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pyproject.toml
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pyproject.toml
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[project]
name = "napari-activelearning"
dynamic = ["version"]
description = "An active learning plugin for fine tuning of deep learning models."
readme = "README.md"
license = {file = "LICENSE"}
authors = [
{name = "Fernando Cervantes (The Jackson Laboratory)"},
{email = "[email protected]"},
]
classifiers = [
"Development Status :: 2 - Pre-Alpha",
"Framework :: napari",
"Intended Audience :: Developers",
"License :: OSI Approved :: MIT License",
"Operating System :: OS Independent",
"Programming Language :: Python",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3 :: Only",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Topic :: Scientific/Engineering :: Image Processing",
]
requires-python = ">=3.10"
dependencies = [
"napari",
"numpy",
"dask[array]",
"magicgui",
"qtpy",
"scikit-image",
"tensorstore==0.1.59",
"ome-zarr==0.9.0",
"zarr",
"zarrdataset>=0.2.0",
]
[project.optional-dependencies]
cellpose = [
"cellpose>=3.0.0"
]
testing = [
"tox",
"pytest", # https://docs.pytest.org/en/latest/contents.html
"pytest-cov", # https://pytest-cov.readthedocs.io/en/latest/
"pytest-qt", # https://pytest-qt.readthedocs.io/en/latest/
"napari",
"pyqt5",
]
[project.entry-points."napari.manifest"]
napari-activelearning = "napari_activelearning:napari.yaml"
[project.urls]
Homepage = "https://github.com/TheJacksonLaboratory/activelearning"
[build-system]
requires = ["setuptools>=42.0.0", "setuptools_scm"]
build-backend = "setuptools.build_meta"
[tool.setuptools]
include-package-data = true
[tool.setuptools.packages.find]
where = ["src"]
[tool.setuptools.package-data]
"*" = ["*.yaml"]
[tool.setuptools_scm]
write_to = "src/napari_activelearning/_version.py"
[tool.black]
line-length = 79
target-version = ['py310']
[tool.ruff]
line-length = 79
lint.select = [
"E", "F", "W", #flake8
"UP", # pyupgrade
"I", # isort
"BLE", # flake8-blind-exception
"B", # flake8-bugbear
"A", # flake8-builtins
"C4", # flake8-comprehensions
"ISC", # flake8-implicit-str-concat
"G", # flake8-logging-format
"PIE", # flake8-pie
"SIM", # flake8-simplify
]
lint.ignore = [
"E501", # line too long. let black handle this
"UP006", "UP007", # type annotation. As using magicgui require runtime type annotation then we disable this.
"SIM117", # flake8-simplify - some of merged with statements are not looking great with black, reanble after drop python 3.9
]
exclude = [
".bzr",
".direnv",
".eggs",
".git",
".mypy_cache",
".pants.d",
".ruff_cache",
".svn",
".tox",
".venv",
"__pypackages__",
"_build",
"buck-out",
"build",
"dist",
"node_modules",
"venv",
"*vendored*",
"*_vendor*",
]
target-version = "py310"
fix = true