v0.9.2 - Release for I2K workshop

What's Changed

• I2k workshop docs - setup tutorial by @TimMonko in #92
• I2k workshop docs - now with example pipeline tutorial by @TimMonko in #93
• I2k workshop docs - update index and readme by @TimMonko in #94
• I2k workshop docs - add downloads and workflow tutorial by @TimMonko in #95

Docs will continued to be updated, but will automatically update the main branch sufficiently for the purpose of the workshop

Full Changelog: v0.9.1...v0.9.2

v0.9.1

What's Changed

• Measure container pivot and fix region issue by @TimMonko in #89

Full Changelog: v0.9.0...v0.9.1

v0.9.0

What's Changed

• nImage class on top of bioimage for convenience functions by @TimMonko in #86
• add multi-label support to measure container by @TimMonko in #87
• new revamped image utilities widget by @TimMonko in #88

Full Changelog: v0.8.4...v0.9.0

v0.8.4

What's Changed

• add reader to napari-ndev by @TimMonko in #85

Full Changelog: v0.8.3...v0.8.4

v0.8.3

What's Changed

• add support for Python 3.12 by @TimMonko in #73
• create widgets module and move files by @TimMonko in #77
• Clarify license and deps by @TimMonko in #78
• remove aicsimageio entirely switch to napari-bioio along with bioio changes by @TimMonko in #83
• Update test_and_deploy.yml by @TimMonko in #84

Full Changelog: v0.8.2...v0.8.3

v0.8.2

What's Changed

• Update measure container and add a new test by @TimMonko in #66
• Add more examples, including Measure Widget usage by @TimMonko in #67

Release matches BINA (Bioimaging North America) Presentation/Poster in September 2024.

Full Changelog: v0.8.1...v0.8.2

v0.8.1

What's Changed

• Exclude /docs and /_tests from source distribution by @TimMonko in #61
• Exclude /docs and /_tests from distribution by @TimMonko in #62
• Workflow widget update by @TimMonko in #63
• Add morphology functions and tests by @TimMonko in #64
• Image Utilities Example by @TimMonko in #65

Full Changelog: v0.8.0...v0.8.1

v0.8.0

What's Changed

This is probably the biggest release and update to the plugin so far. There is now documentation/docstrings for all classes and function. And now a website for this documentation that will automatically be updated as new code gets released.

In addition there is an entirely new widget in the form of Measure Widget! Select a label and measure it with scikit-image regionprops(), optionally add any number of intensity channels. Use regex to get information from either the id_string (filename, typically) or from scene information!) Later, go to the grouping tab and count and group aggregate functions based on identifiers of interest.

There is also now an overhaul of image utilities, attempting to incorporate bioio and phase out aicsimageio. This widget now shifts "open next" to "select next" to allow more graceful concatenation of images without viewing.

Major

• Add measure_container aka Measure Widget by @TimMonko in #52
• Ruff linting by @TimMonko in #53
• Getting codecov hooked back up by @TimMonko in #54
• Mkdocs by @TimMonko in #55
• Image utilities update by @TimMonko in #59
• Groupby measure widget by @TimMonko in #60

Minor

• Update deploy_docs.yml by @TimMonko in #56
• Update deploy_docs.yml by @TimMonko in #57
• Trying to fix build permissions for docs by @TimMonko in #58

Full Changelog: v0.7.1...v0.8.0

v0.7.1

What's Changed

• Image utility changes by @TimMonko in #50
• Apoc fixes by @TimMonko in #51
• Update tests to not depend on viewer and fix tests after removal of old widget attributes
• Updates APOC container with many features, and integreates custom feature widget

Full Changelog: v0.7.0...v0.7.1

v0.7.0

What's Changed

• Optimizations in library load time by @TimMonko in #46
• Large Refactor of Utilities by @TimMonko in #47
• Tabbing and plugin changes by @TimMonko in #48
• Combine RescaleBy into ImageUtilities and deprecate the former
• Image overview, a way to get easy png overviews of images and labels by @TimMonko in #49

Full Changelog: v0.6.7...v0.7.0