viz.yaml

vizlab: "0.3.10"
info:
  id: gage-conditions
  name: USGS Gage Conditions
  date: 2018-06-11
  publish-date: 2019-06-25
  path: /gage-conditions
  analytics-id: # WE WILL NEED TO FILL THIS IN AT SOME POINT
  description: Map of all USGS gages and their conditions.
  required-packages:
    vizlab:
      repo: github
      version: 0.3.10
      name: USGS-VIZLAB/vizlab
      ref: v0.3.10
    bit64:
      repo: CRAN
      version: 0.9-7
    dataRetrieval:
      repo: CRAN
      version: 2.7.3
    dplyr:
      repo: CRAN
      version: 0.7.4
    tidyr:
      repo: CRAN
      version: 0.8.1
    sp:
      repo: CRAN
      version: 1.2.7
    sbtools:
      repo: CRAN
      version: 1.1.6
    geojsonio:
      repo: CRAN
      version: 0.6.0
  contributors:
    -
      name: Lindsay Carr
      email: lcarr@usgs.gov
      affiliation: U.S. Geological Survey
    -
      name: Jordan Read
      email: jread@usgs.gov
      affiliation: U.S. Geological Survey
parameter:
  - id: plot_monthday
    monthday: "05-01"
  - id: plot_year
    year: 2018
  - id: block_size
    size: 10
  - id: discharge_percentiles
    percentiles: ["05","10","20","25","50","75","80","90","95"]
fetch:
  - id: dv_sites
    location: cache/dv_sites.json
    reader: json
    fetcher: dv_sites
    scripts: [scripts/fetch/dv_sites.R]
    depends:
      year: plot_year
  - id: site_stats # took about 20 min for all time
    location: cache/site_stats.json
    reader: json
    fetcher: site_stats
    scripts: [scripts/fetch/site_stats.R]
    depends:
      sites: dv_sites
      block_size: block_size
      percentiles: discharge_percentiles
  - id: dv_data # took about 45 min for 1 yr
    location: cache/dv_data.json
    reader: json
    fetcher: dv_data
    scripts: [scripts/fetch/dv_data.R]
    depends:
      year: plot_year
      sites: dv_sites
  -
    id: dv_sites_svg
    location: cache/site_coords.tsv
    mimetype: text/tab-separated-values
    reader: tabular
    scripts:
    comment: Needs map_preprocess.yml to exist.
    
process:
  - id: dv_stats
    location: cache/dv_stats.json
    mimetype: application/json
    reader: json
    processor: dv_stats
    scripts: [scripts/process/dv_stats.R]
    depends:
      year: plot_year
      monthday: plot_monthday
      site_stats: site_stats
      data: dv_data
      percentiles: discharge_percentiles
  - id: dv_sites_sp
    location: cache/site_locations_sp.rds
    reader: rds
    processor: sites_to_sp
    scripts: [scripts/process/spatial_utils.R]
    depends: 
      sites: dv_sites
  - id: dv_stats_svg_coords
    location: cache/dv_stats_svg_coords.json
    mimetype: application/json
    reader: json
    processor: combine_locations_data
    scripts: scripts/process/combine_locations_data.R
    depends:
      sites_sp: dv_sites_sp # only here so that this gets re-run if that changes. but preprocess won't so it doesn't actually matter.
      sites_svg: dv_sites_svg
      sites_data: dv_stats
      
visualize:
publish:
  - 
    id: viz_page
    name: index
    publisher: page
    template: fullpage
    depends: 
      header_css: lib-header-css
      footer_css: lib-footer-css
      content_css: lib-content-css
      header: header_section
      footer: footer_section
      figure_section: figure_section
      dv_info: dv_stats_svg_coords
    context:
      resources: [header_css, footer_css, content_css]
      sections: [figure_section]
  -
    id: header_section
    template: header-template
    publisher: header
    depends: lib-header-css
    context:
      title: "U.S. Geological Survey Gage Conditions"
  -
    id: footer_section
    template: footer-template
    publisher: section
    depends: lib-footer-css
    blogsInFooter: FALSE
    github-url: https://github.com/USGS-VIZLAB/gage-conditions
    vizzies: FALSE
  -
    id: figure_section # need this so that d3 code gets run after d3 has been loaded
    template: layout/templates/main_fig.mustache
    publisher: section
    depends:
      script: bundle_js
      initial_svg: svg_state_map
    context: 
      initial_svg: initial_svg
      script: script
  - 
    id: svg_state_map
    location: cache/state_boundaries.svg
    mimetype: "image/svg"
    publisher: inline_svg
    scripts: scripts/publish/inline_svg.R
  -
    id: bundle_js
    relpath: js/bundle.js
    mimetype: application/javascript
    publisher: webpack