From 7c0faa88504570082af09949caebd176ec4f5983 Mon Sep 17 00:00:00 2001 From: Gaurav Vaidya Date: Fri, 12 Jan 2024 01:09:56 -0500 Subject: [PATCH] Added release information. --- releases/README.md | 6 +++++ releases/TranslatorDecember2023.md | 42 ++++++++++++++++++++++++++++++ releases/TranslatorOctober2023.md | 6 +++++ 3 files changed, 54 insertions(+) create mode 100644 releases/README.md create mode 100644 releases/TranslatorDecember2023.md create mode 100644 releases/TranslatorOctober2023.md diff --git a/releases/README.md b/releases/README.md new file mode 100644 index 00000000..a75ce391 --- /dev/null +++ b/releases/README.md @@ -0,0 +1,6 @@ +# NameRes Releases + +## Translator Releases + +- [October 2023](TranslatorOctober2023.md) +- [December 2023](TranslatorDecember2023.md) \ No newline at end of file diff --git a/releases/TranslatorDecember2023.md b/releases/TranslatorDecember2023.md new file mode 100644 index 00000000..f361df9d --- /dev/null +++ b/releases/TranslatorDecember2023.md @@ -0,0 +1,42 @@ +# NameRes Translator October 2023 Release + +- Babel: [2023nov5](https://stars.renci.org/var/babel_outputs/2023nov5/) +- NameRes: [v2.3.11](https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.11) + +Next release: _None as yet_ + +## New features +* The `/lookup` endpoints now: + * Have an `exclude_prefixes` field that allows prefixes to be excluded (e.g. `UMLS|NCI`). + * Have an `autocomplete` flag. When set to true (the default), NameRes assumes that the search phrase is incomplete + (i.e. a search for `bloo` is expanded to `(bloo) OR (bloo*)` so that we can match `blood`). If set to false, the + search phrase is assumed to be complete (i.e. only `bloo` will be searched for), which should provide better results + when NameRes is used as an named-entity linker by Translator components. + * Report a score for every result. +* Fixed bugs in [GET `/reverse_lookup`](https://name-lookup.test.transltr.io/docs#/lookup/lookup_names_get_reverse_lookup_get) + and [POST `/reverse_lookup`](https://name-lookup.test.transltr.io/docs#/lookup/lookup_names_post_reverse_lookup_post). + Also changes the `/reverse_lookup` return format to include additional information, such as the preferred label and Biolink type. +* Added a [GET `/status`](https://name-lookup.test.transltr.io/docs#/default/status_get_status_get) endpoint to + report on Solr database. +* OTEL/Jaegar telemetry added. +* Minor fixes to Terms of Service and service description. +* Minor fixes to NameRes database builder. + +## Releases since [Translator October 2023 release](TranslatorOctober2023.md) + +* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.7 + * fixes reverse lookup get endpoint. by @YaphetKG in #102 +* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.8 + * Fix Terms of Service and service description by @gaurav in #114 + * Return entire document in reverse lookups by @gaurav in #115 + * Report scores for reverse lookup by @gaurav in #116 + * Add exclude_prefixes parameter to /lookup endpoints by @gaurav in #117 + * Add an autocomplete flag by @gaurav in #118 + * Added a /status endpoint that tells us about this NameRes instance by @gaurav in #119 + * Added instruction to make data/synonyms directory in target data/synonyms/done by @gaurav in #123 +* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.9 + * Otel instrumentation by @YaphetKG in #121 +* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.10 + * Update server.py by @YaphetKG in #130 +* https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.11 + * Incremented version that I forgot to do in Name Resolver v1.3.10. \ No newline at end of file diff --git a/releases/TranslatorOctober2023.md b/releases/TranslatorOctober2023.md new file mode 100644 index 00000000..d6140cd9 --- /dev/null +++ b/releases/TranslatorOctober2023.md @@ -0,0 +1,6 @@ +# NameRes Translator October 2023 Release + +- Babel: [2023aug](https://stars.renci.org/var/babel_outputs/2023aug3-with-drugs/) (roughly Babel [v1.1.0](https://github.com/TranslatorSRI/Babel/releases/tag/v1.1.0)) +- NameRes: [v1.3.6](https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.6) + +Next release: [December 2023](TranslatorDecember2023.md) \ No newline at end of file