 - label: GeneFamily - name: Autolysins - - id: GO:0018104 - label: BiologicalProcess - name: Peptidoglycan-protein cross-linking - - id: GO:0042546 - label: BiologicalProcess - name: Cell wall biogenesis - - id: GO:0008219 - label: BiologicalProcess - name: Cell death - - id: NCBITaxon:1313 - label: OrganismTaxon - name: Streptococcus pneumoniae - - id: MESH:D001991 - label: Disease - name: Bronchitis - reference: https://go.drugbank.com/drugs/DB01150#mechanismofaction http://www.antimicrobe.org/drugpopup/Cefprozil.htm -- directed: true - graph: - drug: Cefprozil - drugbank: DB:DB01150 - drug_mesh: MESH:C052018 - disease: Upper respiratory infection - disease_mesh: MESH:D012141 - links: - - key: increases activity of - source: MESH:C052018 - target: UniProt:P45299 - - key: negatively regulates - source: UniProt:P45299 - target: GO:0042546 - - key: increases activity of - source: MESH:C052018 - target: InterPro:IPR033907 - - key: contributes to - source: InterPro:IPR033907 - target: GO:0008219 - - key: negatively regulates - source: MESH:C052018 - target: GO:0018104 - - key: contributes to - source: GO:0018104 - target: GO:0008219 - - key: in taxon - source: GO:0042546 - target: NCBITaxon:727 - - key: in taxon - source: GO:0008219 - target: NCBITaxon:727 - - key: causes - source: NCBITaxon:727 - target: MESH:D012141 - multigraph: true - nodes: - - id: MESH:C052018 - label: Drug - name: Cefprozil - - id: UniProt:P45299 - label: Protein - name: penicillin-binding proteins - - id: InterPro:IPR033907 - label: GeneFamily - name: Autolysins - - id: GO:0018104 - label: BiologicalProcess - name: Peptidoglycan-protein cross-linking - - id: GO:0042546 - label: BiologicalProcess - name: Cell wall biogenesis - - id: GO:0008219 - label: BiologicalProcess - name: Cell death - - id: NCBITaxon:727 - label: OrganismTaxon - name: Haemophilus influenzae - - id: MESH:D012141 - label: Disease - name: Upper respiratory infection - reference: https://go.drugbank.com/drugs/DB01150#mechanismofaction http://www.antimicrobe.org/drugpopup/Cefprozil.htm -- directed: true - graph: - drug: Cefprozil - drugbank: DB:DB01150 - drug_mesh: MESH:C052018 - disease: Streptococcus pyogenes infection - disease_mesh: MESH:D013290 - links: - - key: increases activity of - source: MESH:C052018 - target: InterPro:IPR001460 - - key: negatively regulates - source: InterPro:IPR001460 - target: GO:0042546 - - key: increases activity of - source: MESH:C052018 - target: InterPro:IPR033907 - - key: contributes to - source: InterPro:IPR033907 - target: GO:0008219 - - key: negatively regulates - source: MESH:C052018 - target: GO:0018104 - - key: contributes to - source: GO:0018104 - target: GO:0008219 - - key: in taxon - source: GO:0042546 - target: NCBITaxon:1314 - - key: in taxon - source: GO:0008219 - target: NCBITaxon:1314 - - key: causes - source: NCBITaxon:1314 - target: MESH:D013290 - multigraph: true - nodes: - - id: MESH:C052018 - label: Drug - name: Cefprozil - - id: InterPro:IPR001460 - label: GeneFamily - name: penicillin-binding proteins - - id: InterPro:IPR033907 - label: GeneFamily - name: Autolysins - - id: GO:0018104 - label: BiologicalProcess - name: Peptidoglycan-protein cross-linking - - id: GO:0042546 - label: BiologicalProcess - name: Cell wall biogenesis - - id: GO:0008219 - label: BiologicalProcess - name: Cell death - - id: NCBITaxon:1314 - label: OrganismTaxon - name: Streptococcus pyogenes - - id: MESH:D013290 - label: Disease - name: Streptococcus pyogenes infection - reference: https://go.drugbank.com/drugs/DB01150#mechanismofaction http://www.antimicrobe.org/drugpopup/Cefprozil.htm -- directed: true - graph: - drug: Cefprozil - drugbank: DB:DB01150 - drug_mesh: MESH:C052018 - disease: Tonsillitis - disease_mesh: MESH:D014069 - links: - - key: increases activity of - source: MESH:C052018 - target: InterPro:IPR001460 - - key: negatively regulates - source: InterPro:IPR001460 - target: GO:0042546 - - key: increases activity of - source: MESH:C052018 - target: InterPro:IPR033907 - - key: contributes to - source: InterPro:IPR033907 - target: GO:0008219 - - key: negatively regulates - source: MESH:C052018 - target: GO:0018104 - - key: contributes to - source: GO:0018104 - target: GO:0008219 - - key: in taxon - source: GO:0042546 - target: NCBITaxon:1314 - - key: in taxon - source: GO:0008219 - target: NCBITaxon:1314 - - key: causes - source: NCBITaxon:1314 - target: MESH:D014069 - multigraph: true - nodes: - - id: MESH:C052018 - label: Drug - name: Cefprozil - - id: InterPro:IPR001460 - label: GeneFamily - name: penicillin-binding proteins - - id: InterPro:IPR033907 - label: GeneFamily - name: Autolysins - - id: GO:0018104 - label: BiologicalProcess - name: Peptidoglycan-protein cross-linking - - id: GO:0042546 - label: BiologicalProcess - name: Cell wall biogenesis - - id: GO:0008219 - label: BiologicalProcess - name: Cell death - - id: NCBITaxon:1314 - label: OrganismTaxon - name: Streptococcus pyogenes - - id: MESH:D014069 - label: Disease - name: Tonsillitis - reference: https://go.drugbank.com/drugs/DB01150#mechanismofaction http://www.antimicrobe.org/drugpopup/Cefprozil.htm -- directed: true - graph: - drug: Cefprozil - drugbank: DB:DB01150 - drug_mesh: MESH:C052018 - disease: Infection due to Staphylococcus aureus - disease_mesh: MESH:D013203 - links: - - key: increases activity of - source: MESH:C052018 - target: UniProt:Q53613 - - key: negatively regulates - source: UniProt:Q53613 - target: GO:0042546 - - key: increases activity of - source: MESH:C052018 - target: InterPro:IPR033907 - - key: contributes to - source: InterPro:IPR033907 - target: GO:0008219 - - key: negatively regulates - source: MESH:C052018 - target: GO:0018104 - - key: contributes to - source: GO:0018104 - target: GO:0008219 - - key: in taxon - source: GO:0042546 - target: NCBITaxon:1280 - - key: in taxon - source: GO:0008219 - target: NCBITaxon:1280 - - key: causes - source: NCBITaxon:1280 - target: MESH:D013203 - multigraph: true - nodes: - - id: MESH:C052018 - label: Drug - name: Cefprozil - - id: UniProt:Q53613 - label: Protein - name: penicillin-binding proteins - - id: InterPro:IPR033907 - label: GeneFamily - name: Autolysins - - id: GO:0018104 - label: BiologicalProcess - name: Peptidoglycan-protein cross-linking - - id: GO:0042546 - label: BiologicalProcess - name: Cell wall biogenesis - - id: GO:0008219 - label: BiologicalProcess - name: Cell death - - id: NCBITaxon:1280 - label: OrganismTaxon - name: Staphylococcus aureus - - id: MESH:D013203 - label: Disease - name: Infection due to Staphylococcus aureus - reference: https://go.drugbank.com/drugs/DB01150#mechanismofaction http://www.antimicrobe.org/drugpopup/Cefprozil.htm -- directed: true - graph: - drug: Citalopram - drugbank: DB:DB00215 - drug_mesh: MESH:D015283 - disease: Depressive disorder - disease_mesh: MESH:D003866 - links: - - key: decreases activity of - source: MESH:D015283 - target: UniProt:P31645 - - key: negatively regulates - source: UniProt:P31645 - target: GO:0051610 - - key: located in - source: GO:0051610 - target: GO:0043083 - - key: correlated with - source: GO:0043083 - target: MESH:D003866 - multigraph: true - nodes: - - id: MESH:D015283 - label: Drug - name: Citalopram - - id: UniProt:P31645 - label: Protein - name: Solute carrier family 6 member 4, SLC6A4 - - id: GO:0051610 - label: BiologicalProcess - name: Serotonin uptake - - id: GO:0043083 - label: CellularComponent - name: Synaptic cleft - - id: MESH:D003866 - label: Disease - name: Depressive disorder - reference: https://go.drugbank.com/drugs/DB00215#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Citalopram#section=Pharmacology-and-Biochemistry -- directed: true - graph: - drug: Citalopram - drugbank: DB:DB00215 - drug_mesh: MESH:D015283 - disease: Major depressive disorder - disease_mesh: MESH:D003865 - links: - - key: decreases activity of - source: MESH:D015283 - target: UniProt:P31645 - - key: negatively regulates - source: UniProt:P31645 - target: GO:0051610 - - key: located in - source: GO:0051610 - target: GO:0043083 - - key: correlated with - source: GO:0043083 - target: MESH:D003865 - multigraph: true - nodes: - - id: MESH:D015283 - label: Drug - name: Citalopram - - id: UniProt:P31645 - label: Protein - name: Solute carrier family 6 member 4, SLC6A4 - - id: GO:0051610 - label: BiologicalProcess - name: Serotonin uptake - - id: GO:0043083 - label: CellularComponent - name: Synaptic cleft - - id: MESH:D003865 - label: Disease - name: Major depressive disorder - reference: https://go.drugbank.com/drugs/DB00215#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Citalopram#section=Pharmacology-and-Biochemistry - -- directed: true - graph: - drug: Nisoldipine - drugbank: DB:DB00401 - drug_mesh: MESH:D015737 - disease: Hypertensive disorder - disease_mesh: MESH:D006973 - links: - - key: decreases activity of - source: MESH:D015737 - target: InterPro:IPR031649 - - key: decreases abundance of - source: InterPro:IPR031649 - target: MESH:D002118 - - key: negatively regulates - source: MESH:D002118 - target: GO:0006939 - - key: causes - source: GO:0006939 - target: GO:0042311 - - key: prevents - source: GO:0042311 - target: MESH:D006973 - multigraph: true - nodes: - - id: MESH:D015737 - label: Drug - name: Nisoldipine - - id: InterPro:IPR031649 - label: GeneFamily - name: L-type calcium channels - - id: MESH:D002118 - label: ChemicalSubstance - name: Calcium - - id: GO:0006939 - label: BiologicalProcess - name: Smooth muscle contraction - - id: GO:0042311 - label: BiologicalProcess - name: Vasodilation - - id: MESH:D006973 - label: Disease - name: Hypertensive disorder - reference: https://go.drugbank.com/drugs/DB00401#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Nisoldipine#section=Pharmacology-and-Biochemistry -- directed: true - graph: - drug: Paliperidone - drugbank: DB:DB01267 - drug_mesh: NULL - disease: Schizoaffective disorder - disease_mesh: MESH:D011618 - links: - - key: decreases activity of - source: DB:DB01267 - target: UniProt:P35348 - - key: positively regulates - source: UniProt:P35348 - target: REACT:R-HSA-162582 - - key: decreases activity of - source: DB:DB01267 - target: UniProt:P08913 - - key: positively regulates - source: UniProt:P08913 - target: REACT:R-HSA-162582 - - key: decreases activity of - source: DB:DB01267 - target: UniProt:P35367 - - key: positively regulates - source: UniProt:P35367 - target: REACT:R-HSA-162582 - - key: decreases activity of - source: DB:DB01267 - target: UniProt:P28223 - - key: positively regulates - source: UniProt:P28223 - target: REACT:R-HSA-162582 - - key: decreases activity of - source: DB:DB01267 - target: UniProt:P14416 - - key: positively regulates - source: UniProt:P14416 - target: REACT:R-HSA-162582 - - key: correlated with - source: REACT:R-HSA-162582 - target: MESH:D011618 - multigraph: true - nodes: - - id: DB:DB01267 - label: Drug - name: Paliperidone - - id: UniProt:P35348 - label: Protein - name: Alpha 1 adrenergic receptor - - id: UniProt:P08913 - label: Protein - name: Alpha 2 adrenergic receptor - - id: UniProt:P35367 - label: Protein - name: Histamine H1 receptor - - id: UniProt:P28223 - label: Protein - name: 5-hydroxytryptamine receptor 2A - - id: UniProt:P14416 - label: Protein - name: D(2) dopamine receptor - - id: REACT:R-HSA-162582 - label: Pathway - name: Signal transduction - - id: MESH:D011618 - label: Disease - name: Schizoaffective disorder - reference: https://go.drugbank.com/drugs/DB01267#mechanismofaction https://pubchem.ncbi.nlm.nih.gov/compound/Paliperidone +