From 9ad2d42233fed3cf028097c3481d1fa34173ab72 Mon Sep 17 00:00:00 2001
From: Mike Lloyd <Mike.Lloyd@jax.org>
Date: Mon, 24 Oct 2022 13:14:26 -0400
Subject: [PATCH] correct wgs stats script

---
 modules/utility_modules/aggregate_stats_wgs.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/modules/utility_modules/aggregate_stats_wgs.nf b/modules/utility_modules/aggregate_stats_wgs.nf
index bd1cd567..23c08334 100644
--- a/modules/utility_modules/aggregate_stats_wgs.nf
+++ b/modules/utility_modules/aggregate_stats_wgs.nf
@@ -18,6 +18,6 @@ process AGGREGATE_STATS {
   log.info "----- Generating Summary Stats for: ${sampleID} -----"
 
   """
-  python ${projectDir}/bin/wes/aggregate_stats_wes.py ${sampleID}_summary_stats.txt ${filter_stats} ${picard_met} ${algn_met} ${cov_met}
+  python ${projectDir}/bin/wgs/aggregate_stats_wgs.py ${sampleID}_summary_stats.txt ${filter_stats} ${picard_met} ${algn_met} ${cov_met}
   """
 }